Xenopus laevis (African clawed frog): 108695429
Help
Entry
108695429 CDS
T01010
Symbol
col14a1.S
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X2
KO
K08133
collagen type XIV alpha
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
108695429 (col14a1.S)
Proteoglycans [BR:
xla00535
]
Extracellular matrix (ECM) proteoglycans
Others
108695429 (col14a1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
vWA_SIBA-E
Fn3_VIN3
Fn3_nematode
Motif
Other DBs
NCBI-GeneID:
108695429
NCBI-ProteinID:
XP_018079413
Xenbase:
XB-GENE-17334898
UniProt:
A0A8J0T8B8
LinkDB
All DBs
Position
6S:124433357..124541093
Genome browser
AA seq
1778 aa
AA seq
DB search
MKPERNLQTIVLLSFLAVAVFFAIPGQSQVTPPTRMRYHVVSQDSVQISWKDSKDKVKGY
KLLITPKSGGKTNQLNLQNSATKAIIQRLDPDQSYIVQIIAFNEDDESTPVQGEFRLKDL
EKKRKIPEPSKAQKKDKTGNNLSEGENQFSCRTPAVADIVILVDGSWSIGRLNFRLVRLF
LENLVAAFNVASDKTRIGLAQYSGDPRIEWQLDSYSNKDAVIDAVRNLPYKGGNTLTGLA
LTYILENSFKPESGARPGLPKIGILVTDGKSQDDVIPPAKSLKDAGIELFAVGVKNADLN
ELKEIASEPDSSHVYNVADFNVMDTIVDGLTRTVCQRVQEQENDIRGTTVTSVTGSPSEL
VTSEITARGFRVSWTHAPGKVEKYRVVYYPSKGVQPEEVVVDGSVSTTVLKNLMSLTEYQ
LAVFAVYINSAGEGLRGSETTLALPMASDLQLYDVTHRSMRAKWVGVAGATGYMILYAPL
TEGLAADEKEMKVDGSLTDVKLDDLTPNTEYAVTVYAMFGEEASDPLTAQETTLPLSPPR
NIRFTAIGHSSATVSWDHSNKRVNGYRIMYVKTGRAETNDVVVDRVSTYNLKQLSSLTEY
TVAIFSVFDEGESEPLTGTFTTLKVPNPQSLEVGDITTHSFRAYWKQFASDIVMYRLVWT
PLSGGESQEIVLNGDITSHLIDGLTHSTEYKVSLTAIFGDETESDALAAMATTLRRTTTV
ATTAKVTTAVVRLGIRNLLIDDETTSSLQVSWQITDGNIRHYIVTYINPSGAEEERMVPG
RLNEVVLQPLLSDTEYKVTVTPVYFNGEGNSVSASGKTLPLLAPRNLRVSDEWYNRLRIT
WDSPPSPTMGYRIVYKPVNVPGPALETFVGDDINTILILNLLSGTEYSLKVLASYPTGFS
DALTGLGKTLYLGVKDLNAYQIRMRSLCAQWQLHSHAMAYRIIIESLMDGSKQEASLGGG
TSRHCFHELFPNTRYRITVYAQLQEAEGLGVSIVETTLPVPTAEPTLPPTTPPPPTIPVA
REVCKAAKADLVFLVDGSWSIGDDNFNKVIKFLYSTTGALDEIGPEGTQVGIAQFSDDAR
TEFKLNSYKNKDTLLDAIQRISYKGGNTKTGRAIKHVRDDLFTSNSGMRKGVPKVLVVIT
DGRSQDDVNSIAKEIQLDGFSIFAIGVADADYAELVNIGSKPSERHVFFVDDFDAFKKIE
DELITFVCETATATCPWVFIQGNSVSGFKMMEMFDLVQKEYADMEGVSMEPGTFNNFPCY
RLHKDALLSQPTKYIHPEGLPSDYTVSFLFRILPDTPKEPFALWEILNKEYEPLVGVIVD
NGGKTLTYFNYDYKGQFQTITFEGPEVRKIFYGSFHKVHIVITKTTSRLIIDCKQVAEKP
INAAGNITTDGLEVLGRMVRSRGPKDNSAPFQLQMFDIVCTTSWAARDKCCELPAMRDEA
TCPSLPNTCSCAQDSKGVPGPPGPPGGAGMRGPKGAQGESGRAGPEGPRGQTGAPGPQGP
PGPQGPSGLSIQGPPGQQGAKGDKGDVGFQGQQGIPGGSGSPGRDGATGPRGLPGKDGSN
GPPGPPGQMGSPSNPGSPGVPGSTGSQGENGPPGPPGVKGERGERGDTQAHSVVRSIARQ
VCEQIIQNHMSRFNSLLNQIPSQSVSVRAVPGPRGEPGRTGPAGPSGEQGSPGRTGFPGN
PGQPGTPGERGLPGEKGERGNPGVGTQGPRGPQGPAGPPGEGRTGSQGPAGQPGQRGLPG
PQGIPGSTGSTGQPGYCDPASCAGYGVEGLIPYNDYQP
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggaacggaacttgcagacaatcgtattgctgtcatttttagcagtcgccgta
tttttcgccatccctgggcaaagtcaagtgactccgccaacaaggatgagataccacgtt
