Xenopus laevis (African clawed frog): 108697142
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Entry
108697142 CDS
T01010
Symbol
sorcs3.S
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108697142 (sorcs3.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Others
Others
108697142 (sorcs3.S)
Endosome - Lysosome transport
108697142 (sorcs3.S)
Endosome - Golgi transport
108697142 (sorcs3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
108697142
NCBI-ProteinID:
XP_041426690
Xenbase:
XB-GENE-17341964
UniProt:
A0A8J1LDG5
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Position
7S:complement(671073..802722)
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AA seq
1110 aa
AA seq
DB search
MFRFFFLLLTPSCGGGISVRHCQDVQGGSPRVIGGRKPIFGREEQRAGGSQQDITWPPPG
RRHKRSEGGGQDLRLTSDTFPLTGDFAFNQGMLHWDTNVILILTKLYDFNLGSVTESSLW
RSTDYGTIYEKFNEKVGLKTVLSYLYVSPTNKRKIMLLSDPDTESSLLISSDAGATYQKY
RLNFYIQSLLFHPKQEDWVLAYSLDQKLYSSMDFGRRWNLMHERITPNRFYWSVTGLDKE
PDLVHMEARSADGQAHYITCRIQECSETTRGVPFPRSIDTNSLVVQDEYVFIQVTSGGRA
NYYVSYKREAFAQIKLPKYSLPKDMHIISTDQKQVFAAVQEWNQNETYNLYISDTRGVFF
TLALENVRSSRGIEGNIVIDLYEVSGIKGLFLANKKVDEQIKTFITYNKGRDWRLLQAPD
TDLRGNPITCLLPFCSLHFNLQMSENPYNSGSISSKVTAPWLIVASGNIGSELSPTDTNM
FISSDGGNTWKHIFEEEYNIWYLDWGGALVAMKHTTLPIRHLWLSFDEGRSWTKYAFTSV
PLFVDGALVEPGLDNHIMTVFGHFSLRSEWQLVKVDYKTLFGRKCNENDFENWHLHNQRD
FCVMGERKTYRKRRPGSQCLLEKDYMRTITEPCLCSHWDFECDYGYERHGKNQCSPTFWF
NPTSVSGDCSQGQSYLKSSGYRRIVSNNCTDGLQDQYSAKPQQCLGKAPQGLHLSTADGK
LGVQQGQNVTFLVHLEEGDLQRINIQLDFGDGSAVSYSNFSKIEDGIRHVYKNTGIYQVT
AYAENSIGIDSSIIYLHVMCLVEHVHLRVPFVAIKNKEANASAIVWPSHSGTLTHFWWIG
NSTKPLITLENSISFMFNSEGTNTITVQVASGSTLIQDTKEIAVYEYFQSQLLSFSPNLD
HHNPDIPEWRQDIGGLIKGALVQVTNIPEEHILVAMFPGVPTSAELFVLPHKNASERRKV
SKADLEQIVETILSALNQNLVVFELKPGVQVFVYVTQLTLAPLVDSGSSHSSSAMLMLLS
VVFLGLAVFLIYKFKRKIPWINIYAQVQHDKEQEMIGSVSQNDTTPKISLGNFPDSEELT
DKELDTRVIGTISTIANSESTKEIPNCTSV
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcttcttctttctcctcctgaccccgagctgcggggggggcatctctgtccga
cactgtcaggatgtgcagggggggtcgccgcgtgtgattgggggtcggaagccaatattc
gggagagaagaacagagagcgggggggtcccagcaggacataacgtggccccccccaggc
cggagacacaagaggtcggagggggggggacaagacttgagactcacgagcgacactttc
cccctcactggagacttcgcctttaatcaggggatgttacactgggacactaatgtgatc
ctgattctgactaaactctacgacttcaacttggggagtgtaacggagagctcgctctgg
agatccacagactatggcacaatttatgagaagtttaatgagaaggtcggattgaagacg
gtgctgagctatttgtatgtgagtcccaccaacaagagaaagattatgctgctgagtgac
cccgacacggagagcagcttattaatcagttctgacgccggagccacttaccagaaatac
cgactcaacttctacatccagagtctcctcttccacccaaagcaggaggactgggtgctg
gcgtacagcctggaccagaagctttatagctcaatggattttgggagaagatggaacctg
atgcacgagaggatcacaccaaacagattttactggtctgtaacgggtttagataaagag
ccggacctggtgcacatggaggcccgttctgctgatggacaagcccattatatcacctgt
