Xenopus laevis (African clawed frog): 108695759
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Entry
108695759 CDS
T01010
Name
(RefSeq) LOW QUALITY PROTEIN: RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
108695759
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
90S particles
Other 90S particles
108695759
Pre-60S particles
Other pre-60S particles
108695759
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Katanin_con80
Cnd1
HEAT_EF3_N
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
108695759
NCBI-ProteinID:
XP_018080219
UniProt:
A0A8J0T8W9
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All DBs
Position
7L:complement(28706066..28742124)
Genome browser
AA seq
1059 aa
AA seq
DB search
MGKAGKLRSGIAGKAKRWKKGHSSDSNPELRRHREAARSLFFSRPSCKSDLTVDALKLHN
DLQSDSLSVQKKSEKSEALMEDEDEMAITEKSGVSFLSGLSDCTNLTFGKVQRYWESNSA
AHKEICAVLAAVTEVIRSQGGTESETEYFAALMTTLEAVESPESLAAVTYLLNLVLKRVP
GPVLIKKFSDTSKALMDIMASQASSSNTSAMRWIVSCLAVLLRKQDLLTWTYPSTVQVYH
GLLSFTVHTKPKIRKAAQLGVCSILKGSEFMFSESAPKHHPAVHTTAKFCIQEIEKSGGS
KEATTTLHMLTLLKELLPCFPVGMGKSCCETLLKVMTLSNVLIELNLYPGLPLDSYDFPR
SWLIPVIRDHVKNTELGFFTKYFLPLAAKLKTRAAELSQEGRNLESKIYETLQWQIWTML
PGFCTKPTDVVDSFKGIARTLGMAISDRPDLKLTVCQALRSLINKGYEAGKPIXSDVNLS
LRHKLXCCVKLYLSLANPEMVSGFLDKACVKLTEAETSEPTRLYMLDLIIAMAPYADEPS
MTKVYDTILPYLEDKNHSLQKKAYRVLEEICGGEQPPCKELVNNNLEKLKNTLLTSLKSA
SSPAKRPRLKCLIHIVKQLAADHDEFITSLIPEVMICTREVSVGARKNAYTLLAEIGYAF
LRFNYDQKEAMEQYLAVVYAGLTGSVTMISCSVLTLTRLLFEFKDQMGLDVIEQLLENVC
LLLGSRTREVIKAALGFIKVIIFIMDIKVLSNQLQMMMEAIGNINSDMRRFFRVKLKNIF
TKFIRKFGFELVKSMLPEDYHKVLVNIRKTEARNKKQKALKQAAAEGEEDDRETRKLKGD
SIEDILADSDEEEEEEEKPNKQQKKQARQKSKAWLKEGEEDEPLNFLDPKAAQCVLATRP
NAKNTKLKHDFKTSSDGRLIIQDDEVKEKKNPTAAVDEEMADLMQEVGIRSKKAQKKRFR
EDDDDDDATDKKPQYKSGGSGIHRPFSRKPEIGANYKPKKGKGDVKQKGKHDPYAYIPLN
KANLNRRKKAKMQGQFKGMVRAAQRGAQSGLKKRKDRKL
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggcagggaaattgcgctccggtattgccgggaaagctaaacgttggaagaag
ggacacagtagcgactctaaccccgagctgcggcggcacagagaagctgctagaagccta
ttcttcagccggccttcatgtaaaagtgacctcacggtagatgctcttaagctccacaat
gacctccagtcagactccctgtctgtgcagaaaaaatcggagaaatccgaagcgcttatg
gaagatgaggatgaaatggcgataactgagaaatctggagtttctttcctgagcggcctg
tctgactgcactaatcttacatttggaaaagtgcagaggtactgggagtccaactcggct
gcacataaggagatctgtgctgtgctggctgctgttactgaagttattcgctctcaggga
gggactgagtcagagactgaatactttgctgctctgatgactactctagaagctgtagag
tcccctgagtcgttggctgcagttacatatctgcttaatctggttctcaagagggttcct
ggacctgttcttatcaagaagttttctgacacatccaaggcccttatggatattatggct
tcccaagcaagcagcagcaacacctccgctatgagatggattgtctcttgtctggcagtc
ctgcttcgcaagcaggatcttctcacatggacctacccctcaaccgtccaagtctaccat
