Xenopus laevis (African clawed frog): 108696859
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Entry
108696859 CDS
T01010
Symbol
ddx19b.L
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
xla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108696859 (ddx19b.L)
03015 mRNA surveillance pathway
108696859 (ddx19b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108696859 (ddx19b.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108696859 (ddx19b.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108696859 (ddx19b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108696859
NCBI-ProteinID:
XP_018082040
Xenbase:
XB-GENE-17331959
UniProt:
A0A974CHH4
A0A1L8FPD8
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All DBs
Position
7L:135943357..135967951
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AA seq
488 aa
AA seq
DB search
MATDSWALAVDEQEAAAETLGKLNLKDEKAVKLKPESNGTDSVENAEQTGRKDGDKSEDD
DDKEDTAAQSLLNKLIRNNLVSNTNQVEVLQRDPNSPLYSVKSFEELRLKPELLQGVYAM
GFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVDPANKYPQCLCLSP
TYELALQTGKVIEQMGQFSNIKLAYAVRGKKLERGQKIPEHIVIGTPGTVLDWCSKLRFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQKMLPQDCQMLLFSATFEESVWRFAQKVVPE
PNIIKLKREEETLDTIKQYYVVCKKREDKFRALCNIYGSITIAQAMIFCHTRKTASWLAG
ELYKEGHQVALLSGEMMVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDGEHSMRILQSIQQHFSKKIEHLDADDI
DEIEKISK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgattcctgggccctggcggtggatgagcaggaggcggcggctgagacgctc
ggcaagttaaacctgaaagatgaaaaagcggtgaagctaaagccagagagcaatggcaca
gacagtgtggagaatgcagagcagactggccgcaaagatggagacaagtcagaagatgat
gatgataaagaggacacagctgctcagtcgttgctcaacaaacttattcggaataatctg
gtcagcaacaccaaccaagtggaggttctgcaacgggatccgaattctcccctgtactct
gtcaagtcgtttgaggagctgagactgaagccagaactccttcaaggtgtctatgccatg
ggattcaacaggccctccaagatccaagagaatgctttgccgatgatgctggctgagccg
cctcagaacctcattgcccagtctcagtcgggtacaggtaaaaccgctgcctttgttctg
gccatgctgagtcgagtggatcctgcaaataaatatccacagtgcttgtgcctctctcca
acctacgagctggctctacagaccgggaaggtcattgaacaaatggggcagttttcgaac
atcaaattggcctacgctgtacgaggaaagaagttggaacgtgggcagaagattccagag
catattgttattggcacgccgggaactgtgcttgactggtgctccaaactgaggtttatt
gatcccaagaagattaaggtgtttgtgcttgatgaagcggacgtgatgatcgccactcag
ggacaccaggatcagagtatccgcatccagaagatgctgccccaggactgccagatgctg
cttttctccgccacattcgaagaatccgtgtggaggtttgcacagaaagtggtgccggaa
cccaacatcatcaaactgaaaagggaggaggagaccctggacaccatcaagcagtactac
gtcgtgtgtaagaaacgcgaagataaattccgagctttgtgcaacatctacggctccata
accatcgcgcaggccatgatcttctgccatacccgcaagactgcgtcctggttggccggt
gagctgtacaaagaaggccaccaggtggccctactgagcggagagatgatggtggagcag
agggcagccgtcattgatcgattccgagatggcaaggagaaagtgttggttacaaccaat
gtgtgcgccagaggtatcgacgtggaacaagtgtccgtggttattaacttcgaccttccc
gtggacaaggatgggaacccggataacgagacctaccttcatagaatcggccgcacgggg
cgtttcggcaagcgaggactggccatcaatatggttgacggtgaacacagcatgagaatt
ctgcaaagtatccagcagcacttcagtaaaaagatcgaacacctcgacgcggatgacatt
gatgaaattgaaaaaatcagcaagtga
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