Xenopus laevis (African clawed frog): 108696672
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Entry
108696672 CDS
T01010
Symbol
prpf31.L
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108696672 (prpf31.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108696672 (prpf31.L)
Spliceosome [BR:
xla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108696672 (prpf31.L)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF2357
IMP2_N
Motif
Other DBs
NCBI-GeneID:
108696672
NCBI-ProteinID:
XP_018081726
Xenbase:
XB-GENE-17336199
UniProt:
A0A974CGG2
A0A1L8FMZ1
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Position
7L:109958355..109972833
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AA seq
498 aa
AA seq
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MSLADELLADLEEAAEEEEENLIDEDDLETIEEVEEEMQVDLNAESVKSIAKLSDSKLFS
EILLKIDGYIKKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRDKYSKR
FPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLTD
EELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGVAGGLTNL
SKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSEIVQSLPSDLHRKAARLVSAKCTL
AARVDSFHENPEGKIGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRK
IKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEATKARIS
KTLQRTLQKQSVVYGGKSTVRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYFS
SMAEFLKVKSEKSGTMTQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggatgaattgttggctgaccttgaggaggcagcagaagaagaggaggag
aacttaatcgacgaagatgatttggagaccattgaagaggtagaggaagagatgcaagtg
gacctaaatgcggaatcggtaaaaagcatagccaagctatcggatagtaaattgttttca
gaaattcttttgaagattgatggatacatcaaaaaacaaccaaaggcttctgaagtaatg
ggccccgttgaagctgctccagagtacaaagttatagttgatgctaacaatctgactgtg
gagattgaaaatgaactaaatatcattcacaaatttattcgggacaaatattccaagagg
tttcctgagctggagtccttagttccaaatgctttggattatataaggacagttaaggag
ctagggaacaacctggataaatgcaaaaataatgagaatcttcagcaaattctgaccaat
gcaactattatggttgtgagtgtgacagcctccacaactcaggggcagcaattaacagat
gaagaattggaacgaattgaagaagcatgtgatatggcgctagaacttaaccaatccaaa
cacagaatttatgaatatgtggaatcacgcatgtcattcattgcacccaatctctcaatc
attgttggggcctccactgctgccaagatcatgggtgttgctggtggtcttaccaatctc
tcaaagatgcctgcttgtaatgtcatgctgctgggagctcagagaaaaacattatctggt
ttctccagcacatcagtgttgccacatacaggatacatttatcacagcgagatcgtccag
tccctgccatcagacttgcacagaaaagcagcacgactggtatctgcaaaatgtaccttg
gcagcacgtgttgatagttttcatgagaatccagaaggaaagattggatatgacctgaaa
gaggagattgaaagaaagtttgataaatggcaggaacccccaccagtcaaacaagtgaag
ccccttcctgctccactggatggacaaagaaagaaacgcggaggccgcaggtaccgaaaa
attaaggaacgcttgggattaacagaaatccgtaaacaggccaacaggatgagctttgga
gagattgaagaagatgcatatcaggaagatctaggctttagcttgggtcatcttgggaag
tctggaagtggcagaatacgtcaagctcaagtcaatgaagctactaaagctaggatctcc
aagactttacagcgtacactgcaaaagcaaagtgtggtctatggaggaaaatccactgtt
agggatcgatcttcgggtactgcttccagtgttgccttcactcctcttcaggggttggag
attgttaatccacaagcggcagaaaagaaagtggctgaagcaaaccagaagtacttttct
agcatggctgaattccttaaagtgaaaagtgagaagtctggcaccatgacacagtga
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