Xenopus laevis (African clawed frog): 108696043
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Entry
108696043 CDS
T01010
Symbol
emg1.L
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108696043 (emg1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
108696043 (emg1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
108696043 (emg1.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
90S particles
Other 90S particles
108696043 (emg1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
TetR_C_43
Motif
Other DBs
NCBI-GeneID:
108696043
NCBI-ProteinID:
XP_018080517
Xenbase:
XB-GENE-6485598
UniProt:
A0A974CDR2
A0A1L8FIF7
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Position
7L:complement(6350900..6356819)
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AA seq
234 aa
AA seq
DB search
MAASRESTLGKSTAGDEEQWGGPKAKRRREKRLIVLLEGACLETVRVGKTYELLNCDQHK
SLLIKNGRDPGQVRPDITHQSLLMLLDSPLNRAGLLQVYIHTHRNVLIEVNPQTRIPRTF
PRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPLTDHLPVGCVKMALSFSGESAPCVRDLV
PACEPVLFVVGAFAHGSVNVDYTERCVSISQYPLSAALTCAKLCTAFEEVWGVQ
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccagggagtccacgcttggcaagtccacggctggggacgaggagcagtgg
ggagggccgaaagcaaagcggcgacgagagaagagactgatcgtcctgctggagggagcc
tgtctggagactgtgcgggtggggaagacgtatgaacttctcaactgcgatcaacacaaa
tctctgctgataaagaatgggagagacccgggacaggttcgaccggacattacacaccag
agtttactgatgctccttgacagtcctctgaatcgggccgggctgctgcaggtttatatt
cacactcacaggaatgttctgatcgaggttaatccccagacacgaataccccgaaccttc
cccagattctgtggcctgatggttcagttactgcacaagttgagcgtcagagctgctgat
ggtccccaaaaacttctcaaggtcattaagaatcccttgacggatcacctccctgtaggc
tgtgttaagatggctttgtccttctcgggagagagcgccccctgtgtgagagacctggta
cctgcctgtgaacctgtgctgtttgtggtgggagcttttgcacatggatcggtcaatgtg
gattacaccgagcgttgcgtttccatcagtcagtacccactctctgctgccctcacctgt
gccaagctgtgtactgcatttgaggaggtttggggggtccagtga
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integrated database retrieval system
