Xenopus laevis (African clawed frog): 108695862
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Entry
108695862 CDS
T01010
Symbol
chd5.L
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108695862 (chd5.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108695862 (chd5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
PHD-1st_NSD
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
108695862
NCBI-ProteinID:
XP_041425343
Xenbase:
XB-GENE-6487163
UniProt:
A0A8J1L733
LinkDB
All DBs
Position
7L:complement(103011905..103147595)
Genome browser
AA seq
1971 aa
AA seq
DB search
MRGPLGMEEDPIEDMENEEMSEEEAGGMEAIDFFSEELPPKRKKSKKSKEGKLSKTKRRK
KEGSDADVSENEDELEEKSESEGSVYAPNKKKKKKLKEKKEKKAKRKKKDDDDDNEDGGI
KEPKTSAQLMQEWGLENVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVL
GAKWREFSANNPLKGSSAAAAAAAVAAAVETVAVAPPLLVSPPQPVQPAPIRKAKTKEGK
GPGVRKKSKSSKDSKKKAKGKKVTNLKFKFGGMASKRRKGSSTLCEARNHCLMNPGIRGL
CISQSEEDEREESDFDSASINSSSVRSDISAGLGKRGKRVKKKKKVEEGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEDDEYEEDG
GEEEEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPP
LKGKVQRILHWVWREPSPPSIFPSDIDPLMPPPKPIEGIPEREFFVKWAGMSYWHCSWVK
ELQLELYHTVMFRNYQRKNDMDDPPPYDYGSGDEDGKSEKRKNKDPLYAKMEEKFYRYGI
KAEWMIIHRIMNHSFDKKGDIHYLIKWKDLPYDQCTWEIDNIDIPDYETMKQSYWDHREL
MLGEDARPLRFKKNRKMKDENLEKPPLVPIVDPTVKFDKQAWYIDSTGGTLHPYQLEGLN
WLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFE
MWAPEFYVVTYTGDKDSRAVIRENEFSFEDNAIKSGRKVFRMKKEAQIKFHVLLTSYELI
TIDHSILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHL
LNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVR
VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVL
PNGSYDGNSLVKSSGKLMLLQKMLKKLKDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYER
IDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ
AFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQEL
DDILKFGTEELFKDDVEADHHCGTLTVYKKTGDNKDVEDSSVIHYDDAAISKLLDRNQNA
TEDTEIQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQ
EDLARNLGKGKRIRKQVNYNDASQEDQEWHDDLSDNQSEYSVGSEDEDEDFEEKPEGGRR
QSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSNWLVR
DLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKV
QEFEQVNGKYSTPDLIPESVQNKKCFDMVSSDPNTPVAASPAPLPPGTTAMTEKCDAQSV
MQEDSEMVELKLKYPAEAQPTAKQEKSEQEEVNEELDMKDVEEDEEKEPADQNSKAETRE
EQEKQSDKSEPCVTPNKLEDKEPKTGEDKKPDEKEECETQQNGENDIKQEEDEGKKEDKN
GKFKFMFNIADGGFTELHTLWQNEERAAISSGKMYDIWHRRHDYWLLAGIVTHGYARWQD
IQNDPRYLILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDP
NHPAMALNARLTEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRL
PSMLSRIPPVAARLQMSERSILSRLTNRGGDPTLQGTFGSSQMYNNNFGPNFRGPGPGSI
VNYSQMPLGPYMTASNGTHSVYPDKKMIDSLKDCASLDRKGRLSDIIFIED
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgcggggtccactggggatggaagaggaccccatagaagacatggagaatgaagagatg
tcagaagaggaagctggaggtatggaagcaatagactttttttctgaagaactcccacct
aagagaaagaaatctaaaaaatccaaggaaggcaaactatcaaaaactaaaagaagaaaa
aaagagggaagtgatgcagacgtgtcagaaaatgaagatgagcttgaggaaaagtcagaa
