Xenopus laevis (African clawed frog): 108695314
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Entry
108695314 CDS
T01010
Symbol
chd7.S
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108695314 (chd7.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108695314 (chd7.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
CHDCT2
HTH_CHD1_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
108695314
NCBI-ProteinID:
XP_018079239
Xenbase:
XB-GENE-17333767
UniProt:
A0A1L8FT46
A0A974CL81
LinkDB
All DBs
Position
6S:102701982..102810517
Genome browser
AA seq
2995 aa
AA seq
DB search
MADPGMMSLFGEDGNLFSEGLEGLGECGYPENPVNSMAQQMPMDQGFGALQSPLHHSTSN
QNQSKLTHFDHYNQYEPQKMHMIDQPNRMMANTSGNGIASPHSQYHNTPVPQVPHGGGQM
GVYPGMQNDRHGPSFVDNGSMWGPRAVQVPEQIRPSYQQQSQQQPPAPSGPQGSPHHQHV
QQMGNYMVRGDFSMQQHGPLQSQRMNQFSQGQEGLNQGNPFLGAAGPGHLSHVPQQNPNM
GSSLRHTVQQFHHHSPTTHHGESVAHSPRFSPNPSQQSSVRPQSLNFNSRNQTVPSPTLN
NSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMTPSVPRYPNTVGFPSNNSQGLMHQQ
PIHPSGSLNQMNPQTMHPSQPQGTYASPPPMSPLKAMSNPAGTPPPQVRPGSAGIPMDVG
SYPNMPHPPPTHQPPGSMAMGQRNIGPRNIQQSQAFMGMSSAPREMGGHMRPNGCPGVSH
ADPQAIQERMMSGQQHPGHQSFQQQMANCQPHPAMHHQSSPPSHSHHQPWTSLHQSPQNT
PQKVPVHQHSPSESFLDNSIPDMTRISGPNASLISTEDFLPSMQSQTPQKKRKKKNNHIA
TDKTVEGFGLEGFPGENPDLLIEGAPDGKKKKKPKVKKEPKEPKEPKQPKEPKAKKEPKE
PKAPKPPKLPKEPKEKKVKSTTPKPKANKKTSNKSDAEGSAQKKKVNKVKPEGVEPSDLD
KTPTPSSSPPPAPPPPPEEEDDSGVQKRRSSRQVKRKRYTEDLEFKISDEELDDADGRDS
PSEQQDGLDAEGPVVEKIMSCRLTNKQQESGEEVATEEFYVKYKNYSYLHCHWATVEELE
KDKRIQQKIKRFRAKQGQNKFLSEIEDDLFNPDYVEVDRILDVAPSTDENGEPVCHYLVK
WCSLPYEDSTWELKQDLDQAKIEEFEKLQSREPETERVQRPPADDWKKSESSREYKNNNS
LREYQLEGVNWLLFNWYNKRNCILADEMGLGKTIQSITFLYEIFLKGIHGPYLVIAPLST
IPNWEREFHTWTELNVVVYHGSQASRKTIQHYEMYFKDPQGKIIKGAYKFHAIITTFEMI
LTDCPELRNINWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSL
LNFLEPDRFPSESNFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIE
VELTNVQKKYYRAILEKNFAFLSKGGGGSHANVPNLLNTMMELRKCCNHPYLIKGAEEKI
LEEFRETHNCDPSDFQLQAMTQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDY
LIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFD
SDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR
ENATNGVQQLSKKEIEDLLRKGAYGALMEEEDEGSKFCEEDIDQILSRRTHTITIESEGK
GSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDLEVLNGRNTLVIDTPRVRKQTRLF
SAVKEDELMEFSDMESDSEDRPTIRPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDIL
SHGRFKRQLSEQDVETICRTILVYCLNHYRGDENIKGFVWDLITPTEDGQTRALVNHSGL
SAPVPRGRKGKKVKSQNSQPVLKHADWLQSCNPDALFQEDSYKKHLKHHCNKVLLRVRML
YYLRQEVIGDQADRILEGADSSEVDVWIPEPFHAEVPTDWWDNEADKSLLIGVFKHGYEK
YNSIRADPALCFLERAGMPDAKAIAAEQRGTDMLADGGDGGDFDREDEDPEYKPARLPFK
