Xenopus laevis (African clawed frog): 108695698
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Entry
108695698 CDS
T01010
Symbol
trub1.L
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xla03016
]
108695698 (trub1.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
108695698 (trub1.L)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108695698 (trub1.L)
Prokaryotic type
108695698 (trub1.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
108695698
NCBI-ProteinID:
XP_041426076
Xenbase:
XB-GENE-6486121
UniProt:
A0A8J1L990
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All DBs
Position
7L:3095896..3106714
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AA seq
327 aa
AA seq
DB search
MRLYCAAKLELCENSSVRPALLPVLGCHVVHQCRTERQYVQLQGKKQTLPEHMAGDMAVK
LLALNGLFPVYKPKGPTSAQVVAQLKGALLKEAGLKEYAKKRKQTLKIGHGGTLDSSASG
VLVIGIGNGTKMLSTMLAGSKKYTAVGELGKATDTLDASGTVTEEKPYDHITKDDLEGAL
KSFTGNIMQVPPLFSALKRDGKRLSNLLRDGAEVEAKPARPVTVYQLSLRDFQPPLFTLD
VECGGGFYVRSLVNDLGKELKTCASVKELVRTKQGPFTLEDHMLKEEDWNISRIAQALQE
YDPLLPVEPGNKRLRAEPADNTVASGE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgtactgcgcggcaaaactcgaactctgtgagaactcctctgtgaggccggca
ctacttccggtcctgggttgtcacgtggtgcatcaatgtaggacggaacggcagtacgtt
caattgcaggggaagaagcagacgttaccggagcacatggcgggggatatggctgtcaag
ctgttggcgctgaacgggctgttcccggtgtataaacccaagggccccacctcggcccaa
gtagtggcgcagctgaagggcgcgttgctgaaagaagccggactgaaagaatatgcgaag
aaaaggaaacagaccctaaagattggccatggggggacactggatagttctgcctcaggg
gtgcttgtaattggcattgggaatggcaccaaaatgttgagcacaatgctggcagggtcg
aagaaatacacggcagtgggagagctggggaaggctacagacacgctggatgcatcaggc
acagttactgaagagaaaccttatgatcacataactaaggacgacctggagggggcattg
aagtcattcacaggaaacatcatgcaggtcccccctctcttctcggcactgaagagggac
gggaaaagactgtcgaacctgctgcgagacggcgccgaggtggaagcaaagccagccagg
cctgtgactgtatatcagctgtctctcagagacttccagcctccactctttacgctcgat
gttgagtgcggaggtgggttttatgtgagaagcctggtcaatgatctcgggaaagaactg
aagacgtgtgcgagtgtgaaggagcttgtccgtaccaagcagggtccttttaccctagag
gatcacatgctgaaagaagaagactggaacatcagtaggatagcgcaggcactgcaagaa
tacgacccacttcttccagtcgagccaggcaacaagaggttaagggccgagcccgctgat
aatacagtcgcatccggggaatga
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integrated database retrieval system
