Xenopus laevis (African clawed frog): 108696079
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Entry
108696079 CDS
T01010
Symbol
sbno2.L
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108696079 (sbno2.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108696079 (sbno2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108696079
NCBI-ProteinID:
XP_018080587
Xenbase:
XB-GENE-17338209
UniProt:
A0A1L8HWL0
A0A974I416
LinkDB
All DBs
Position
1L:109142372..109202254
Genome browser
AA seq
1334 aa
AA seq
DB search
MICTLSVMDRGGGYTYPEPQHGANGMSPAAAMLYQPSQPESETASPAGNLWTHYPYSPAH
CLPHASLTSPSQPFFNNPAQSSLFQDSVSQSYSTSFSASSYFDFQEPSLTNDFSDHSLLP
SSPDSLSDIRDAQEFLTVEGLDRVPTLWDIHTPSQDLSNSHHFHPNPTLPSLGTFEDLAA
IINTASTQERLPQEEEEEDEDTEELGHTETYADYMPSKSKIGRQHPDRVVETSTLSSVPP
PDISYSLTLPSCIIEQGLLSALQLEAIVYACQQHEVILPSGQRAGFLIGDGAGVGKGRTV
SGIILENFLKGRKKALWFSVSNDLRCDAERDLRDINAGCITVHALNKIKYGDTSSSEGVL
FATYSALIGESQAGGQHRTRIKQIRDWCGENFDGVIVFDECHKAKNASSTKMGRAVLELQ
NNLPMARVVYASATGASEPKNMIYMSRLGIWGEGTSFSIFDDFLHAIEKRGVGAMEIVAM
DMKVSGMYIARQLSFSGVTFRIEEIPLEESYKQMYNRAAQLWAEALIVFQTAADWLGLES
RKSLWGQFWSSHQRFFKYLCIASKVQRLVTLVHQELAKGKCVVIGLQSTGEARTREVMDE
NDGHLDCFVSAAEGVFRSLILKHFPSTKRKREKGIQKRKRRGKPRSGKVPRGDLGLIRIS
EESSSDSEVGLDSDFNSSPESFQDDDVIYIERTMNGMTLPDRVPEVDRLKMELLAKVETL
GKELPLNTLDELIDQFGGPEKVAEMTGRKGRVVRKDNGSVSFESRAEQNLSIDNVNLREK
ERFMNGEKLVAIISEASSSGISLQADRRVHNQRRRVHMTLELPWSADRAIQQFGRTHRSN
QVSAPEYVFLISELAGEKRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTRA
LEQILSAILNRTQKAVPPPRDYPGGATAFFHEIRQGLLSVGICCRETKHNAIDKECSVTK
FLNRMLGLEVHKQNSLFQFFSDTFDYLIEKDKKEGKYDMGILDLAPGVDEIYQESKDTFM
TPGHPQDGQVVFYKISVDRGMSWAKALEKSHQLEDQLEGFYLSYRVRGKMFSAVLAEHRH
GNYFNLYKPNIGRQSQAEALDSFLNRYHKVTAEEAMPHWECQYNFFLNHCSHTMWNGNCK
VQQQKKECVQGLRLRHYYMLCGSLLRVWSRMASVISDITSSSYLQIVRLKTKDKHKQVGI
KIPESCVFKVREELKQMDLNVKKKHEEALQKAENLSYTPLDLSFFRPPPLVDPNVLDLTN
SPPHPSIQEHRGGTSYSDSLGDILSPVESLPNQHFNVKEIIEEMIQKLKDPDSSSDRQSV
IHFGGEHNSYWGTG
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcacactatctgtgatggaccgggggggtggatacacatatcctgagccacag
cacggagccaacggaatgagcccagcagctgctatgctttaccaaccaagccagcctgag
tctgagaccgcttcaccagctggcaacctgtggacacattacccatattcacctgctcat
tgcttgccccatgcttctctcaccagcccaagtcaaccattttttaataacccagcacaa
tcaagcctttttcaagactccgtctctcaaagctactctacttccttctcggcatccagc
tatttcgactttcaggaaccatccctgaccaatgacttctccgaccactccctccttcca
tcttctccagattctttatctgatattagagatgctcaagaattcttgacagtagaaggt
ctggatagggtacctactttatgggatatccacacaccatctcaagatctcagcaattcc
catcacttccatcccaaccctacccttccatctttgggaacctttgaagacttggcagcg
ataatcaatactgcctctacacaagaacggcttccccaagaagaggaagaggaagatgag
gacactgaagaattagggcacacagaaacatatgcggactatatgccatctaaatctaaa
attggtaggcagcatcctgaccgagtggtagagaccagcaccctatctagtgttcctcct
ccagatatctcctactctttgactctgccaagctgtattattgaacaaggccttctctct
gcattgcagctggaagctatagtgtatgcctgccagcaacatgaagttatcctaccaagt
ggccaacgggctggcttccttattggagatggagctggagtggggaagggaaggacagtc
tctggaattatcctggaaaactttttaaagggaagaaagaaagcactctggttcagtgta
tctaatgatctgcgctgtgatgcagagcgagatttaagggacatcaatgctggttgtata
acagtgcatgcactcaacaagattaagtatggagacacatcttcatcagaaggggttctc