DDIDEFANSPMEDKEECLEMNPTGKSGEGSTELGHLYWPNTSALTTRLRRLITAYQRSYK
RQQMRQDAQMKIDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVSTFGVIF
DHAKQKLDWNQFRAYARLDKKSDESLEKYFSCFVAMCRRVCHMGTKPEEDICDLSMMIEP
ITEERASRTLYRIELLRKIREQVLNHPQLNERLKLCQPSIDLPEWWDCGKHDRDLLVGAA
KHGVSRTDYHILNDPEFSFLEAHRSFAQNRGSSQPSNLPILIPPEPGYSDTPPIMPSTPN
PDVKGSGNEEVKTEEVKTEDVKTEEVKTEKGEDLAIKEESGIKEEQAADTAEKSIIQESD
PEAVTIKEEMKMAEETPVGPKSISEKGSEEDDEKLDYDDKSEESSQAEVGISSQDKNFDE
ESNASLSTARDETRDGFFLEDGDQSGLHMLRERTFSFSFWPKDRVIINRLDNICEAVLKG
KWPVNRRQMFDFPGLLPGYTPTAVDSPLQKRSFAELSMVAQGNYSGSEDISASPQLSQET
SLSLSVPRQRRRRRRKIEVEAERAAKRRNLMEMVAQLRGSQMGAENGQEKVVDLSNASRE
VTSSTSSFPSLTSQFLLNNSSTPVSDAFKTQMERLQAGLSCTPTRHLLNGSLIDGEPPMK
RRRGRRKNVEGLDLLFMSNKRTSSSVDETDVTKAYDEDIETPPTRNIPSPGQLEPETRIP
VINLEDGARLAGEEAPKNKDLVEWLKLHPTYTVDMPSYVPKTADMLFSHFEKPKQKRHRC
RNPNKLDINTLTGDERVPVVNKRNGKKMGGAMAPPMRDLPRWLEENPEFAVAPDWTDIVK
QSGFVPDSMFDRLLTGPVIREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLF
AGMDLASLQNLQNLQSLQLAGLMGFPHGLAAAAAAGGDSKNAAAMLPLMLPGMAGLPNMF
GLGGLLNNPLAAGSSNSTTASSQGETEDGTSKADEKKTETEEDAKDSEKTDTVSATEAGS
VGAATTTAGLSANALAFSPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPSLAGLQSAVSS
SEEKAADDCENQEPSDAEESMDKTADSSILEDETAQGEEGESPDGEDELDNETDK
NT seq
8988 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccctggcatgatgagtttatttggagaggatgggaacctgtttagtgaagga
ttagaaggtctaggtgaatgtggttacccagaaaatcccgtaaattccatggcacagcaa
atgcctatggaccaaggatttggtgcactgcagtcaccgctccaccacagtacaagcaat
cagaaccagtctaagctgacacattttgatcactataaccaatatgaaccacaaaaaatg
cacatgatagaccagccgaacagaatgatggcaaacacttctggaaatggtattgcctct
ccacattcacagtatcacaacacacctgttcctcaagtcccccatggaggtggccaaatg
ggcgtgtaccctggtatgcagaatgaccgacatggcccatcttttgtggacaatggctct
atgtggggacctagggctgtgcaggtgccggagcagataagaccatcttaccagcagcag
tcacaacagcagccaccagcaccttccggaccacaaggttcacctcaccatcaacatgtt
caacagatgggaaattacatggtgcgaggagatttttcaatgcaacaacatggtccacta
cagtcacaaaggatgaatcagttttcacaagggcaagagggtcttaatcagggaaatcct
ttccttggtgctgcaggaccaggtcatttgtcacatgtgccccagcaaaatcctaacatg
ggatcttctctacgtcatacagtacaacaatttcatcatcattcccccactactcaccat
ggagaatctgttgctcatagtcctagattttcacctaatccttctcagcagagttcagtg
aggccacagtcccttaattttaattctcgtaaccagactgtaccttcacccacattaaac
aactcagggcagtattcccgctatccttatagtaaccttaatcagggattagttaataat
acagggatgaatcagaatttaggccttacaaacaacactccaatgactccatctgtacct
agatacccaaatactgtggggtttccatcaaataatagtcaaggactgatgcaccagcaa
cctattcatcctagtggctcacttaaccaaatgaacccacaaactatgcatccttcacag
cctcagggaacctatgcttctccacctcccatgtcaccactgaaagcaatgagtaatcca
gcaggtacccctccaccacaagttcgacctgggagtgctgggatacctatggatgttgga
agttacccaaatatgccccatcctcctccaactcaccagccccctggcagcatggctatg