cgaatccaggagtgttctgagaccacccggggggtccctttcccacgatccattgacacc
aactctttggttgtgcaggatgagtacgtcttcattcaggtgacctctggtggaagagca
aattactacgtgtcatacaaacgagaggccttcgctcagattaaattgccaaaatactcc
ctacccaaggatatgcacattatcagcactgaccagaagcaggtatttgctgccgtccag
gagtggaaccagaacgaaacctacaacttgtacatctccgatacccgcggcgtcttcttc
actctcgctctggagaacgtcaggagcagccgagggatcgaggggaacatcgtcatcgat
ttgtatgaggtatccgggataaagggattatttctggcgaataagaaggtggatgaacag
ataaagacgtttattacttacaacaaaggtcgggactggcgcctgttacaagccccggac
acggatctgagagggaaccccatcacctgcctgctgccgttctgctccctacatttcaac
ctgcagatgtctgagaacccctataactctgggagcatctccagcaaggtgactgccccc
tggctcattgttgcatcagggaacattggctctgagttgtcacccaccgacaccaacatg
ttcatctcctctgatggcggcaacacctggaaacatatctttgaggaggaatataacatc
tggtatttagactgggggggtgccctggtggccatgaaacacacaactctgccgattcgt
catttgtggttgagtttcgatgaagggcgttcatggactaaatacgcttttacttcagtg
cctctgtttgtggatggggcacttgtggaaccaggtctggacaatcacatcatgacagta
tttggccatttcagccttcgctccgagtggcagttggtgaaagtcgactacaaaacttta
tttggaagaaagtgcaacgagaacgactttgagaactggcatttacacaatcagagagac
ttctgtgtgatgggagagagaaaaacctaccggaagcggagacccggatcccagtgtctg
ctggaaaaagactacatgcgaacgatcacagaaccgtgtctgtgctcccactgggacttt
gaatgtgattatggctacgagagacatggaaagaaccagtgcagcccgacattctggttc
aacccaacatcagtctctggggactgcagccaaggacagagctacttaaagagcagcggg
tatcgccggattgtgtccaataactgcacagatggcttgcaggaccagtactcagccaaa
ccccaacaatgtttgggcaaagccccccaaggtctgcacctttctactgctgatggcaaa
ctgggggttcagcaagggcaaaatgtgacgttcttagtgcatttggaagagggtgacttg
caaagaataaacatccagctggactttggtgatggcagcgctgtgtcatactctaatttc
agcaagatagaagatggcatacggcatgtctataagaatacagggatataccaggtcacg
gcatacgcagagaacagcattggcattgacagctcgatcatctaccttcatgtgatgtgc
ctggtggaacatgtgcacctcagggtcccttttgtggccatcaagaataaggaggccaat
gccagtgctattgtgtggccctcacattccggaacactcactcacttctggtggattggg
aatagcaccaagccgctcatcaccttggagaacagcatctcattcatgtttaattccgag
gggaccaacactatcaccgtgcaagtggcgtctgggagcaccttgattcaagataccaaa
gagatcgctgtgtatgaatatttccagtctcagctgctgtcgttctcccccaacctggac
catcacaaccccgacatccccgagtggagacaagacattggggggctcattaagggggcc
ctcgtacaggttacaaatatcccagaggaacacattctcgttgccatgttcccgggtgtc
ccaacttcagctgaactatttgtccttcctcacaaaaatgcgagtgagagaagaaaagtg
agtaaagccgacttggaacaaattgtggaaaccatactcagtgccctcaaccaaaatctt
gtggtgtttgagctgaagccgggagtgcaagtctttgtgtatgtgacccaactgacttta
gccccattggtggatagtggctcaagtcacagcagttcggccatgctgatgctcctgtcg
gtggtgttcttgggtctggctgtgtttttaatctacaaatttaagaggaaaatcccttgg
attaacatttatgctcaagtccaacacgataaagaacaggagatgattggttctgtcagc
caaaatgacaccactcccaaaatatcacttggtaacttcccagattccgaggagctgacg
gataaagaattggacacaagggtcataggcaccatttcaacaatcgccaacagtgaaagc
acaaaagaaattccaaactgtacgagcgtctaa
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integrated database retrieval system
