Xenopus laevis (African clawed frog): 108695323
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Entry
108695323 CDS
T01010
Symbol
trim55.S
Name
(RefSeq) tripartite motif-containing protein 55
KO
K10654
tripartite motif-containing protein 55
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108695323 (trim55.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108695323 (trim55.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108695323 (trim55.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
108695323
NCBI-ProteinID:
XP_018079250
Xenbase:
XB-GENE-17342572
UniProt:
A0A974CLI0
A0A1L8FT89
LinkDB
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Position
6S:104417021..104472476
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AA seq
435 aa
AA seq
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MSTSLQYKTFSKEQQTMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGNTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPERKSD
HPMCDEHEDEKINIYCLNCEVPTCSMCKVFGAHKDCEVAPLTQVFQRQKSELSDGIAILV
GCNDRIQAVVSQLEETCKTVEENSKRQKEQLCERFDFLFAILEERKGELTQAITRDQEER
LESVRSLMKKYGSHMETVSKLVESGIQFMDEPEIAVFLQNSKPLLQKMTEASSELHMEKV
EAGYENMNHFTVDLNREERIIREIDFYREEEEEEEEEEDTAAEGEDGDGVHTEGEEDVAE
KGAQTSQLNKTDITAERLPPPPELELSTPSVPAPQNETVVSVQGEAQEQTGANQPDSPAD
AKHVFSFTWLNTVPK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctcattgcagtacaagacattctccaaagagcagcaaactatggataatcta
gagaagcaactcatatgtccaatatgcctggaaatgttctccaaacctgtggtcatactt
ccctgccagcataatctgtgtaggaaatgtgcaagcgatatattccaggcttccaatccg
tatttgccaacacgaggagggaacacagtagcatcaggtggacgttttcgttgcccatca
tgtagacatgaagtggttttggacagacatggggtatatggactacaaaggaacttactg
gttgaaaatattattgacatttataaacaggaatctacaaggcctgaaaggaagtcggac
cacccaatgtgtgatgagcacgaagatgaaaaaattaacatatattgtcttaactgtgaa
gtccctacctgctccatgtgcaaagtgtttggagcacacaaggattgtgaggttgctcct
ttgacacaagttttccaaagacaaaagtctgaactctcagatggcattgcaatactggtt
ggatgtaacgacagaattcaggcagtagtaagccaactggaggagacttgtaaaaccgtt
gaggaaaatagtaaaaggcaaaaagaacaactatgtgaacgatttgatttcctgtttgct
attctggaagaaagaaaaggggagctgacccaagcaatcaccagagaccaagaagaaagg
cttgaaagtgtccgttctttaatgaaaaaatatggcagccacatggagactgtttcaaag
cttgttgagtcaggaattcagtttatggatgagccagaaatagcagtattcctacagaat
tctaaacccttgctacagaaaatgacagaagcatcaagtgaacttcatatggaaaaagta
gaagctggatatgaaaacatgaatcattttacggtggatctaaacagagaagaaaggata
attagagaaatagacttttacagagaagaggaggaagaagaggaggaagaagaagataca
gcagcagaaggtgaagatggtgatggggtccacacagagggggaagaagatgtagcagaa
aaaggtgcacagacatcccagctgaataaaacagatatcacagctgaaagactacctcca
cctccagaacttgagctcagtactccatctgttcctgctcctcagaatgaaactgttgta
tctgtccagggagaagcacaggagcagacaggggcaaaccaaccagatagcccagctgat
gcaaaacatgtcttctccttcacttggctcaatactgtacctaaataa
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