ggccaaaggaatatcggccctagaaacattcagcagagtcaggccttcatgggtatgtcc
tcagcaccaagggagatgggtgggcacatgagaccaaatggctgtcctggagttagccat
gcagatccacaggcaatacaagaaaggatgatgtctggtcagcagcatcctggtcatcaa
tcttttcaacagcaaatggcaaactgtcagcctcatccagctatgcaccatcagtcttca
cctccgtcacattctcatcaccaaccatggacttcgcttcatcagtcacctcagaacacc
cctcagaaagtgcctgtccatcagcattcaccatcggaatctttccttgataactctatc
ccggatatgactcggataagtggccctaatgcttctttaataagcacagaagatttcttg
ccatcaatgcagtcccagacaccgcaaaagaaaaggaagaaaaaaaacaaccacattgcc
actgataaaactgttgaagggtttgggttggaaggtttccctggggaaaaccctgacctc
ttaattgaaggagcaccagatggaaagaagaagaaaaaacctaaagtcaaaaaggagccc
aaggagccaaaagagcccaagcagccaaaagagcccaaagcaaagaaagagccaaaggaa
cctaaggctcctaaaccacccaagcttcccaaagagccaaaagagaaaaaggtgaagagc
acaacgcctaaaccaaaggcaaacaagaagaccagcaataagtcagatgcagagggcagt
gctcagaagaaaaaagttaacaaagtaaaaccagaaggggttgaaccttcagatttggat
aaaaccccaaccccttcttcttctcctcctcctgcaccaccaccaccacctgaagaagaa
gatgactctggagtacagaaaagacgctccagcaggcaagttaaaaggaagcgctacact
gaagacctagaatttaaaatttcagacgaagagcttgatgatgcagatggtagagactct
ccttcagaacaacaggatgggctggatgctgaaggaccagtggtggagaaaatcatgagt
tgccgattaacaaacaaacagcaggaatctggtgaagaggtagcgacggaagagttctat
gtgaaatataagaactactcatatttgcactgccattgggccactgtggaagaactggaa
aaagacaagaggatccaacagaaaataaaacgatttagggcaaagcaagggcaaaacaag
tttctttcagagattgaggatgatctctttaatcctgactacgttgaagttgataggata
ctggatgtggctcccagcacagatgaaaatggagagcctgtgtgtcactatctggtgaaa
tggtgctccctcccgtatgaagacagcacttgggaactgaagcaggacttggatcaagca
aagattgaagaatttgagaaacttcagagcagggagccagaaacagagcgcgtgcagcga
cctcctgccgatgactggaagaaatctgagagttccagggagtataaaaataataacagt
ctcagggaataccagttggagggagtaaactggctgctgttcaattggtacaacaaacga
aattgcattttagcagatgaaatgggcttagggaagactattcagtcgatcactttcctt
tatgagatattcttaaagggaattcatgggccctatttggtcattgccccgctgtcaaca
atcccaaactgggaaagggagtttcacacttggacagaactgaatgtggtagtttatcat
gggagtcaagcaagcaggaaaacaattcaacattatgaaatgtacttcaaggatccacag
ggaaaaattataaaaggggcatacaagtttcatgcgatcattacaacatttgaaatgatt
ctaactgactgccctgagctcaggaacatcaattggcgatgcgtggttatagatgaggct
catcgactgaagaacaggaactgtaagcttttggaaggcctgaaaatgatggatttggag
cacaaagtgctgctaacaggaactccgttacaaaacactgtggaagaactttttagtttg
ctgaactttttggaaccagaccgttttccttcagagagcaatttcatgcaagaatttggt
gatctgaaaactgaagaacaggtgcaaaagctccaaggcattctaaaaccaatgatgttg
aggcgcctcaaggaagatgtggaaaagaatctggccccaaaagaagaaactataattgaa
gtagagctgacaaatgttcagaagaaatattatcgtgcaattcttgagaagaactttgct
ttcctctccaagggtggaggaggtagtcatgcaaatgtccctaatcttttaaacactatg
atggaactccgaaaatgctgcaatcatccttaccttataaaaggtgctgaagagaaaatt
ttggaggagtttagagaaacgcacaattgtgacccttcagattttcagctccaggcaatg
acccaagccgccggcaaactagttttgattgacaagctgctgccaaagcttaaggctggt
