Xenopus laevis (African clawed frog): 108697390
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Entry
108697390 CDS
T01010
Symbol
ebf3.S
Name
(RefSeq) transcription factor COE3-like isoform X2
KO
K09103
early B-cell factor
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108697390 (ebf3.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108697390 (ebf3.S)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
108697390
NCBI-ProteinID:
XP_018082867
Xenbase:
XB-GENE-17330439
UniProt:
A0A8J0TBR2
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Position
7S:13044724..13188816
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AA seq
643 aa
AA seq
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MFGIQENIPRGGTTMKEEPLGGGMNPVRSWMHTAGVVDANTAAQSGLGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTTYVDFVEKDKEPNSEKTNNGIHYKLQLLYSNGV
RTEQDLYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTAPSYLENATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QIPSLANTPSHSGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQ
SNYSTVSNSMNGYGNAGMPNLGVPGSPGFLNGSSANSPYGIVPSSPTMAASSVTLPSNCS
STHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQESGEEDGWGGYTAC
KGGGISFYFPFGVCFENGTKHQRLHDTKSSSFRRKLQGTHLVY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaaatataccaagaggtgggacgaccatgaaagaagaaccgctg
ggaggtgggatgaatccagtccggtcatggatgcatacagcaggggtagtggatgctaac
acagcagcccaaagcggcttggggctggctcgggcacatttcgagaagcagccgccttcc
aatctcaggaaatccaattttttccacttcgtcctagccctgtacgacagacaggggcag
ccggtggagattgagaggacaacttatgtggactttgtggagaaggacaaagaaccaaac
agcgagaaaacgaacaatgggattcactacaaactgcaattattgtacagcaatggagtc
aggacagaacaagatttgtacgtacggttaatagattcaatgaccaaacaggcaattatc
tacgaaggacaagacaaaaatcccgaaatgtgcagagttctcttgacacacgaaattatg
tgcagtcggtgctgcgacaagaaaagttgtggcaacagaaacgagaccccctcagaccct
gttatcattgacagattcttcctgaagtttttcctgaaatgcaatcagaactgcctgaaa
aatgcagggaatccgagggatatgcgaagattccaggttgttgtatcaacaacagtcaat
gtggatggccatgtcctggctgtctcagacaacatgtttgtacacaacaattccaaacat
gggaggcgggcgcgccgtctagacccctcagaaggtacggccccttcttatctggaaaat
gctaccccctgcataaaagcgatcagccctagtgaaggatggacaactggaggagctacg
gtgatcattataggcgataacttctttgatggcttacaagtggtttttggaaccatgttg
gtgtggagtgagctgataacaccccatgccatcagagttcagaccccaccaaggcacatt
cctggcgttgttgaagtaactctttcctacaagtcgaagcagttctgtaaaggcgcgcct
ggccgatttgtctataccgctctgaatgaaccaaccatagactatggatttcaaagatta
caaaaagtcattccaaggcatccaggggacccagaacggttaccaaaggaagtactattg
aagcgagcggcagacctcgtcgaagccctctatggaatgccacacaacaaccaggaaata
atcctaaaacgagcagctgacattgctgaagcattatacagtgtgccacgcaatcacaac
cagatcccttcacttgccaacactccatctcacagcgggatgatgggagtaaactctttc
agcagccagctagcagttaatgtttcagagacctctcaagctaatgaccaagtaggttac
agtcgcaacacaagcagtgtttctccacgaggatacgtccccagcagcactccacaacaa
tctaattacagcacagttagcaatagcatgaatggctatggaaatgctggcatgcccaac
ttaggagttcctggatcacccggattccttaacggctcttcggctaactctccttatggc
atagtgccgtcaagccctaccatggcagcctcttccgtcaccctcccttcaaactgtagc
agtacacacggcattttctcattctcacctgccaatgtcatctctgcagtaaaacaaaag
agcgcctttgctcccgttgtcaggccccaagcttcccctccaccatcttgcaccagtgca
aatggaaatggacttcaagaatctggagaggaagatggttggggagggtatactgcatgc
aagggaggtggcatctccttctattttccatttggagtttgctttgagaatggcacaaaa
caccagaggcttcatgatacaaaatcatcaagcttcagaagaaagcttcaggggacacat
ttagtctattaa
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