KEGG   Xenopus laevis (African clawed frog): 108696656
Entry
108696656         CDS       T01010                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108696656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    108696656
Spliceosome [BR:xla03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108696656
 Complex B
    108696656
SSDB
Motif
Pfam: RRM_1 Transformer RRM_occluded
Other DBs
NCBI-GeneID: 108696656
NCBI-ProteinID: XP_018081685
UniProt: A0A1L8FMU9 A0A974HCZ8
LinkDB
Position
7L:109010753..109030087
AA seq 465 aa
MSDFDEFERQLNENKQERDKENRHKKRSHSRSRSRERKRRSRSRERRAREQRSGSKDRRR
RSRSPRNEKKKKIRKYWDIPPPGFEHITPLQYKAMQAAGQIPATALLPTMTPDGLAVTPT
PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDK
NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVP
DSAHKLFIGGLPNYLNDDQVTMESLSLWVKELLTSFGPLKAFNLVKDSATGLSKGYAFCE
YVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQM
GGHPTEVLCLMNMVLPEELIDDDEYEEIVEDVKDECGKYGAVKSLEIPRPVDGVEVPGCG
KIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDGYHRRDFW
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgtccgacttcgacgagttcgagcggcaactgaatgaaaataagcaagaaagagacaag
gaaaatcgccataaaaaacgcagtcacagccgttctagaagccgagaacggaagcgacga
agccgtagcagagaaagacgagctagagagcaacgaagtggatccaaggatcggaggcga
cgcagtcgctcaccaagaaatgagaagaaaaagaagatccgtaaatattgggatattcca
cctcctggttttgagcatatcacgcctctgcagtataaagccatgcaagctgcgggacag
attccagctacagctcttcttccaaccatgactccagatggtctggcagttactcctact
ccagtgcctgttgtgggcagtcagatgacgaggcaggcccgtcgactctatgtcggaaat
attccatttggaatcactgaggaggcaatgatggacttctttaatgctcagatgcgactt
ggtggattgactcaagcacctggaaatcctgtactggctgttcaaatcaatcaagacaaa
aattttgcctttttggagtttcgttctgttgatgaaaccacacaggcaatggcttttgat
gggatcatttttcaaggccagtctcttaaaattaggcgccctcatgattaccagccttta
ccaggcatgtctgaaaacccatctgtgtatgtaccaggggtggtttccacagttgtccct
gactctgcacacaagctattcattggaggtttacccaactatctgaatgatgaccaggta
accatggagtcattaagcctatgggtcaaagaattgcttacatcttttgggcctttaaaa
gcatttaatttggtaaaagacagtgccacaggcctatcaaaaggttatgccttttgtgaa
tacgtggatattaatgttacagatcaggcaattgctggactcaatgggatgcaactgggt
gataaaaagcttttggtgcagagggcgagtgttggagctaagaatgcaactctgagcaca
ataaaccagacaccagtgacccttcaagtccctggtcttatgagttcccaggtgcagatg
ggtggtcatccaactgaagtgttgtgcctaatgaatatggtgctgccagaagaactgata
gatgatgatgagtatgaggagatagtggaggatgttaaagatgagtgtggcaaatacggc
gctgtcaagtcacttgaaattccacggccagtggatggagttgaagtgccaggatgcggc
aagatctttgtagaatttacgtcggtctttgattgtcagaaagccatgcaaggactcact
gggcgcaaatttgctaacagagtggtggttacaaaatactgtgatcccgatggttaccac
cgccgtgatttctggtag

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