ggccacagggtgcttatcttctcacagatggtgcgttgcttggacatactggaagactac
ctcattcaacgaaggtatccatatgagagaattgatggcagagtaagaggcaaccttcgt
caggctgctattgatagattttccaaacccgattctgataggtttgtgttcctgctatgt
acaagggcaggaggtctgggcattaatttaactgctgctgatacttgcattatctttgat
tctgactggaacccccagaatgaccttcaggctcaagctcgatgtcatagaataggccaa
agtaagtccgtgaaaatttacagactgatcacccgaaattcctatgagagggagatgttt
gataaggccagtttaaagcttgggctggataaagcagtcttgcagtccatgagcggaaga
gaaaatgctaccaatggggtgcaacagctatccaaaaaagaaatagaagacctgctgaga
aaaggtgcttatggagcactaatggaagaagaagatgaaggctctaagttctgtgaagaa
gatatagatcagattctctcccgtcgcactcatacaataacaatagagtctgaaggaaag
gggtccacatttgcaaaggctagttttgttgcatctggaaacaggacggacatttctcta
gatgatcccaatttctggcaaaaatgggcaaagaaagctgaactggatcttgaggtgctg
aatggaaggaacactttagtaatcgacacaccacgggtaagaaagcagaccagactgttt
agtgcagtgaaggaggatgagctcatggaattttctgatatggagagcgattctgaggac
agaccaactatcagaccacgtaggcctcaggataaatctcagggctatgcaagaagtgaa
tgtttcagagtggagaagaatcttctagtatatggatggggccgatggacagacatactc
tcacatggccgattcaaacgtcagctttcggagcaagatgtggaaaccatctgccgcacc
attctggtttactgtctcaaccattacagaggggatgaaaacatcaaaggtttcgtatgg
gacctgattacaccaacagaagatggacagacaagagctttggttaatcactcaggtctc
tctgctcctgtgcccaggggaaggaaaggcaagaaagtaaaaagccagaattcacagcct
gtgttaaagcatgcagactggcttcagagctgtaaccccgatgccttgtttcaagaggat
agctacaaaaagcacctgaagcatcactgtaacaaggtcctgctgcgtgtccgcatgctc
tactatttgaggcaagaagtgatcggggaccaagccgacagaatcttggagggtgctgac
tcaagcgaggtagatgtgtggattccagagcccttccatgctgaggttcctaccgactgg
tgggacaatgaagccgacaaatcccttttgattggtgtcttcaagcatgggtacgaaaaa
tacaattctattcgggccgaccctgctctgtgcttcctagagagagctggtatgccggat
gctaaggcaattgctgctgaacagcgaggaacagatatgttggcagatggtggagatggg
ggtgactttgatagagaggatgaagatccagaatacaaaccagcaagactgccatttaag
gatgacattgatgaatttgctaattctcccatggaggataaagaagaatgtctagaaatg
aaccctacaggaaaatctggtgaaggcagcacagagttaggtcatttgtactggcccaac
acttcagccctaaccacccgccttcgacgcctcatcactgcttatcagcgcagttataaa
aggcaacaaatgaggcaagatgcacaaatgaagatcgatcgccgtaggcggcgtcctcgg
gaagaagtaagagccctggaagctgaaagagaagcaataataacagaaaaacgccaaaag
tggacaaggagagaagaggcagatttttatcgtgtagtatctacgtttggagttattttt
gatcatgccaaacaaaagcttgactggaatcagttcagagcttatgcccgcttggataaa
aaatctgatgagagcttggaaaaatactttagctgctttgtggctatgtgtaggagagtt
tgtcatatgggaactaaacctgaagaagatatctgtgatctctctatgatgattgagcct
ataacggaagaacgtgcatcaagaactctctatcgtattgagcttttaaggaaaataagg
gagcaagttcttaatcaccctcaactgaatgagcgtcttaaattatgtcagccaagtatt
gatttgccagagtggtgggactgtggaaaacatgatagagatttgcttgttggtgcagca
aagcatggtgtcagtaggacagattatcacatactaaatgatccagaattctcttttctg
gaagcccacaggagttttgctcagaacagagggtcttcccagccaagtaacttgcctatt
ttaattccacctgaacccggttacagtgacactccacctataatgccttctacccctaat
