Xenopus laevis (African clawed frog): 108697201
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Entry
108697201 CDS
T01010
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xla03016
]
108697201
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
108697201
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_17
TPR_8
TPR_1
TPR_14
TPR_11
TPR_CcmH_CycH
TPR_16
TPR_12
CFAP70_TPR_C
RMD1-3
TPR_7
ANAPC3
CFAP70_mid_TPR
TPR_Psidin_N
TPR_15
TPR_MalT
TPR_6
TPR_9
CNOT10_TPR
ARM_TT21_N
ARM_TT21_C
ARM_TT21
TPR_YpiA_C
TTC22_N
TPR_INTS8_3
Iml2-TPR_39
ChAPs
ARM_TT21_4th
HAT_Syf1_M
YPP1_N
Motif
Other DBs
NCBI-GeneID:
108697201
NCBI-ProteinID:
XP_018082607
UniProt:
A0A8J0TE19
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All DBs
Position
7S:complement(25455259..25459609)
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AA seq
489 aa
AA seq
DB search
MSNLSGELLNNHLLKLECHFTWTYFKDETDIDNIEDRLHDQVAFLPSAHRHRLHHLLAYI
SYLKGDNEEAIRQLQEAEEKLQGTQSADLDIKRTVTYSNYAWLYYHSNQFSKAQSYLEKV
EAVYKKFESSPEHDILLTEIYGEQAWALLTFYGKNCERAKECFEKALELDPDNPELNSGY
AIVMYRLERQHDRFYATGKHKAIELLRRAVTLNENDSVIKALLALEYLYAGQAEEGETIM
EEALRQTPDSPYLLRYAAKFYRREGKIDYAITILKKALEQTPTSCSLHHQIGLCYKQKVK
RLKSTRSWNQPTNTYTRDRSEAISSAVFHFEKVIEFKKIFVDAYINLAYMYIEGKQFEKA
EETFQKALNLEILKCEDKQEIHFSYAVFKQEHIRSESEAIRHYKEVLLIPNKTKMRSYSK
NDLEQLAKRRITKEPSDATGFGLLGFIYQQDGEVKQATDYYKKALELDPDNEDFLSALHG
MRLTDLQLK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacctgtctggagaattgttaaataaccatctgcttaaactggaatgccatttc
acctggacttatttcaaagacgagactgatattgacaatatagaagacaggcttcatgat
caagtcgcatttttaccttctgcacacagacataggcttcatcatttattggcctatata
agttatttaaaaggagacaatgaagaagcaattagacagcttcaggaagccgaagagaaa
ctgcaaggaacacagtctgctgatctggatatcaaaagaactgtgacctacagtaattat
gcctggctgtactaccattcaaaccagtttagcaaagctcagtcttacttagaaaaagtg
gaagccgtttacaagaaatttgaatcttctccagaacatgatattcttcttactgagata
tatggagaacaggcctgggctctgttaacattctatgggaagaactgtgaaagagctaaa
gagtgttttgagaaagcgctagagctagatccagacaatcctgagctcaattcaggatat
gccatagtcatgtatcgcttagaacgtcaacatgacagattttatgcgaccggtaaacat
aaagctatagagttgctcagacgtgctgtgacattaaatgaaaatgattcagtgattaaa
gctcttcttgctttggaatatctatatgcaggtcaagctgaagagggagaaacgattatg
gaggaggctcttagacaaactccagactcaccatatttacttcgatatgctgccaaattt
tacagaagagaaggaaagattgattacgctattaccattctcaagaaagccctagaacaa
actccgacttcatgttctcttcatcaccagattggcctttgttacaaacagaaggtgaaa
aggttaaaatctaccaggtcgtggaatcagcctaccaatacctatacaagggacagaagc
gaagcaatttcttctgctgtctttcattttgaaaaagttattgaatttaaaaagatattt
gtcgatgcatatatcaatttagcttatatgtacatcgaaggaaagcagtttgagaaagca
gaagaaacatttcaaaaagcactaaatttggaaattctaaaatgcgaagacaaacaagag
attcacttcagttatgcagtttttaagcaagaacacattagatctgaatctgaagccata
aggcattacaaggaagtattactgataccaaataaaacaaagatgagatcatattccaaa
aatgatttggaacagttggctaaacggagaataaccaaagaaccaagtgatgcaaccgga
tttggactgttagggttcatttatcagcaggatggagaagtcaaacaagcaactgattat
tataagaaagcactggaactcgatccagataatgaggattttttgagtgcattgcatggc
atgagactcactgatttacaactgaaataa
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