Xenopus laevis (African clawed frog): 108696425
Help
Entry
108696425 CDS
T01010
Symbol
arhgef12.L
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04270
Vascular smooth muscle contraction
xla04625
C-type lectin receptor signaling pathway
xla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108696425 (arhgef12.L)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108696425 (arhgef12.L)
09153 Circulatory system
04270 Vascular smooth muscle contraction
108696425 (arhgef12.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108696425 (arhgef12.L)
Membrane trafficking [BR:
xla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108696425 (arhgef12.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
108696425
NCBI-ProteinID:
XP_018081257
Xenbase:
XB-GENE-17345521
UniProt:
A0A1L8FLD1
A0A974CGQ6
LinkDB
All DBs
Position
7L:complement(80482833..80594882)
Genome browser
AA seq
1464 aa
AA seq
DB search
MSGTQSAASDRFHSRKPTRHGSILYRESSTDKKLKVERSVSSSHEFDATESSSRKTKSTW
DESRQETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVN
GTLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPNIPLTDSEADVQNSVAIMPPHSPVTQ
GHGKGITSPILMEEENNIVHTQMLDILKKMLQKEQDQLQQFQEEFHTTPSPRLSKEIQDS
KKHISQLQERLSKARGLSQQASESLQISELDADSSDILGRTDYSSGDGSRPNSDIADSPR
SGQRDKSFLEESPEKSEIQDTDSQSSMGSPSIRFTHNIIGAEDDDFDAEPEQSQQINGQC
SCFQSMNLLKSHPAHLAVFIHHVVSQFDPAALLCYLYADLYQQTNSKESRRVFMEFNQFF
LERAANLRVHVPDDVALELEKRRPELIPEELHRQYIQTMQERLTEDVKKNLEDFKQKRSM
GLTLAEGELSKLDSERFRDRNTIEKERACAEQILQKIEEILFSSQTPEDEKSNTIQYVIL
TYMKHLGVKVKEPRSLEQKRGRIGFLPKIKQSMKKDREGEEKVKRRGFPSILAPQRKPSR
QDSNAIGRAMEIQRQRHPKHLSTSSSSSPEPADGSRLRTSGGSIEGSETPFSPSSNLGAA
YTFQEAGREVEGVSRYSGENMSSADTLDGATRTPGPIFDFPSLPLDHLHEETGEADRISD
LGTPKPLRKLDSVVLGDTQSEDEHHEIDQEQDPPNWQQLVSKDTLQKLKPHEIKQQEVIN
ELFCTERAHVQKLSVLDQVFHQRVIRENLLTPADTRNIFSNLEEILQLHVALNEQMKAVK
KRYETSVVEDIGDDVLNWFSGAEEEKLKQAVATFCSNQPFALEMIKSRQKKDLKFLTFVQ
DAESNPLCKRLQLKDIIPTEMQRLTKYPLLLDNIARYSDREDEKEKVNKAANHCRNILDY
VNQAVKEAENKQRLEDYQRRLDLSYLKPGEYPMIDELRNLDLTKRKLIHEGPLTWKVNRD
KSIDLYSLLLEDILVLLQRQDDKLILRCVSKILAATSESKHIFSPVIKLNTVLVRQVATD
NKAFFVISMSKNGAQIYELIANSVSEKNGWQDLITSMAATSKTENPQPTQLQQTAPDIVS
EEEHEDVEQQNVSNDQQEERLHRNSLDKDSDTESLVQPKSFSPSPTHGSILPHHAGILKD
QDQQDFRQATSPSSCHSSTDHHLAVNALRNLELLKQLLVQQLKFLHQDEAENFQQFCSYK
SRGKMESENLTRISSMNKQNRGSRESDQKKELHAQHRATDRRSEHSNTGPDCVANILEEG
GEQFFDAREPRSDPYVDGSRRETNLEEAQFRSSENYLILDGFENVQESSTDDDLSASHYP
TQGPIVCDPTDPLHEEERLAFNALEPTPSSEAFNQMLRYITNIQSDLQQLKGLEDYYNTY
RDRMASSVVLEVESDKAMLPTDKG
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaacacagtctgcagcttcggacaggtttcactccagaaaaccaaccagacac
ggaagcatactttatagagagtcttctacagacaagaagctgaaagttgagagaagtgtt
agctcatcccatgaatttgatgccacagaaagctcgtccaggaagacaaagtctacttgg
gatgagagtagacaagagacctatggtttagttcagcgctgtgtggtaattcaacgtgat
gaaaatggctttggcctgacagtcagtggtgataaccctgtctttgttcagtccgtcaaa
gaagatggcgctgctatgcgagctggagtgcagactggggatcggatcatcaaggttaat
ggcactctggtcacacactccaatcatttagaagtcgtcaagctcataaagtctggctcc
tatgtggcgcttacagtacaaggtcgcccccccgggtcacccaacatccctttaactgat
tctgaggccgatgtgcagaattcggtcgccataatgccccctcattctccagtaacccaa
ggacatggaaaaggaattacaagtcccatacttatggaagaggaaaataacattgtacat
actcagatgctggatatactgaagaagatgctccagaaagaacaagatcagctacagcaa
tttcaagaagagtttcatactactccgtcaccgaggctttctaaggagatccaagacagt
aaaaaacacatatcccagttgcaagaacgattgtcaaaagcaagaggactttcacaacag
gcctctgaatcattgcagatcagtgagctagatgcagactccagtgacatactgggaaga
acagattacagcagtggggatggatcgcggccaaacagtgacattgcagatagcccccgt
agtggacagcgagacaagagcttcctggaggaaagtccagagaaaagtgagattcaggac
acggactctcagtcaagtatgggaagcccctctattcgcttcactcataatattattggt