agtgaaggaagtgtttatgctcccaacaaaaagaagaagaaaaagcttaaagaaaagaaa
gaaaaaaaagctaaacgtaaaaagaaagatgacgatgatgataatgaagatggtggtatt
aaggagcctaaaacttcagctcaattaatgcaagagtggggcctagaaaatgtggactat
gtcttctcagaggaagattatcatacactgaccaattacaaggctttcagtcagtttctc
aggcctttaattgcaaagaagaatccgaaaatcccaatgtcgaagatgatgactgtgctt
ggggccaaatggcgggagttcagtgctaataatccactaaaggggagttctgccgcagca
gcagctgctgccgttgcagcagcagttgaaactgtggctgttgctcctccactattggtc
agtcccccccaaccagtccaacccgcacctattaggaaggcaaaaaccaaggaaggaaaa
ggacctggtgtaagaaaaaaatctaaatcgtccaaggatagcaagaaaaaagctaaaggc
aagaaagttacaaacctgaaatttaaatttggagggatggccagtaaaaggagaaaaggt
tcatcaaccctgtgtgaggctcgtaatcactgcttgatgaatccaggcatcaggggtcta
tgtattagtcagagtgaggaggatgaaagagaagagtctgactttgacagcgccagcatc
aacagctcatctgtgcggtcggatatcagtgctggattaggaaagagaggcaaaagagta
aagaaaaagaagaaagttgaagaaggtgacggttatgaaacagatcatcaggattactgc
gaagtttgccagcagggaggggaaatcatattatgtgacacatgcccccgtgcctatcac
cttgtctgcctggatcctgaactggaaaaagccccagagggcaagtggagttgtccacac
tgtgaaaaagaaggcatccaatgggaaccaaaggaagatgatgagtatgaagaagatggg
ggagaagaagaagaagaagaggaagatgaccacatggagttttgtcgtgtttgtaaagat
gggggtgaacttctgtgctgtgacacttgtccctcttcttatcatttgcactgtcttaac
ccacctttgcctgaaataccaaatggtgaatggctgtgccctcgttgtacgtgtccacct
ttgaaaggcaaagttcaacgaatcctacactgggtatggcgagaaccttcccctccatca
atctttccttccgatatagatccccttatgccacctccaaagcctatagagggcattcca
gaaagagaattcttcgtcaaatgggcagggatgtcctactggcactgctcctgggttaag
gaattacagctagaactgtatcatacagtcatgtttcgaaattaccaaagaaagaatgac
atggatgaccctcctccatatgactatgggtctggggatgaagatggcaaaagtgaaaaa
cgaaaaaacaaagatccactgtatgcaaagatggaagaaaagttttacagatatggcata
aaagcagaatggatgataatacaccgaataatgaatcacagttttgataagaagggagat
atccattatctgatcaagtggaaggacctgccttatgatcagtgtacatgggaaattgac
aatatagacattccagattatgagaccatgaaacaatcttactgggaccacagggagtta
atgctcggtgaagatgcaagacctcttagatttaagaagaacagaaagatgaaagacgag
aatctggaaaaacctcctttagtcccaatagttgatccaactgtaaagtttgataaacag
gcttggtacatagattccacgggaggaacattacacccttaccagttagaaggattaaac
tggttaaggttttcctgggcacaaggaaccgatactattcttgcagatgaaatgggtctt
ggaaagactgtccaaactatcgttttcctctactccctgtacaaagagggtcattccaaa
ggtccatatttggtcagtgcaccattgtctactatcatcaactgggaacgggaatttgag
atgtgggcgccagagttttatgttgtaacatacactggtgataaagacagtcgagcagtc
attagagaaaatgaattttcttttgaagacaatgccatcaaaagtgggaggaaggtgttt
cgcatgaaaaaagaagcccagataaaattccatgtgctgcttacatcttatgagctaatc
acgattgatcattccatcttgggttctattgagtgggcatgccttgtagtggatgaggca
caccggctgaaaaacaaccagtcgaaattctttagggtattaaatagctacaagattgac
tataaactgctgctaactggaactccacttcagaataatttagaagaactttttcatctt
ctcaatttcctgacacctgaacgattcaataatctagaagggtttttggaagagtttgca
gatatctccaaggaagaccaaattaagaaacttcatgacttgctgggaccccacatgctg
aggcggctgaaagcagatgtctttaagaacatgccagccaaaacagaattaatagtacga
gtggagcttagccaaatgcaaaagaagtattataagttcatattgacaagaaactttgag
gctttgaattcgaaaggaggtggaaaccaagtttcattgctcaacatcatgatggaccta
aagaagtgttgtaatcacccttatctctttcctgtcgctgctgtggaagccccagttttg
ccaaatggatcatatgatggaaattctttggttaaatcttctggaaagctgatgcttcta
