Xenopus laevis (African clawed frog): 108697402
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Entry
108697402 CDS
T01010
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 3 isoform X2
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04114
Oocyte meiosis
xla04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
108697402
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
108697402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108697402
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108697402
Factors involved in mRNA localization
Trans-acting binding proteins
108697402
mRNA cycle factors
P-body specific factors
108697402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
Motif
Other DBs
NCBI-GeneID:
108697402
NCBI-ProteinID:
XP_018082901
UniProt:
A0A974CC49
A0A1L8FEH5
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Position
7S:16089909..16161433
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AA seq
623 aa
AA seq
DB search
MQDDLLMDKNKAQQQPQQSLSSQTQQQQQQKEAPSIAEPSSSRESSPPTHKEKMEMESPL
LPGLSFQHEPPSTSSLSPSIGSTWSTGGTNRAVDDSFFPGVTPVNGTMLFQNFSHHHHHV
NPVFGGTFSPQLGLAHQTQQRRSPASPNNHTAYTQRNAYSHQPILTNKPSSSPNSSSPSP
SNWNNQQNAAWNSPSNPWGALQPGRDPRRAVGVGVGVAVGVPSPLNPISPLKKTFSSNVI
APPKFPRASPLTPKSWVEDNAFRTDNGNTLLPLQDRNRPYDSFNLHTLENSLMDMIRTDH
EPLKARMGLNFHHPGTDNIMALNSRSSLFPFEDGFLGDSHGDQSLSPGLSSPTHCQNGER
IERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDES
SVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGG
VPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQL
QHNDIDKRVEVKPYVLDDQMCDECQGTRCSGKFAPFFCANVTCLQYYCEFCWASIHSRAG
REFHKPLVKEGGDRPRHVPFRWS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgatttactgatggacaaaaacaaagctcagcagcagcctcagcagtctctg
tcctcccaaactcagcagcagcagcagcaaaaggaagctccctctatagcagagccctcc
agcagcagagaaagcagcccccctacgcacaaggagaagatggagatggagtccccctta
ctgcctggtctgagctttcaacatgagccccccagcacctcatctctgtccccttctatt
ggcagcacctggtctactggaggcactaaccgcgctgttgatgacagcttcttcccaggg
gttacgccagtgaatgggaccatgttgttccagaacttttcccatcatcatcatcatgtt
aacccagtatttgggggcaccttctctcctcagctgggcttggctcatcaaacacaacag
aggcgatcccctgccagccccaacaaccacacagcatacacccagcgtaatgcctacagc
catcagcccatcctgaccaacaagccctcgtcctcccccaactcctcatcaccttcccca
tccaactggaataaccagcaaaatgctgcctggaatagcccttctaacccgtggggggca
ctgcaacctgggagggacccacgcagggctgtaggggttggagtaggagtggctgttggg
gtcccatctccactgaaccccatctccccgctgaaaaaaactttctccagcaatgtgatc
gcaccccctaaattcccaagagcatctcctttaacccccaaatcctgggtggaagacaac
gcgttcaggacagataatggcaataccctattgcccctacaggaccggaataggccctat
gactcttttaacttgcacactttggagaattccttaatggatatgataaggactgatcat
gaacctctgaaagctcgaatggggctaaatttccaccatccaggaacagataacattatg
gcacttaacagtcgatcatcgctctttccgtttgaagatggattccttggagatagccac
ggtgaccagtctttatcgccaggcctgagttctccaacgcattgtcagaacggcgaacgg
atagaacgctattctaggaaggtgttcgtgggaggcctgcctcctgacatagatgaagat
gaaatcaccgcaagcttccgtaggtttggaccgctggtggtggactggcctcacaaagct
gaaagcaaatcttattttcccccaaaaggttatgcctttctgctcttccaagacgaaagc
tctgtgcaggctctgatagatgcttgtttagaggaagatggaaagctttatctgtgtgtg
tccagcccaaccatcaaggataaaccagttcaaattcgaccctggaacttgagtgacagt
gactttgtcatggatggttctcaaccacttgacccaaggaaaactatatttgtaggtggt
gttccaagacccctacgagctgttgaactggcaatgataatggatcgcttgtatggggga
gtgtgctacgctggcatcgatacagacccagaactgaaataccccaagggcgctggccgg
gtggcattctccaatcagcagagctacattgctgctatcagcgctcgctttgtccagctc
cagcacaatgacatagacaagagggtggaagtgaagccatatgtgctggatgatcagatg
tgcgacgaatgccagggcacacgctgcagtggaaagtttgctccattcttctgtgccaac
gtgacctgcctgcagtattactgtgagttctgctgggcgagcatccactcccgggctggc
agggaattccacaaaccactggtgaaagagggaggagatcgcccgcgccacgtccctttc
cgctggagctga
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