Xenopus laevis (African clawed frog): 108696345
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Entry
108696345 CDS
T01010
Symbol
ercc6.L
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108696345 (ercc6.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108696345 (ercc6.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
108696345 (ercc6.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108696345 (ercc6.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
108696345 (ercc6.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ING
RHH_8
Motif
Other DBs
NCBI-GeneID:
108696345
NCBI-ProteinID:
XP_018081108
Xenbase:
XB-GENE-6486094
UniProt:
A0A1L8FKT9
A0A974CF89
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All DBs
Position
7L:complement(65456859..65493286)
Genome browser
AA seq
1370 aa
AA seq
DB search
MPGEVPSFTNQDEGLVGSVSENDADAPGPSSSYVQHSLPPGDIGLRKANPLLQIDRQQIQ
AVQSEQQALELQGLGLAVYDQEVLEQGVLQQVDNAINEASRASRLAETEQELQQLVDELR
SCVTSLRQINKIVEQLTPQAANSKEIGRKLDSVKRQKHNKEQQLKKIKAKQKRLKAVLGG
NQEEPDIEEELQAYQEEDALPSSLGSMLMPSQDQEWEDLIRTGQMTPFGTKIPPKEERRP
RKLMLNESSDFEKYLADQAQMAVQRKRSQTPKKEKKKPLLVKGPSSLPSVKKTDTSSTGK
KLQKKMRKLQSKALQTQFRVGVPTKPNPVPKNETEKGDESEGSVYTPEEKEESMEEDKEE
WVHDSPGSEYELKPLIQKTNGKRPRNKGIDPEFLPSSDEDEDHPPNSGKKQRCRDDGNAQ
FYKQRLRCWHKQHEKEKEEHTAAEESEDSDVEFDEGFCVPGSLWKKLYKYQQTGVRWLWE
LHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSRIRTRGSDYRYEGLGPSIIVCPATVMHQ
WVKEFHTWWPQFRVVVLHETGSYAGKKVKLIGELGNGRGIIITSYSYVRLMQEELQKYHW
HYIILDEGHKIRNPNAGVTVACKQFRTPHRIILSGSPMQNNLQELWSLFDFVFPGKLGTL
PVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMILALPEKN
EQVLFCRLTDEQRQVYQTFIDSKEVYGILNGDMQVFPGLIALRKICNHPDLFSGGPKILK
GTRDEDLEEEEQFGFWKRSGKMIVVEALLKIWHRQGHRVLLFTQSRQMIQIMEVFVRTRG
YSYVKMDGTTTIAARQPLITKYNEDPSLFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPS
TDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSN
DLYELFTLTSPDTSQGTETSAIFAGTGSDVQVVKRTANHLVTHSQAASHKELSDSITIPP
SLPKEPLNPCNNVLHQSKENPMLDGSEGKSTSSTSIKVDSGEHCKQVALTEVPENGHRKH
KAKTKHQNKEGKRVKRKKDAKYEGKRISHLVKQKAFLKEEDDQHEDRRKSDDYVLEKLFK
KSGVHSAMKHDVIMDAVNPDFVLVEEEASRVAHEALRALKVSRQRCYAASSGVPTWTGTN
KAPPTGTKRRFGQKKNPLLHPADAPGKLSQDKCKDSNIAKQEDQSSSGAPSHFSGDNQSA
GSALSSSSLLARMKARNNLLLPHRDENETSSGVSSVDPTEHDELLADMRNFIAFQARTDG
EASTQELLQEFENKLSPKQSCVFRELLRKLCTFHRGIDGTGVWRLKPEFH
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgcctggggaagtccccagtttcacaaatcaggatgaaggtttggtgggatcagtttca
gagaatgatgctgatgctcctggtccatcatccagctatgtccagcactctcttcctcct
ggtgacattggactcaggaaagcaaaccctcttcttcagattgatcgtcaacagattcaa
gcagtgcagtctgagcagcaggctttggaactgcaaggattgggattggcagtctatgac
caggaagtgcttgaacaaggtgtcctacaacaggtggataatgcgatcaatgaggctagt
cgggcttcacgtcttgcagagactgagcaagaactccaacaacttgttgatgaacttcgc
tcttgtgttacctcccttcggcaaattaacaagatcgttgaacagcttacaccacaagca
gctaacagcaaggagattggacggaaactggactctgttaaacggcaaaaacataataag
gaacaacagctgaagaaaatcaaagcaaaacagaaacgtctaaaagcagttcttggtggg
aaccaggaagaacctgacatcgaagaagagttacaggcatatcaggaagaggatgccctg
cctagctctcttggaagcatgttgatgccatcccaagaccaagaatgggaagatttaatc
cgtactggtcagatgaccccttttggcactaaaatccccccaaaggaagaacgtcgtcca
aggaaacttatgcttaatgagtcttcagattttgaaaagtatcttgctgatcaggcacag
atggctgttcagagaaaacgttcacagaccccaaaaaaagagaaaaaaaaacctttactt
gttaagggtccatcatcgttgccttcagtgaagaagactgatacctcatctacaggaaaa
aaattgcagaagaagatgagaaagctgcagagtaaagcactccagacacaatttagagtt
