Xenopus laevis (African clawed frog): 108696973
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Entry
108696973 CDS
T01010
Symbol
XB5799637.L
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X2
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04080
Neuroactive ligand-receptor interaction
xla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108696973 (XB5799637.L)
04082 Neuroactive ligand signaling
108696973 (XB5799637.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108696973 (XB5799637.L)
Ion channels [BR:
xla04040
]
Ligand-gated channels
GABA-A
108696973 (XB5799637.L)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108696973
NCBI-ProteinID:
XP_018082164
Xenbase:
XB-GENE-17336165
UniProt:
A0A8J0TD17
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Position
7L:complement(22440857..22476317)
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AA seq
429 aa
AA seq
DB search
MYFPYRENTAYLLIICSIMTCSAVNAEEKEGEILPPTIQKLMKGYNKYLRPFFDNGPVTV
GMSLDIASIDTISEINMDYTATIFLRQRWTDERLCFEGNKSLSLDGRLVELLWVPDTFIV
DSKKSFLHDITVENRLIRIYPNGTVLYALRITTTVACSMDLTKYPMDKQTCTLQLESWGY
NINDVMFYWTRGNDSVRGLNTLRLAQYTVEDHYTSVSEAVYETGRYPKLVFHFDLKRNIL
YFILETYVPSILLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFI
KAIDVYLGICFSFIFGALLEYAIAHFCSLHQPHQKNSTVKKLVDEDDADMNGTITAVSGG
QNHQNEPADESRNGKQIKRPRDSVLKRLLCVFYCFHVQNPHHIDNYSRLSFPLSFMIINV
IYWVYYLYF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtattttccatacagagagaacactgcgtacctattaatcatctgcagtattatgaca
tgttcagctgttaatgcagaagaaaaggaaggtgaaattctgcctccaacaattcaaaag
ctcatgaaaggatacaacaaatacctacgtcccttttttgacaacggacctgttacagtt
ggaatgagcttggacattgccagcattgacacaatatcagaaataaacatggattacaca
gcgactatatttctaaggcagcgctggacagatgaaagactttgctttgaaggaaacaag
agcctcagtttagacggtcggctggtggaattactttgggtgccggacacattcatagta
gactcgaaaaagtccttcctgcatgacatcaccgttgaaaatcgtctcattagaatttat
ccaaatggaacagttctttatgcgttaaggataaccacaacagttgcgtgcagcatggac
ctaacgaaatatccgatggacaaacaaacctgtactttgcaactggaaagctggggttac
aacattaatgacgttatgttttactggacaagaggaaatgattctgttcgagggctgaat
actctgcgtctggcccaatatacggtggaagatcattacacatctgtgtccgaagctgtg
tatgaaacaggtcgttatccaaagctggtgttccattttgacctgaaaagaaacattttg
tatttcatacttgagacatacgtgccatccatcctgctggttgtactctcctgggtgtcc
ttttggataagtcagtcgtctgtgccagctaggatatgcataggtgtaactacagtccta
accatgacaacacttatgatgggagccagaacatctctgccaaatgcaaactgcttcata
aaggcaattgatgtctaccttggaatctgcttcagctttatattcggggctttgttagaa
tatgctattgctcatttttgttctcttcatcaacctcaccagaagaattcaactgtaaag
aaactggttgatgaagatgacgcagacatgaatggtacaataactgcagtgtccggtgga
caaaaccaccaaaatgaacccgcagatgaaagcaggaatggcaaacaaataaaaagaccc
cgggattcagttctgaaaagattgctgtgtgtattttactgttttcacgtgcaaaaccca
caccacatagacaactattccagattatctttcccgctatcctttatgatcataaatgtt
atttattgggtgtattatttgtatttttga
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