gcagaggatgatgattttgatgctgagccagagcagtctcagcagataaatgggcagtgt
agctgtttccagagtatgaaccttttgaaatctcaccctgctcacttagcagtatttata
caccatgtggtctcccagtttgatccagcagctctgctgtgttacctgtatgcagactta
taccagcaaacaaattctaaagagtctcgcagagtgtttatggagtttaaccaattcttc
ttagaacgagcagcgaatcttagagtccatgtcccagatgatgttgctcttgaattagag
aaaaggagaccagagctgattccagaggagctacatcgacaatacatccagactatgcaa
gaaaggctcactgaggatgttaaaaaaaacttggaggattttaagcaaaagcgcagtatg
ggactgaccctggcagagggagagctctccaaactggactcagagcgattcagagacaga
aatacgatagagaaggaaagggcctgtgcagagcagatacttcaaaagattgaggagatt
ctgttttcatcacagactcctgaagatgaaaagagcaataccatacagtatgtgatccta
acctacatgaagcatcttggtgtaaaagttaaagagccacgaagccttgaacagaaacgt
ggtcgaattggattcctcccaaaaattaagcaaagcatgaaaaaggatcgggagggggaa
gaaaaggtaaagcggagagggtttcccagtatacttgcacctcagaggaagcctagccga
caagatagcaatgcaattggcagggctatggaaattcagaggcaacgccaccccaagcac
ttatctacatcttcatccagtagccctgaaccagcagatggaagtcgattgcgaaccagt
ggtggctccattgagggttctgaaacacccttctctccatcctctaatctgggtgcagca
tatacctttcaggaggctggcagagaagtggagggagtatctaggtatagtggtgagaat
atgtcctctgcagatacccttgatggggccactcgcacacctggcccaatatttgacttt
ccatcactgccacttgaccacctacatgaagagactggtgaagcagacaggatttctgac
ctgggaacaccaaaacctttgagaaagttggatagcgttgttctaggtgacactcagagt
gaggatgaacaccatgagatagaccaggaacaagatccacccaactggcaacagcttgtt
agtaaagacaccctacagaaactgaaaccacacgagatcaagcaacaggaagtcataaac
gagctgttttgcactgaaagggcacatgtacagaaactcagtgttttggaccaagtgttt
catcaacgcgtgatacgcgagaatctcttaactcctgcagatacccgaaatattttctcc
aacttagaagaaatcttacagcttcatgttgcacttaatgagcaaatgaaagcagttaag
aaacgttatgaaacatccgtggttgaagacattggagacgatgttttgaactggttcagt
ggagcagaagaggagaaactaaagcaggccgtggccacattttgcagtaaccagcccttt
gccttagagatgataaaatctcggcaaaagaaggatctaaaatttctaacctttgtacag
gatgccgagagtaatcctttatgtaaacgactgcagttgaaggatattattcccactgag
atgcagagactaaccaagtatccacttctgctggataacattgccagatattcagatcga
gaggatgaaaaagagaaggtgaacaaagcagcaaaccactgccgtaacatcttagactac
gtaaatcaggcagttaaagaggcagaaaacaagcagagactggaagattatcaacgcagg
ctggacctgtcctatttgaagccaggagagtatcccatgatagatgaactgagaaattta
gatttgaccaagaggaagttgatacacgaggggcctctcacatggaaagtgaatcgagac
aaatcaattgatctttactctttgctgctagaggacatattggttttactccagagacaa
gatgacaagttgattctgagatgtgtaagcaagattctggctgcaacttcagagagcaaa
catatcttcagtcctgttatcaaactcaacactgtgctagtacgacaggtggcaacagat
aacaaggcattctttgttatatccatgtcaaaaaatggggcacagatttacgagctgatt
gccaactctgtttctgagaaaaatgggtggcaagacctgataacaagtatggcagcaaca
tcgaagactgaaaatcctcaacctactcagttacaacagactgccccagatatagtcagc
gaggaagaacatgaagatgtggagcagcagaacgtgtcaaatgatcaacaagaagaaaga
ctccataggaatagtttagacaaagactcagacactgaaagtttagttcagcccaaatcc
ttttctccatcaccaacacatggcagcatcctccctcaccatgcagggattcttaaagat
caggaccagcaagacttcagacaggcaaccagtccctcctcctgtcattcatctacagac
catcacctggcagtgaatgcactgagaaacctggaactgctaaaacagttactggtgcaa
cagctgaagttcctacatcaagatgaagcggaaaactttcaacaattttgcagctataaa
tcaagggggaaaatggaaagtgaaaatcttaccaggatttcaagcatgaataagcagaac
aggggaagcagggagtctgatcagaagaaagaactgcatgctcagcacagggccacagac
agacgttctgaacatagcaacactggcccagattgtgttgccaacattttggaagagggt
ggggaacagttttttgatgctcgtgaaccacgcagtgatccttatgtagatggctctaga
agagagactaaccttgaagaggcacagttcagatcatcagaaaactatctgatactggat
ggctttgagaatgtgcaggagagctccacagatgatgatctctctgcctcacactacccc
acccaaggtccaatagtttgtgatccaaccgatcctttgcatgaggaagaaaggctggcc
ttcaatgccctcgagcctacaccatcttcagaggcttttaaccagatgcttcgttacatc
acaaacattcaatcagacttgcagcagcttaaggggcttgaagactattataacacatat
cgagacaggatggcttcgtcagtggtcttggaggtagagtcagataaggcaatgcttcct
acagataagggttaa
DBGET
integrated database retrieval system