ggtgttcctacaaaacccaaccctgtgcctaaaaatgaaactgaaaaaggggatgaaagt
gagggctctgtttatacaccagaggaaaaagaagagagcatggaggaagataaggaagag
tgggtgcatgacagcccaggatctgaatatgaactaaagcctttgattcagaaaacaaat
ggaaaaagacctaggaacaagggcattgacccagaatttttgcctagttctgatgaggat
gaagatcatccccctaattcagggaaaaagcaaagatgcagagatgatgggaatgcccaa
ttttacaaacaaagacttaggtgttggcataaacaacatgaaaaggagaaggaagaacac
actgcagctgaggagtccgaggacagtgatgtggagtttgatgaaggtttctgcgtacct
ggctcactttggaagaagctgtacaaataccagcaaacaggtgttcgatggctgtgggaa
ttgcattgccagcaggcaggcggtattctgggagatgagatgggattgggtaaaaccatc
cagataattgcgttcctggcaggcctaagctacagccggataaggacaagaggctctgat
tacaggtatgaagggcttggtcctagtattattgtgtgcccagccactgtcatgcatcag
tgggtcaaagagttccacacgtggtggccccagttccgtgttgtagttctccatgagact
ggaagttatgctggaaaaaaggtaaaactgattggcgagcttggaaatgggcgtggtata
atcattacctcttattcctatgtacgccttatgcaggaggaactgcaaaagtaccactgg
cattatattattctggatgaaggacacaagatccgtaatcctaatgcaggtgtaacagtt
gcctgtaaacagtttcgcacacctcatcgcatcattctgtcagggtcgcctatgcagaac
aatctgcaggagctttggtctctatttgatttcgtgtttcctgggaaacttggcacattg
cctgtcttcatggaacagttctctgttccaattacaatgggaggatactccaatgcgtca
ccagtacaggtgaaaacagcatacaaatgcgcatgcgtgctgcgtgacacaataaaccct
tatcttctacgtcgaatgaaggctgatgttaagatgatccttgcacttccagaaaagaat
gaacaggttctgttttgccgcctaacagatgagcaaaggcaagtttaccagactttcatt
gattctaaggaggtttatggaattctgaatggagatatgcaggtgttcccaggactcatt
gcactaaggaaaatctgtaatcacccagacctgttttctggaggccccaagattctaaaa
ggcactcgggatgaggatttggaggaggaggagcagtttgggttttggaaacgctcagga
aaaatgattgtggtggaggcacttctgaaaatttggcatcgacaagggcacagagttctg
cttttcacacagtcccgtcagatgattcagataatggaagtgtttgtgagaaccaggggt
tattcttacgtcaagatggatggcactacaaccattgcagccagacaaccactaattaca
aagtataatgaggatccctcgctctttgtcttccttctcactaccagagtgggggggctg
ggtgtgaatttgaccggagccaacagagtgattatctacgaccccgattggaatcctagt
accgatactcaggctcgggagagagcttggcgaattggacagaagaagcaggtcactgtt
tacagactacttactgctggtaccatcgaagaaaaaatctaccacaggcaaatatttaaa
cagtttctgactaaccgtgtgttgaaagacccaaaacagaggcgttttttcaaatctaat
gacctgtatgagctcttcactttaactagtccagacaccagccaaggaaccgagactagt
gccatttttgcaggtactggttctgatgttcaagttgtaaaacgcactgcaaatcatctt
gtaacacattctcaggctgcttcccataaagaactgtctgattccataacaattccccct
tctttacccaaggaaccattaaacccttgcaacaatgtccttcatcagtccaaagaaaat
cctatgcttgatggttcagaaggaaagtctacctccagcacatccataaaagttgactca
ggggaacactgtaaacaagtagctctgactgaggtgcctgaaaacggccatcgcaaacac
aaagcaaaaacgaaacaccaaaacaaagaaggcaaaagagttaagaggaaaaaagatgcc
aagtatgaaggtaaaagaatttcccatttagtgaaacaaaaggcattccttaaagaggaa
gatgatcagcatgaggatcgaagaaaaagcgatgactatgtcctggaaaagctcttcaaa
aaatcaggtgtgcacagcgctatgaaacacgatgttattatggatgctgtaaatccggat
tttgtgctagtggaagaggaagcaagccgtgtagctcatgaggccttgcgagcattaaaa
gtctctcgccagcgttgttatgctgcttcttctggagtcccaacatggaccggaactaac
aaagcgccacctacaggaaccaagcgcagatttggccagaaaaaaaaccctttgctacat
cctgctgatgccccaggcaaactttcccaagacaaatgcaaggactctaatattgcaaag
caggaggatcaatctagctctggtgccccctcacactttagtggagataatcagagtgct
ggctctgccctttcttcatcatcacttctggcacggatgaaggcaagaaataatttgctt
ttaccacaccgtgatgaaaatgaaacaagttcaggagtgtcctcggtagatcctactgag
catgacgagttgctggcagacatgaggaacttcattgcttttcaggcacggacagatggt
gaagccagcacccaggaactgctgcaggagtttgagaataaattatctccgaaacaatcg
tgtgtcttccgcgaacttttaagaaaactttgcacattccataggggtattgatggtact
ggtgtatggcgactaaaacctgaatttcactga
DBGET
integrated database retrieval system
