Xenopus laevis (African clawed frog): 108697493
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Entry
108697493 CDS
T01010
Name
(RefSeq) paired box protein Pax-2-B isoform X6
KO
K15608
paired box protein 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108697493
04131 Membrane trafficking [BR:
xla04131
]
108697493
03036 Chromosome and associated proteins [BR:
xla03036
]
108697493
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108697493
Membrane trafficking [BR:
xla04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
108697493
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108697493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
108697493
NCBI-ProteinID:
XP_018083072
UniProt:
O57682
LinkDB
All DBs
Position
7S:32158067..32227232
Genome browser
AA seq
462 aa
AA seq
DB search
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLA
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGTPVSTPGHTLVPSTASPPVSSASNDPV
GSYSINGILGIPRSNGEKRKRDEDGSDGSGPNGDSQSSVESLRKHLRADNFTQQQLEALD
RVFERPSYPDVFQSAEHIKSEQASEYSLPALTPGLDEVKSSLSASGNADLGSNVSGPQSY
PVVTESFASHLYLKQEPHEASLTPFTPSSLASSGLADIQPFQMALTVDASTPTYSSFTHH
GPPYGQFGSQPLIAGRDMSSTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHP
QYTTYNEAWRFSNPALLSSPYYYSATSRGSAPPTAATAYDRH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcactgcaaggcagatcccttctcggctatgcacccagggcatgggggtgtg
aaccagctcgggggggtatttgtcaacggcagacccctacctgatgtggtgagacagagg
atagtggaactggcccaccaaggagtgagaccctgtgatatctccaggcagctgagggtc
agccatggatgtgtgagcaagatcctgggcaggtactacgagacggggagcattaaacca
ggagttattggcggatccaaacccaaggttgccactcccaaagttgtcgacaaaatcgca
gattacaagagacaaaaccctacaatgtttgcttgggaaatccgggataggcttttggct
gaaggaatctgcgacaatgacacggttcccagtgtgtcctccataaacagaattatcaga
acaaaagtccaacagccgttccatccaacacctgatggaacaccagtcagcacgcctggg
catactctcgttcccagtacagcatctccacctgtctccagcgcatccaatgatcccgta
ggctcttattcaattaatggaatcctgggtattcctcgttctaatggcgaaaagaggaaa
cgcgatgaagatggatctgatggttctggtccaaatggagattcccagagcagtgttgaa
agtttacggaagcatctacgggctgataacttcactcagcagcaactggaggcattagat
cgagtctttgagcgtccttcttatccagatgtctttcagagtgctgaacacatcaaatct
gaacaggccagcgaatactcccttccagcgctcactcctggtcttgatgaagtcaagtct
agtctatcagcatccggcaatgcagacctaggaagcaatgtgtcaggaccccagtcctac
cctgtagtaaccgagagtttcgcctctcacctctatttgaagcaagagcctcacgaagct
tccctaactcccttcactccctcttcattggccagctcggggctggctgacatccagcct
ttccagatggccctcacggttgatgcgtcaacacctacgtacagctccttcacccaccat
ggccccccctatgggcagttcggcagccagccactcatagcaggacgagatatgtcaagc
accactcttccaggttatccacctcatgtacctccaacaggacaaggcagctacccaaca
tcaactcttgctggaatggtacctggaagtgaattttcaggaaatccttatagtcaccct
caatacacaacctacaacgaagcatggaggttcagcaacccagcactattaagttcccct
tattattatagtgccacatccaggggctccgcacctcccactgctgccactgcctatgac
cgccactag
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integrated database retrieval system
