Xenopus laevis (African clawed frog): 108697297
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Entry
108697297 CDS
T01010
Symbol
sorcs1.S
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108697297 (sorcs1.S)
Membrane trafficking [BR:
xla04131
]
Protein recycling
Others
Others
108697297 (sorcs1.S)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
108697297
NCBI-ProteinID:
XP_018082701
Xenbase:
XB-GENE-17344063
UniProt:
A0A8J0TER9
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Position
7S:320315..443103
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AA seq
1117 aa
AA seq
DB search
MWGLLVLLLLWGSWGGSGRLIYPSGLLTVRRQNHLGSGQEGGRAGEQRGDTGNRGKSGGR
RLTWVRTEDSRADEQDWISGNRPRNPDKVTAMRDEDSERRTRFRAEEFELKTNSFSLTGD
SAHNQAMVHWSGHNSSVILILTKLYDYNLGSITESSLWRSTDYGRTYEKLNDKVGLKTIL
SYLYVCPTNKRKIMLLTDPELESSLMISSDEGATYQKYRLNFYIHSLLFHPKQEDWILAY
SIDQKLFSSAEFGRRWLLLSEAVAPNRFYWTVTISSRDSDLVHLETKTAEGHAQYIMCRM
SNCSEAARGKPFPGFIDTNSLIVQDEYVFVQLTSGGRPHYFVSYRREPFAQMKLPKYSMP
KDMHVISTDENQVFVAIQEWNQNETYNLYISDTRGIFFTLALENVKSSRGPEGNVMIDLY
EVAGIKGMFLANKKVGSKVKTFITYNKGRDWNLLQAPDSDLKGNAVNCQLPYCSLHLHLK
VSENPYTTGNIASRDTAPGIIVASGNIGSELTETEISMFISSDAGNTWRQIFDEEHSVLF
LDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYTFTSTPLFVDGVLGEPGEETLIMTVFG
HFSHRSEWQLVKVDYKSIFERRCFPEDYLLWQLHSQGETCIMGARRTYRKRKSEHKCMQG
KYARAVSSEPCVCTESDFECDYGFERHSNGQCLPAFWYNLSSLSKDCSLGQSYLNSTGYR
KVVSNNCTDGVREQYTAKPQQCPGKAPHGLRINTLDGKLTAEQGHNVTFVLQLEEGDVHK
TNIQVDFGDGIAASYANLSATEDGIKHVYQNVGIFRVTVKVENNLGSDSALLYLHITAPL
EHIHLLVPFVSTKNKEINASVVLWPSHVGTVTYVWWLGNNSEPIISLERIISFTFSAEGM
NSITVQVTAGNKILQDTKTIAVYEQFQSLRLSFSPNLDDYNPDIPEWRRDISHVIKKSLL
SASGVNSQQILVDVLPGLPTSAELFILPNQWETGENKKNSEDLVQISDLFINKLHQELAH
FELKPGVRVLVHAAHLTAAPLADLSPSHSGSAMLMLLSVVFVGLSVFVIYKFKRKIPGIN
VYAPMQNEKEQEVVSPGSNSENTDPQNQPLGKLETQP
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggcttctggtgctgctgcttctctggggcagttgggggggcagcgggcgcctc
atttacccctcgggtctcctcacggtccggcggcagaatcacttggggtcgggtcaggag
gggggtcgcgctggggaacagagaggagacaccgggaacagagggaagagcgggggtcgc
agactcacctgggtcaggactgaggattctcgggcggacgagcaggactggatctccggg
aatcggccgaggaatcccgacaaagtgaccgcaatgagggacgaggattcggagagaaga
acgaggttccgggcggaggagtttgagctcaaaaccaacagcttctccctcaccggagac
tcggcccataaccaggcgatggtccattggtccggccacaacagcagcgtgattctgatc
ctgacaaagctgtacgattacaacctggggagcatcacggagagctcgttgtggaggtca
acggattatgggaggacatacgagaagctgaatgataaagtcgggctaaagaccattctc
agttacctgtacgtgtgccccacaaacaagcgcaagatcatgcttctaacggaccctgag
ctagagagcagtctgatgataagttcagatgaaggggccacttaccagaagtatcggctc
aatttctacattcacagcctcctcttccacccaaagcaagaagattggatcctggcctac
agcatagatcagaagctattcagctcagcagaatttggccgacgttggctcctgctcagt
gaggctgtggcaccaaatagattttattggaccgtgaccatttctagccgggactcggat