gtgtcccaggacagtgtacagatttcatggaaagattccaaagataaagttaaaggatat
aaacttcttatcacacccaaatcaggtgggaaaaccaaccaactgaatcttcaaaactcc
gctaccaaagccatcattcaaagacttgatcctgatcagagttatattgtgcagatcatt
gcatttaatgaagacgatgaaagcacaccagttcaaggggagtttagattgaaagattta
gagaaaaaaagaaaaattcccgaaccaagcaaagcccaaaagaaggataaaactggcaac
aatctttccgaaggagaaaatcagttttcatgtagaaccccagcggttgccgacattgtg
attctggtggatggatcatggagcattggccgactcaacttcaggcttgtgcggctcttc
ttggagaatctggttgctgcctttaatgttgcttcggataaaacaagaataggtcttgca
cagtacagtggagacccaagaatagaatggcagctggattcttactctaacaaggatgca
gtgatagatgctgtccggaaccttccttacaaaggcggcaacacactgacagggcttgcc
ttgacttacattctggaaaacagttttaagccagaatcaggagcaaggccggggcttccg
aagattggtattttggttaccgatgggaaatcccaagatgatgttattccacctgccaaa
agtctgaaagatgctggaattgaactgtttgcagtcggtgtaaaaaacgcggacttaaat
gaactcaaggaaatcgcctcggaacctgacagctctcatgtttacaatgttgctgatttc
aatgtcatggacacgattgtggatggactcacaaggaccgtgtgccagagagtgcaagaa
caagaaaatgatatcagaggaaccacggttacttcagtcactggatctccatcagaactg
gtcacgtcggagatcacagccagaggattccgtgttagttggactcatgcaccaggaaaa
gttgaaaagtacagagttgtgtactatccaagtaaaggagtgcagccagaagaggttgtt
gtcgatggcagtgtctctaccacagtgctgaaaaacttgatgtcccttacagaataccag
ttagcagtgtttgctgtttatattaacagtgccggtgaaggccttcgaggttctgaaacc
acattggcgcttccaatggcatcggatctgcagttatatgatgtcacccacagaagtatg
agagctaaatgggtcggagtcgctggcgctactggttacatgatcttatacgctcctctt
actgaagggttagcagcagatgagaaagagatgaaagttgatgggtcactcacagatgtt
aagttggacgacctgactcctaacacagaatacgcagtgactgtctatgccatgttcgga
gaagaagccagcgacccactcactgcgcaggagacaacgttgcctttaagcccacccagg
aacattcgatttacagccattgggcacagcagcgccacagtatcttgggatcactccaac
aagagagtcaatgggtatcggattatgtacgtgaaaaccggacgggcagaaaccaacgat
gtggtagttgatcgagtgtcaacctacaatctgaagcagctgtcgtccctcactgagtac
accgtcgccattttctccgtttttgacgaaggagaatctgagccgttaaccggcactttc
accacattaaaagtaccgaatccccagagcctggaagtcggtgacataaccacacacagt
ttcagagcgtactggaaacaatttgcttcagatatcgtgatgtacagactggtatggacg
ccactgagtggaggggaatctcaagagattgtcctgaatggcgacatcacctctcatctc
attgatggattaacacacagcacggagtacaaggtctcattaactgccatattcggggat
gagacagagagcgatgccttagctgccatggccactacattgagaaggaccacgactgtg
gctacaacagcaaaagtaaccaccgcagttgtccgattggggataagaaacctgttgata
gatgatgaaaccacgtccagcctgcaagtatcctggcaaataactgacggcaacatccgc
cattatatagtcacttacattaacccttctggtgccgaagaagagagaatggtgcccggg
aggctgaacgaggtggtgctgcagcctctgctctcagacacagagtataaagtcaccgtt
acgcctgtgtatttcaatggagagggaaacagtgtgtcggcatctggaaaaacattgcct
ttactcgctcccaggaacttgcgcgtctcagatgaatggtacaacaggcttaggattact
tgggactcccctccttctcccaccatgggctacagaatcgtctataaacctgtgaatgtg
ccaggaccagctttggagacatttgttggggatgatattaacaccatcctcattctgaat
cttctgagtggaacggaatacagcctgaaagtacttgcctcgtaccccactggtttcagc
gatgccttaaccggcctaggaaagacattgtacttgggagtgaaggacctgaatgcctat
