Xenopus laevis (African clawed frog): 108696042
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Entry
108696042 CDS
T01010
Symbol
clstn3.L
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108696042 (clstn3.L)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Cadherin related
108696042 (clstn3.L)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
108696042
NCBI-ProteinID:
XP_018080515
Xenbase:
XB-GENE-17343668
UniProt:
A0A1L8FIF0
A0A974CDY3
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All DBs
Position
7L:6324066..6349999
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AA seq
928 aa
AA seq
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MLQRDLPLSVLLISALLYCAASNKGNKHKPWIEAQYQGIIMENDHTVLLNPPLFALDKDA
PLRYAGEICGFRIHGSGTPFEAVVLDRTTGEGLIRAKGPVDCEAQREHTFTIQAHDCGEG
PDGVNSKKSHKATVHVRVNDVNEFAPVFGERVFRASVTEGRMYEKVLRVQAWDQDCSPQY
SQVCFYQILTPNVPFTIDNDGYIKNTQPLQASGEKLIRFTVTAYDCGKKRAVEDAEVEIQ
VKPTCKPSWKGWNKRIEYVPGSGSLALFPNIHLETCDEPVGNIQATVEIQTSHIAKGCDR
DNYSEKALRKLCGAAPGDVDLLPSPSLVHNWTHSLPVQDTQDSSLVFWFNGSQSVEVAPG
HLPAGGRTADHLTLSFWLKHAGGSGGRAGKEEEVLLCNTVQNGDGSFSHYTLAVHGCRIS
FLYWSLLESARPVKFLWKLEQVCDVEWHHYALSLEFPTVSLYVDGVTYDPALIHDNGALP
PPRRQARLMIGGCWAAEEKLSVKVDDNETTRVIGTVPGRFLRGYMSGLTLRLGPVDSREV
IECLYSCKEGLQFTDFDSLGKGMKVHVNPAQSQLSLEGDDAHSFSRALQHVEYLNSLQFP
TPGVRPLKLQTIVKCPSDEGCLTVPDLEGYLVVLQPDAPQVQLSGSPRSAHPISDFQGPL
GVPIFPDLKITCSVSHPISSNKQERAPRADMQSPDGIECSLEKCEVGVVGEDLNMEYESL
SVDVSSTWQRGLEMENSSRSLKITGVQSVAVYEDILRSLTYRTVVRATLYARKFHVSCSE
MNGRYISNQLYTEVDVLHGIHAGSPNHVLSAQQFVHNAQQAPAELSGHTLATTNPGSVFP
GVAMVIIIACIGFLALIVTLGLSRIHSVQQRDGVEEPELEAATQRDTFWEDSAMTITVNP
MESLQSRGLVSAQKEPVSEQREPNEESG
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcgagacctccctctgtctgtgcttctcatcagcgctctgctgtactgcgct
gcttctaacaaaggcaacaagcacaagccatggatagaagctcagtaccaagggataatc
atggagaatgatcacactgtactgctcaaccctcccctgtttgctctggacaaggatgct
ccactgagatatgcaggtgagatttgtggcttccggatccatggctctggaacccccttt
gaagctgtggttctggatcggacaacaggagaagggctgataagagccaagggccctgta
gactgtgaggcccagagggagcacaccttcaccatccaagcgcacgactgtggagagggg
cctgatggagtgaacagcaaaaaatctcacaaggccacagttcacgtgcgggtgaatgat
gtcaatgaatttgcccccgtgtttggagaacgggttttcagagcctcagtcaccgagggg
cggatgtacgaaaaagttctacgggtgcaagcttgggaccaggactgttccccccagtac
agccaagtctgcttctaccagatactcactcccaatgtgcccttcaccattgacaatgat
ggctacataaagaacacccagcctttgcaggcgagcggggagaaattgatccgatttacg
gtcacggcgtacgactgtgggaagaagagagctgttgaggatgcagaagttgaaatccaa
gtcaaaccaacctgcaaacccagctggaaaggctggaacaaacgcattgagtatgtgcct
ggttccggcagcttggccttatttcccaacattcatttggagacctgtgacgagccagtg
gggaacattcaggccaccgtagagatccagacaagccacattgccaagggctgtgaccgt
gacaattattcggagaaggccctgcgcaagctttgtggagcagccccaggggacgtggac
cttttgccatcccccagcctcgttcataattggactcacagcctccctgttcaggacaca
caagacagcagccttgtcttttggtttaatggatcccaatctgtggaagtcgcccctggt
cacctaccagcagggggcagaaccgcagaccacctcacgctctcgttctggctgaaacat
gccggtgggagcggaggacgggcagggaaggaagaagaggtgcttctatgtaacacggtg
cagaacggagacgggagcttctctcattatactctggctgtacatggctgccggatctcc
tttctctattggtctctactggaaagtgcccgtcctgttaagttcctttggaaactggag
caggtgtgtgatgtagaatggcaccattacgctctcagtctggagttcccgacagtctct
ctgtatgtggatggagtcacctacgaccctgcgctcatccatgacaacggagctcttccc
cctcccaggcgccaggctcggctcatgatcggggggtgctgggcagcagaagagaaatta
tccgttaaagtggatgacaacgagacaacgagagtaataggcacagttccaggacgtttc
ctgcggggctacatgtcgggccttaccctgagactggggcctgtggattcccgggaggtg
atcgagtgcctgtattcctgtaaggagggattgcagtttacagattttgacagcctgggg
aaaggaatgaaggttcacgtcaacccagcccagtcccagctgtccctggagggggacgat
gctcattcatttagccgtgccctacagcatgtggagtacctcaactctttacagtttccc
accccaggagtgagacctctcaaactgcagactatagtcaaatgtcccagtgatgaagga
tgtctcacagtgccagatctggagggataccttgtagttctgcagccagatgctcctcag
gttcaactttctgggtcacctcgctctgcacaccccatctctgactttcaggggccattg
ggggtccccatattcccagacctgaagattacctgctcagtttctcatcctatcagctca
aacaagcaagagagagctccaagggctgatatgcagagtcctgacgggattgagtgctcg
ttagaaaagtgtgaggttggcgttgtaggagaggacctgaacatggagtatgaaagtctg
tctgtggatgtctcttctacatggcagcgtggccttgagatggagaacagttctaggagc
ctaaagatcacaggggtgcagagtgtggccgtgtatgaggacatcctgcgaagcttaact
taccgaacagtggtcagagcaactttatatgcccgcaaattccacgtgtcctgcagtgaa
atgaatgggaggtatatcagcaaccagctatatacagaggttgatgtgttacatggaatc
cacgctgggtcccccaatcacgtcctctccgctcagcaatttgtccataatgcacaacaa
gcccctgccgagttatcaggtcacacgctggccactaccaaccccggctctgtcttcccg
ggagttgccatggtgataatcattgcctgcattggcttcctggcactgatagtcactctg
ggcttgtcacggatacacagtgtacagcagagagatggagtagaggagccagagctggag
gcagcgactcagagagataccttctgggaagactcagccatgacaattactgttaaccca
atggagtccctgcagtctcgtggcttggtatcagcacagaaagagcctgtatcagaacaa
agggaaccaaacgaggaatcgggttaa
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