ccagatgtaaaaggatcaggtaatgaggaagtaaaaaccgaggaggtaaaaaccgaggat
gtaaaaaccgaggaggtaaaaactgagaagggtgaagatcttgcaattaaggaagaatcc
ggcattaaagaagaacaagcagcagacactgctgaaaagtctataatacaggaaagtgat
cctgaagcagtcactattaaagaggaaatgaaaatggcagaagagactccagttggtccg
aaatccatttcagaaaaaggctcagaggaagatgatgaaaagttggattatgatgacaaa
tctgaagagtcctcccaggcagaagtgggtatttcatctcaggataagaactttgatgaa
gaaagcaatgcttccttgagtactgcccgtgatgaaaccagagatggattctttttggag
gatggagaccaatctgggttgcatatgcttcgtgagaggaccttctctttctctttctgg
cccaaggaccgtgtaattatcaaccgattagacaacatctgtgaagctgtgctgaaagga
aagtggccagtaaacagacggcagatgtttgacttcccaggactcctccctgggtacaca
ccaactgctgtggacagccccttgcaaaagagaagctttgctgagctctccatggtggct
cagggcaactatagcggcagtgaagacataagtgcttcaccgcaactctcccaggaaact
tcactgagtttatctgtgccacgtcagcgaagacgaaggagaaggaagattgaggttgag
gcagagcgcgctgccaagagaaggaatcttatggagatggtagctcagctgagagggtct
caaatgggagcagaaaatggacaagaaaaagttgtagatttatcaaatgcctccagggag
gttacaagttctacctcaagttttccatctcttacttctcaatttctgttaaataattca
tccaccccagtctctgatgcctttaaaactcaaatggagcgactgcaggcaggtctttca
tgcacacctacaaggcatctgctcaatggctctttaattgatggagaacctcccatgaaa
aggcgaagaggaagaaggaaaaatgttgaaggcctagatcttttgtttatgagtaacaaa
aggacttcatcatctgtggatgagactgatgtgaccaaagcctatgatgaagatatagaa
acaccgccaactagaaacattccatctcctggacagttggagccggagacccgtatccct
gtcattaacctggaagatggggccaggcttgcaggggaagaagcccccaaaaacaaagat
ctagttgaatggttaaagttacatcctacgtacactgttgatatgccaagttatgtacca
aagactgcagatatgttgttctctcactttgaaaagcctaaacagaagcgacaccgatgt
cgaaatccaaacaaattggacattaacacgctgacaggagatgaaagggtgcctgtggtg
aacaaacgcaatgggaaaaaaatgggaggagccatggcaccacctatgagagaccttcca
cgatggctggaagaaaatccagaatttgcggttgctccagactggactgatatcgtaaaa
caatctggtttcgtaccggattcaatgtttgatcgtcttcttactgggcctgtaattaga
gaagaaggggctagcaggagaggaagaaggcccaaaagtgaaattgccaaagcagctgca
gctgctgctgctgtagcctcgacatctggaatcaacccattgctgatgaatagtttattt
gctggaatggatcttgctagccttcagaatctccagaatctgcagtctctccaacttgct
ggtctaatggggtttccccatgggcttgcagcagctgctgccgctggaggtgattctaaa
aatgctgctgccatgctgcctttaatgctgcccggcatggcgggattgccgaacatgttt
gggcttggtggacttttgaataaccccttagcagctggcagcagtaattccactacagct
tccagtcaaggagaaactgaggatggcacttcgaaggctgatgagaagaagacagaaact
gaagaggatgctaaagactctgagaaaacagatactgtttctgctactgaagctggatct
gttggtgctgctactaccacagctggattgtctgcgaatgcgctggccttcagtcccttc
ctactctccacaatggctccaggcctgttctacccatccatgtttctaccgcctggttta
ggaggattgacactaccgggtttcccatcactagctggacttcagagtgctgttagctct
agcgaagaaaaggctgctgacgactgtgagaatcaggaaccgagcgacgcagaggagagc
atggataaaacggccgattcatctattttggaagatgaaacggcacaaggagaagaaggg
gagtccccagatggggaagatgaattggacaatgaaaccgataaataa
DBGET
integrated database retrieval system
