Xenopus laevis (African clawed frog): 108697400
Help
Entry
108697400 CDS
T01010
Symbol
coe3l.L
Name
(RefSeq) transcription factor COE3 isoform X1
KO
K09103
early B-cell factor
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108697400 (coe3l.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108697400 (coe3l.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
108697400
NCBI-ProteinID:
XP_018082903
Xenbase:
XB-GENE-22166505
UniProt:
A0A1L8HSM8
A0A974I2M1
LinkDB
All DBs
Position
1L:complement(10707783..10781200)
Genome browser
AA seq
589 aa
AA seq
DB search
MFSIQDSLSRGGLSMKEEPLPAALSSVRSWMQNSGIVDSSTAAQSGIGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFIDFVEKDKEQSGEKTNNGIHYRLQLLYSNGL
RTEQDLYVRLIDSMSKQPIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTINVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEAATPCIKAISPSEGWTTGGATVILIGDNFFDGLQVVFGTMLVWSELITP
HAIRVQTPPRHIPGVVEVTLSYKSKHFCKGAPGRFVYTALNEPTIDYGFQRLQKVVPRHP
GDPERLPKEVLLKRAADLVEALYGMPHNNQDIILKRAADIAEALYSVPRNSNQLSSLTAN
HPHSGMMGINSFGSQLAINIAESSQASEQGYTRNTSSVSPRGYVPSSTPQQSNYNTITST
MNGYGGSAMTSLGVPGSPSFLNGSTANSPYAIMPASPPLGASSITLSSSANSATPAGIFS
FSPVNMISAVKQKSAFAPVVRPQTSPPPTCTSSSANNLQAMSGLIVPPM
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgttctctatccaggattcgctctcccggggcgggctgagcatgaaggaggagccgcta
cctgccgccctgtcctccgtccgctcctggatgcaaaactctggaattgtggactccagc
accgccgcacaaagtgggataggcctggcccgagctcacttcgagaagcagcctccttcc
aacctgcgcaagtccaacttcttccactttgtcctggcgctgtatgaccgacagggtcaa
ccggtggagatcgagagaacgtccttcattgactttgtggaaaaagataaagagcagagt
ggggagaaaaccaacaatggaatccattacaggctgcagcttctttacagcaacggactc
aggacagagcaggacctgtatgtgcggctcattgactcaatgtccaaacagccaattatc
tatgaaggacaggataagaatccagagatgtgcagagtgttgctcacccatgagatcatg
tgcagtcggtgttgtgacaagaagagctgtgggaaccgcaacgagacgccctctgatcca
gtgatcatagacagattcttccttaagttcttcctgaaatgcaatcagaactgtctgaag
aatgcagggaatcctcgggatatgagaaggtttcaggtcgtggtttctacaacaataaat
gttgatgggcatgtacttgctgtatctgacaatatgtttgttcataacaactctaagcac
ggcagaagggctcgcagactggatccctctgaagcagccactccctgcatcaaagccatc
agtccgagtgaaggctggaccaccggaggcgctactgtcattctcataggggataatttt
tttgatgggctgcaggttgtgtttggcacaatgctcgtatggagtgagttgatcactccg
catgccatacgagtccagacacccccgaggcacataccaggagtggtggaagtcacctta
tcctacaagtctaagcacttttgtaaaggtgccccgggacggtttgtctatacagcgttg
aacgagccaactatcgactatggattccagagactacagaaggtggttcccagacaccca
ggagacccggagagattacccaaggaggtgttattgaagagagcagcggatttagtggag
gctctgtatggaatgccgcacaataaccaggatattatcctgaaacgagctgctgacatt
gctgaagccttgtatagcgtcccccgtaactccaatcagctttcctcgctgacagccaat
cacccccactcaggcatgatgggaatcaactcgttcggcagccaactggccatcaacatt
gctgaatcctcccaggcatcggaacaaggttacaccaggaatacaagtagcgtctcccca
cgtggttatgtacccagctcaaccccacaacagtctaattataacaccatcacctccacc
atgaatggatatggagggtcagccatgaccagcctgggagtacctggatctccgagcttc
cttaatggctccacggctaattctccatatgcaattatgccagcaagtcctccacttgga
gcatcttccatcaccctttcatccagcgccaactctgccacacctgcaggaatcttttcc
ttctctccagtcaacatgatctccgcggtcaaacaaaagagtgcctttgcgcctgtagtg
cggccgcagacctctccgcctccaacctgcacaagctccagtgcaaacaacctccaagcc
atgtctggccttattgtgccaccaatgtag
DBGET
integrated database retrieval system