tttgccacctattcagccctgattggggagagccaggcaggaggacagcaccgcacacgt
attaaacaaatcagagactggtgtggagagaactttgatggagtgattgtgttcgatgaa
tgtcataaagccaaaaatgcttctagcaccaaaatgggacgggcggtgctggagctacag
aacaacctacccatggcaagagtggtgtatgccagtgccacgggtgcttctgagcccaag
aacatgatctacatgagccgtttgggaatttggggggagggcacatccttcagtattttt
gatgacttcttgcatgcaattgaaaagaggggtgtaggtgctatggaaattgttgccatg
gatatgaaagtaagtggcatgtatattgcaaggcaacttagcttttctggagtcactttc
cgaattgaagaaattccattggaggagtcatataaacagatgtacaacagagcagcacag
ctgtgggcagaagcattaatcgttttccagactgcagcagattggttaggtttagagtca
cggaaatcactctggggccaattctggtcatctcatcagcgttttttcaagtatttgtgc
atcgcatctaaagtgcaacgtcttgtgactctagtccatcaagaacttgcaaagggcaag
tgtgtggtcattggtttgcagtcaacaggagaagctcgtacacgggaagtcatggatgaa
aatgacggtcatctcgattgctttgtttcagctgcagagggtgtcttcaggtctttaata
cttaaacatttcccatccaccaagagaaaacgtgaaaaaggcatacaaaagagaaaacgg
agaggaaagcctcgcagtggaaaggtgcctcgtggagatctgggtttaatacgtatcagt
gaggaaagcagctctgattctgaagtggggttggatagtgatttcaattcttccccggag
tcatttcaagatgatgatgtcatttatatagaacgcacaatgaatggaatgactcttcct
gaccgtgttcctgaagtggatcgtctaaagatggagctgctagcaaaagtcgagacatta
ggaaaggaattacctctcaatactctggatgaacttatagatcagtttgggggtccagaa
aaggtggctgagatgactgggagaaaggggcgcgtggttcgtaaagataatggatctgtg
tcgtttgaatctcgagctgagcagaatctatccatagataatgtaaatctaagagaaaag
gaacgcttcatgaatggagaaaagttagtagcaataatctcagaggcatcaagttcaggg
atttcccttcaagcagacagacgagtccataaccagcgtagacgtgtccacatgacactt
gagcttccatggagtgctgacagagccattcagcagtttggccgtactcatcgttccaac
caggtgtctgctccagagtatgtcttcctaatctcagaacttgcaggagaaaaacgattt
gcttctattgttgccaagaggctggagagtctgggagctttgactcatggggaccggcga
gccacagaatccagagatctgagcaagtacaactttgagaataagtatgggacacgggct
cttgagcagattttgtctgctatcctaaaccgaacacagaaagcagtgcctcctccaagg
gattatccaggaggtgctacagcatttttccacgaaataaggcaagggcttctctctgtg
gggatttgttgcagggaaacaaagcataatgccattgataaggaatgttcagtcaccaag
ttcctcaatcggatgcttggacttgaagttcataagcagaacagcctcttccagtttttt
tctgatacatttgattaccttattgaaaaggacaaaaaggaaggaaaatatgacatgggc
attttggatttggctcctggagtggatgagatttaccaagagagtaaagacactttcatg
acacctgggcaccctcaggacggacaagtggtattttacaagatcagtgttgatcgaggg
atgagctgggcaaaagcactggaaaaatcccatcaacttgaagaccagctggaaggcttc
tacttgtcttacagggttcgtgggaaaatgttttcagcagttttggcagaacatcgacat
ggaaactactttaacctgtacaaaccgaacattgggagacagagccaggctgaagctttg
gatagttttctcaacagatatcacaaggttactgccgaggaggctatgccacattgggaa
tgccagtacaacttctttttaaaccactgcagtcataccatgtggaatggtaattgtaaa
gtgcaacaacaaaaaaaagagtgtgtgcaagggcttcgcctgcgacattattatatgcta
tgtggctctctccttcgtgtttggagtcgcatggcctcagtgatctctgatattaccagc
agcagctacctacagatagtacgactgaaaaccaaagacaaacacaaacaagttggtatt
aagattccagaaagctgtgtgttcaaagtgcgcgaggaactaaagcaaatggatttgaat
gttaaaaaaaaacatgaagaggcccttcagaaagcagaaaatctcagctataccccattg
gacctctctttcttcagaccgccacccttggtagatccaaatgttctggatctaacaaac
agtccaccacatcctagtatacaggaacatcggggtggaacttcttactctgacagtctg
ggagatattctttctcccgttgaaagtctccccaaccagcacttcaatgtaaaagaaatc
atagaagaaatgattcagaaactgaaagatccagattcttcttcggatcgtcagagtgta
attcattttggaggagaacataatagttactggggaacaggctga
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