ctggtgcatctggagactaaaactgcagaagggcatgcccagtacatcatgtgccgaatg
tccaactgttcggaggcagcgagggggaagccgttcccgggattcatagacaccaactcg
ctcatcgtacaggatgaatatgtgtttgtgcagctgacatcaggaggaagaccccattac
tttgtgtcctaccgacgggagccctttgcacaaatgaaactgcccaaatactccatgcca
aaggacatgcacgttatcagcaccgacgagaatcaggtgtttgtggccattcaggagtgg
aaccagaacgagacctacaacctctacatatcggacacgcgggggatatttttcactttg
gctctggagaatgtgaagagcagccgtggccccgagggaaatgtaatgatcgacctgtac
gaggtagcagggataaagggaatgttcttggctaataagaaggttggcagcaaagtgaag
actttcatcacgtacaataaggggagagactggaacctgctacaggcccccgactctgat
ctaaaaggaaacgcagtcaactgccagctgccgtactgttccctgcacctccatctgaaa
gtgtcggagaatccctacaccaccgggaatatcgccagccgggatacggcccctgggatt
attgtggcttcagggaatattggatcggagttgacagagacagagatcagtatgttcatc
tcatcagacgccggcaatacatggagacagatctttgatgaggagcacagtgtcctgttc
ctggaccaagggggggttctggtggccatgaagcacacgtccctccccatccgacactta
tggctgagttttgatgagggaagatcatggagcaaatacacctttacttctactccactg
tttgttgatggtgttttgggggaacccggagaagagacgctcattatgacagtttttggc
cattttagtcatcgatccgagtggcaactggtgaaagtggactacaagtcaatatttgag
cgccgttgtttcccagaggattatttgctgtggcagctccatagccagggggaaacgtgc
attatgggggcccgcagaacctacaggaagaggaagtcagagcacaagtgcatgcagggc
aagtatgcaagagccgtctcctcggagccctgcgtgtgcacagagtcagactttgagtgc
gattatgggtttgagcgccacagtaatgggcaatgcttgccagcattctggtacaatctg
tcctcactgtccaaagactgcagcctcgggcagagctacctgaacagcactggttacagg
aaggtggtctccaataactgcacagatggggtgcgagagcagtacacggccaaaccacag
cagtgccccgggaaagcgccgcatggcctgcgaatcaacactctggatgggaagctgacg
gcagaacaaggacataatgtgacttttgttttgcagttggaggagggtgacgtccataaa
acaaatatccaagttgattttggagacggaattgcagcttcttacgccaaccttagcgcc
actgaagatggcatcaagcacgtctatcagaatgtgggcatcttccgagtgacagtgaag
gtggaaaataacttgggctcagacagtgccctcctctacctgcacataacagcccccctg
gagcacattcacctcctggtgccgttcgtcagcacaaagaacaaggagatcaacgcgtcg
gtggttctgtggccgagtcacgttggcaccgtcacctacgtctggtggttgggcaataac
agtgagccaatcatttccctggagagaatcatctctttcaccttctctgctgaaggaatg
aacagtatcacagtgcaggtcacggccgggaataagattctgcaggatacgaagacgatc
gctgtgtatgaacaattccagtccctgcgtctttccttctcaccaaacctggatgactat
aatcctgatattcccgaatggagacgagacatcagtcatgtgattaagaaatcgcttctg
tccgcctcaggcgtaaacagtcaacagatattagtcgatgtccttcccggacttcccacc
tctgccgaactcttcattttgcccaaccaatgggagactggggaaaataagaagaattcc
gaagatctggttcagatttccgaccttttcatcaacaagttgcaccaagagttggctcat
tttgagctgaagccgggggtccgagtcctggtacacgccgcacacctaaccgcagctcca
ttggcggacctgtctcccagtcacagtggttctgcaatgctgatgctcttgtccgtggtc
tttgtgggactgtctgtctttgtcatctataagttcaaaaggaaaatccctggaattaat
gtttatgcaccaatgcagaatgaaaaagagcaagaggtggtcagtccaggcagtaacagt
gaaaacactgaccctcaaaatcagccgctgggcaagttggaaacacagccgtag
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integrated database retrieval system