ggactgctcagcttcactgtccatacaaaacctaaaatccgcaaggcggcccagctagga
gtgtgttccatcctaaagggcagtgagttcatgttcagtgaatcggcacctaaacaccac
ccagctgtacataccacggctaaattctgtatccaggaaatagagaagtctggaggtagt
aaagaagccactacaaccttgcatatgctgactttgctaaaggaactgctgccctgtttc
cctgtcggtatggggaaatcttgctgtgagaccctgctaaaggtcatgacgctaagcaat
gtgctcattgaattaaatctatatccaggacttccactggactcttatgacttccctcga
agctggctaatcccggtgatacgcgaccatgtgaagaacacggagctcggtttctttacc
aagtacttcctgcctctggctgccaaattaaagactcgcgctgctgaattatctcaagaa
ggacgaaatcttgaatcaaaaatttatgaaaccctccagtggcaaatctggacaatgtta
cccggattttgcaccaaacccacagatgttgtagattccttcaaaggaattgcacgcacc
ctgggaatggcaatcagtgatcgtccagacctcaaacttacggtctgccaagctctgcgc
tcacttatcaacaaggggtacgaagcaggtaaacccatctaaagtgatgttaatttaagt
ctgcggcacaaactgtagtgctgtgtaaaactgtacctttcgttagccaacccagagatg
gtcagcgggtttttggataaagcatgtgtcaaacttacagaagctgagacttccgagccc
acaaggttatatatgctggacctgatcattgccatggccccgtatgcagatgaaccctcc
atgactaaggtctacgacactatattgccatatctggaggacaaaaatcacagtttacag
aagaaagcctatagagtcttggaggaaatatgtggaggggaacagcctccatgcaaagaa
ttagtaaataacaatcttgaaaagctaaagaatacactcttgacttccctaaaaagtgcc
tcatccccagctaaaaggcctcgcttgaagtgtctgatccatattgtgaaacaactggct
gcggatcatgacgaatttataacatcccttattcccgaggtgatgatttgtaccagagaa
gtgtccgttggagcacgcaagaatgcatatacgttactggcagagattggatacgctttc
ctgcgcttcaactatgatcagaaagaggctatggagcagtacttggctgttgtctatgca
ggactgactggttccgtcaccatgatcagctgctccgtgctgacactcacacggctcttg
tttgaattcaaagatcagatgggcctggatgtgattgagcagttgttggagaacgtctgc
ctcctcttaggatccagaacacgggaagttattaaagctgcgctgggtttcatcaaagtc
ataatcttcattatggacataaaagttctgtccaaccagctgcaaatgatgatggaagct
ataggaaatatcaacagtgacatgaggcgcttcttccgagtgaagctgaaaaacatattc
accaagtttattcgaaagtttgggtttgagctggtaaaatctatgctgcctgaggattac
cataaagtcctagtaaacatccgcaagactgaagcaagaaataagaaacagaaagcatta
aaacaagctgcagcagagggagaggaggatgatcgagaaaccagaaaactgaagggagat
agcatagaagacattttggctgattctgatgaagaagaggaggaggaagagaaaccaaac
aaacagcaaaagaaacaggcccggcagaagagcaaagcttggctcaaagaaggagaagaa
gatgaacctctaaatttccttgatcctaaagctgcacagtgtgtactggctacaaggcca
aatgcaaagaacaccaagctcaagcacgacttcaagacttcgtcggacgggcgtctcata
atccaagatgatgaagtaaaagaaaaaaaaaatccgactgcagctgttgatgaagaaatg
gcagatctcatgcaggaagtgggaattcgaagtaaaaaagctcagaagaagagatttcga
gaagatgacgatgatgatgacgccacggacaaaaaaccacagtataaatctggaggctcg
ggaatacacagaccattctccagaaaaccagaaattggagcaaactacaaacctaagaaa
ggaaaaggcgatgtgaaacagaaaggcaagcacgatccatatgcatacatccctctaaac
aaagccaaccttaaccggaggaagaaagcaaagatgcaaggccaatttaaaggcatggtg
agagcagcacaaagaggagcacagagtggactgaaaaagagaaaagacagaaagctttaa
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integrated database retrieval system