caaaaaatgctgaagaaactaaaggacggagggcaccgggtgctgattttttctcagatg
acaaaaatgctggacttacttgaagattttttagaatatgagggctataaatatgaacga
atagatggtggaatcacaggagggctacggcaggaggcgattgacaggtttaatgctcct
ggtgctcagcagttctgctttctcttgtccactcgagctggaggtctgggtataaattta
gctactgctgacactgtaataatttatgactcagactggaaccctcacaatgacatacag
gcgtttagcagagctcacaggattgggcagaataaaaaagtgatgatctaccggtttgtc
actagagcctccgtagaagagagaatcacacaggtggcaaagaggaaaatgatgttgacc
cacttggtcgtacggccaggacttgggtctaaatctgggtctatgactaagcaagaactg
gatgatattttaaaatttggcaccgaggaactgtttaaagatgatgttgaagctgaccat
cattgtggtaccttaaccgtgtacaagaaaactggtgataacaaggatgtggaagacagc
agtgttatccactacgatgatgcagccatttcaaaacttttggaccgaaaccaaaatgca
accgaggacacagaaatccaaaacatgaacgaatatctcagttcttttaaagtggcccag
tatgttgtgcgggaagaagatggtgtggaggaagtggaacgagagataattaagcaggaa
gagaatgttgatccagattattgggaaaagctgcttcgacatcattatgagcaacagcag
gaagatcttgccaggaatctcggcaaagggaagcgcatccgcaaacaggtcaactacaat
gatgcctcacaagaggaccaagaatggcacgatgacctgtctgacaaccagtcagaatat
tcagttggttcagaagatgaagatgaggattttgaagagaagcctgaaggtggcagaagg
cagtctcgacggcaattaaagagtgaccgagataaaccacttcccccacttctggcaaga
gttggaggaaatatcgaggtccttggatttaatgcccgacagcgcaaagcatttttaaat
gcaatcatgagatggggaatgccaccccaagatgcttttaattcaaactggctcgttcga
gatctcagaggaaagagtgagaaagaatttagggcgtatgtgtccttattcatgagacat
ctgtgtgaacctggagcggatggagcagaaacctttgccgacggggttccaagagaagga
ctgtcacgtcagcacgtactcactagaattggagtcatgtcactggttcgaaagaaggtg
caagaatttgagcaggtcaatggaaagtacagtaccccggatctaatcccagagagtgta
caaaataaaaaatgtttcgacatggtttcgtctgatcctaacacacctgtagcagccagt
ccggctccactgcctcctggaacaacagccatgacagaaaagtgtgatgcacagtctgta
atgcaagaggactctgaaatggtggagctcaagctgaaatatcctgcagaggcacagcct
actgccaagcaagagaaatctgaacaagaagaagtaaatgaggaattggatatgaaagat
gtagaagaggatgaggaaaaagaaccagcagatcagaattctaaagctgagacccgtgag
gagcaagaaaaacagtcagacaagtcagaaccatgtgtaacgccaaataaactagaggac
aaggagcccaagacaggtgaggataaaaaaccagatgaaaaggaagaatgtgagacccag
cagaatggtgaaaatgatatcaaacaggaagaggatgaaggaaaaaaagaagataaaaat
ggcaaatttaaatttatgtttaatatcgcagatggtggctttacagaacttcacacactg
tggcaaaatgaagaaagagccgcaatctcctcaggcaaaatgtatgatatttggcataga
aggcatgattactggcttctggcggggattgtcacacacggttatgcccgctggcaggat
attcagaatgaccctcgctatttgattttaaatgagccgtttaaatcggagattcacaaa
ggaaattatctggaaatgaaaaacaagtttcttgctcggagattcaagttactagaacaa
gcgctggtgatcgaagagcagctacgaagggcagcctatctcaacatgactcaagaccca
aatcacccggccatggctctcaatgcgcgactaactgaagtggaatgtctagctgagagc
catcaacatctctccaaagaatctcttgcaggaaataagccggctaatgctgttcttcat
aaagttctgaaccagctggaagaattgctgagcgatatgaaggcagatgtgacccgttta
ccctcaatgctgtctagaatcccgcctgttgcagcccgcctacagatgtctgagcgtagt
attcttagcagactcaccaaccgaggaggggacccgactctccagggaacattcggatcc
tctcaaatgtataataacaactttggccccaatttccgaggacctggtcctggcagcatt
gtcaactacagccagatgcctcttggaccatacatgactgcatccaatgggactcactca
gtgtatcctgacaaaaaaatgatcgattccctaaaggattgtgcgtcattggatcggaaa
gggagactcagtgacatcatctttattgaagattaa
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