Xenopus laevis (African clawed frog): 108695415
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Entry
108695415 CDS
T01010
Symbol
dcaf13.S
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
108695415 (dcaf13.S)
04121 Ubiquitin system [BR:
xla04121
]
108695415 (dcaf13.S)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
90S particles
Other 90S particles
108695415 (dcaf13.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108695415 (dcaf13.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
eIF2A
Beta-prop_WDR19_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
NBCH_WD40
KNTC1_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
108695415
NCBI-ProteinID:
XP_018079398
Xenbase:
XB-GENE-17343138
UniProt:
A0A1L8FTR7
A0A974HEH9
LinkDB
All DBs
Position
6S:118166893..118195082
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVSREYTRALNATKLERVFAKPFIA
SLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFC
GTSFFTVGDDKTVKQWTMESPGYGEKVEPIRTILGKTVFTGIDHHVKEAVFATCGQQVDI
WDEQRSTPMRSYAWGVDSISSVRFNPIETHILSSCGTDRSIVLYDKRKPTPLKKIILEMR
TNALCWNPMEAFIFTAANENFNLYTYDMRYMDSPVKVHMDHVSAVLDVDYSPTGKELVSA
SFDKSIRIFPVHSGHSREVYHTKRMQHVTCVKWSADNKYVLCGSDEMNIRIWKANASEKL
GVLSPRERAAHNYNQKLKEKFQHHPQIKRITRHRHLPRSIYSQIKEQQIMREARRKKDVN
RRKHSKPGSVPIPSEKKKHVLAVVE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaggttctgtgtaggaacccggacgattatgtgcgagagaccaagagggac
ctgcagagggttcctcggaactatgacccagccctacacccatttgaagtgtctcgggaa
tatacaagagcgttaaatgccaccaagctggagcgtgtctttgccaagccttttattgct
tccctggacggccatagagatggggttaattgcattgctaagcatcccaagagcttatct
accgtgctgtcaggagcatgtgatggagaggttaagatttggaatttgacgaagcgagaa
tgttccagaacaatacaggcacatgatggctttgtgagaggactttgcgtccggttctgt
ggcacctcgttctttacagtgggtgacgataagacggtgaagcaatggacaatggaaagc
cctggttatggtgagaaagtggagcccatacgtacaatcctaggaaagacagttttcaca
gggatcgaccatcatgtgaaagaagctgtttttgccacttgtgggcagcaagtagacatc
tgggatgaacagaggtccactcccatgagatcatatgcatggggggttgatagcatctca
tcagtcagatttaatccaatagagacgcacattttatcaagctgcggaacagacagaagc
attgttctctatgataagcgaaaacctaccccactaaaaaagattattttggaaatgaga
acaaatgctctgtgttggaatccaatggaagcatttattttcactgcagccaatgaaaac
ttcaacctgtacacgtatgacatgcgctatatggacagtccggtgaaggtgcacatggat
cacgtgtcggctgttctggatgttgattactcccctactggaaaggagcttgtgtctgcc
agctttgataagtccatccgtatattccctgtgcatagtggccacagcagggaagtctat
cacacaaagcgtatgcagcacgtcacctgtgttaaatggtctgccgacaacaagtatgtt
ctctgcggctctgacgaaatgaacattcgcatatggaaagccaacgcatcagaaaagttg
ggcgtgttgtcaccacgagaaagagcagcacataactacaaccagaagttgaaggagaag
ttccagcaccacccacagatcaagaggataactcgtcacaggcacctaccacgctccatc
tacagccaaataaaggagcagcaaatcatgagggaagctcgccgcaagaaggatgtaaat
cgtcggaaacacagcaagccgggctctgtgccaatcccatcagagaagaagaagcacgtg
ctggctgtagtggaatag
DBGET
integrated database retrieval system
