Xenopus laevis (African clawed frog): 108697307
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Entry
108697307 CDS
T01010
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108697307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108697307
Membrane trafficking [BR:
xla04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
108697307
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Sec20
CAP59_mtransfer
DUF6730
MFS_2
DUF1664
Orf78
Sec8_N
Laminin_II
Motif
Other DBs
NCBI-GeneID:
108697307
NCBI-ProteinID:
XP_018082717
UniProt:
A0A8J0T5C3
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Position
7S:complement(1684884..1839621)
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AA seq
224 aa
AA seq
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MSAELEGYEQDYAVLTAEITGRIGKVPRLVGDEKKLMILNVEKQLDEARELLEQMDLEVR
EIPVQSRSMYSNRMRSYKQEMSKLDTDFKRSRIAYSDEVRNELLGDDGNSSESQLIKLRE
ERAHLLDNTERLERSSRRLQAGYQVAVETEQIGQGILENLSQDREKIQRARERLRETDTN
LGKSSRVLTGMLRRIIQNRVLVVILGIFIVFTIIMAIYFSIRRH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgagttggagggttacgagcaggattatgcggtgctcaccgccgagatcact
ggcaggatagggaaggtcccccggctggtgggagatgaaaagaagctaatgatattaaat
gtagagaagcagctggatgaggcccgggaactgttggagcagatggacctggaggtgcgc
gagatcccagtgcagagtcgctccatgtacagtaaccgcatgcgcagctacaagcaggag
atgagcaaactggacaccgattttaaaaggtcacggatcgcctacagtgacgaagtgcgc
aatgagctcctgggggacgatgggaattcctcggagagccagttgataaaattacgtgaa
gagagggcacatctgttggataacaccgagaggctggaaaggtcatcgaggaggctacaa
gccggctaccaagtggcggtggagacggaacaaattggccagggcatcctggaaaacctg
agtcaggacagagagaagatccaaagagcaagagaaaggctgagagagacggatacgaat
cttgggaagagttccagggtactaacaggaatgttacgaaggatcatccagaatcgagtg
ttggttgtgatcctgggaatcttcatcgtcttcactattattatggcaatttatttctcc
attcggagacactga
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