Xenopus laevis (African clawed frog): 108695413
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Entry
108695413 CDS
T01010
Symbol
cthrc1.S
Name
(RefSeq) collagen triple helix repeat-containing protein 1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108695413 (cthrc1.S)
Cilium and associated proteins [BR:
xla03037
]
Other cilia and associated proteins
Stereociliary proteins
108695413 (cthrc1.S)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
108695413
NCBI-ProteinID:
XP_018079396
Xenbase:
XB-GENE-6487331
UniProt:
A0A1L8FTQ1
A0A974HEV3
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All DBs
Position
6S:118131676..118150386
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AA seq
235 aa
AA seq
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MYLLWTSLVLYSSLLLSTHSQPENQKVKQKSLHKKDLDIIERYNGMCVQGAMGPSGRDGT
PGVNGIPGTPGIPGRDGAKGEKGECMRESLEESWTPNFKQCAWSALNYGIDLGKIAECTF
TKMRSHSALRVVFSGSLRLKCKTACCQRWYFTFNGAECSGPLPIEAIIYLDQGSAEFNST
INIHRTSTVEGLCEGISAGLVDVAVWVGTCSDYPRGDASTGWNSVSRIIIEELPK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtatttattatggacaagcctggtgctgtattcaagtctgctgctttctacacactct
cagcctgagaaccagaaggtaaagcagaaaagcctgcacaagaaggacctggatatcatt
gaaagatataatgggatgtgtgttcaaggcgctatgggcccttctggccgagatggaact
cctggtgtgaatgggattcctgggactcctggaattcccggccgtgatggagcaaaagga
gagaaaggggaatgcatgagggagagcctggaagagtcctggactccaaacttcaagcaa
tgcgcctggagtgcattgaattatggcatagacctcgggaaaattgcagaatgtacattt
accaaaatgcgatcccacagtgcactgcgggtggtgttcagtggatcccttcggctcaag
tgtaaaacggcctgctgccagcggtggtacttcacttttaatggagcggaatgctctggg
cctcttcccatcgaggccattatttacttagaccaaggaagtgcagaatttaactccaca
attaacattcatcgaacatcaactgtggagggtctgtgtgaaggaatcagcgccggactg
gtggatgttgccgtctgggtggggacctgttcagactatcctagaggagatgcttctact
gggtggaactctgtgtcacggatcatcatagaggagttaccaaaataa
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