cagataagaatgagaagcctgtgtgcccaatggcagctgcacagccacgcaatggcctac
agaatcatcatagagtcgctcatggatgggtcaaagcaggaggcttcgcttggtggagga
acttccaggcactgctttcatgagcttttccccaacaccaggtataggataactgtatat
gcacagctccaggaggctgaaggactgggtgtgagcattgtggagaccacattaccagta
ccaactgcagagcctacacttccaccaactactccaccccctccaaccattcctgttgcc
agagaagtgtgcaaggctgccaaggctgatctggttttcctggtggacggatcttggagt
atcggagatgacaatttcaacaaggtcattaaattcttgtacagcactactggagccctg
gatgagatcgggcctgaaggtacccaggttggaatagcccagttcagcgatgatgcaagg
acagaatttaaactgaattcctataagaacaaagataccctgctggatgccattcagcgc
atatcatacaaagggggaaacaccaaaacaggcagggccataaagcatgtccgagatgac
ctgttcacttctaattcgggaatgagaaagggagttcctaaagtgctggtggtgataaca
gatgggcgctcccaagatgatgtcaacagcattgccaaagaaattcaactggacggtttc
agtatttttgccatcggcgtggcggatgcagactatgcagagctggttaatataggcagc
aagcccagcgagaggcatgtgttctttgtggacgactttgacgcttttaagaagattgaa
gacgaactgatcacttttgtgtgtgaaacagcaactgccacttgcccgtgggtcttcatc
caaggaaacagcgtatcaggctttaaaatgatggaaatgtttgacctggtgcagaaagaa
tatgcggatatggaaggcgtctcgatggaaccagggaccttcaataatttcccttgctac
agactgcacaaggatgccttgctgtctcagccgactaaatatatccacccggaaggtctc
ccctcagactacacagtgtccttcctcttccgcatccttcctgacacccccaaagaacca
ttcgctctgtgggagatcctgaacaaagaatatgagcctctggtcggggttatagtggac
aatggtggcaaaacattgacgtactttaactacgattacaaggggcagttccaaaccatc
acgttcgaagggcccgaagtcaggaaaatattctacggcagtttccacaaggtccacatt
gtcatcaccaaaaccacttcccgactgattattgactgcaagcaagtggccgagaagcca
ataaacgcagcggggaacatcaccaccgacgggctggaagtcctgggaagaatggtcagg
tcaaggggaccaaaggacaactccgcaccattccagctacaaatgtttgatatcgtttgt
acaacctcctgggcagcccgtgacaaatgctgtgaattgccagcaatgagagatgaagcg
acctgcccatccctcccaaacacttgctcttgcgcacaagacagcaaaggagtccccgga
ccaccaggaccaccgggcggtgctgggatgagaggtccaaaaggagcacagggagaaagt
ggacgagccggacctgaggggccacgaggtcaaactggtgcaccaggtccacagggtccg
cccggaccacaaggtccaagtggactttcaattcaagggccgcctggtcaacagggtgca
aaaggggataaaggagatgtcggttttcaaggacaacagggtatcccaggaggctcaggt
tcccccgggcgtgacggagctacaggtccacggggattgccaggaaaggatggatcgaat
ggccccccaggacctcctgggcaaatgggatctccaagtaatccaggctctccaggagtc
ccaggaagcacagggtcccaaggtgaaaatggccccccggggcctcctggtgttaagggg
gaaagaggtgaaaggggggacactcaagcccacagtgtggtgcgctccattgcccgccaa
gtctgtgaacagatcattcagaatcacatgtccaggtttaattctctcttaaatcagata
ccaagccaatctgtatcagtcagggctgtaccagggccacggggagaacctggaagaaca
gggccagcaggtccttcaggagaacagggatctccaggaagaacaggattccccggaaat
ccgggacagccaggaacccctggagaaagaggtttaccgggtgaaaagggagaaagaggc
aaccccggtgtgggaacacaaggaccaagggggccacaggggcctgcaggaccaccaggt
gagggaagaactggtagccagggcccagccgggcaaccaggacaaagaggactgccaggt
ccacagggaattcctggttccacgggttctactggccaacccggatactgtgaccctgcc
tcttgtgctggatatggggttgaaggcttaatcccttacaatgactaccagccctga
DBGET
integrated database retrieval system
