Xenopus laevis (African clawed frog): 108697518
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Entry
108697518 CDS
T01010
Symbol
casz1.S
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108697518 (casz1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108697518 (casz1.S)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d2
Motif
Other DBs
NCBI-GeneID:
108697518
NCBI-ProteinID:
XP_018083110
Xenbase:
XB-GENE-17334614
UniProt:
A0A974CBQ4
A0A1L8FF84
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All DBs
Position
7S:complement(52318785..52628130)
Genome browser
AA seq
1887 aa
AA seq
DB search
MKVDYLSEYDFGLCDYAKRRVCTDTTSGKPKMAAKRKGGLKLNEICAKLSRQVVSEQASD
SGDGDVEPLDIREREGEQTQGGDATDCLNSEQRSAEEDKRRREVIEKWVNGEYTDDPPER
MIKDFKRIGTTEPSPEDVYMVQPKGCSDEEDNTEEPRISKVGKVPEERDVEKPILKEAVE
AAIKQTSGAFAGEASSLRDYAANTMNEFLGMFGYVQPNVRDEIAKKISLEKVIAATSEPH
SAEDALSKRARFSKYEEYIRKLKAGENLSWPPQVTKCDEMNSKTLQVKEGGTQQPAQQPL
TGRLPGIESGIVQETKTSVLPLSTATTSHMQGLMSRASKYDFFIQKLKTGESLRPQNGNT
YKKPSKYDLENVKYLQLFKPGEGNQDMGGSIAFKTGKVGRPSKYDVRNIQKLTPLKAAAV
VPSLTPASLTSNPTTPAPATEQPVTLPFNTPEYLKSTFSKTDSITTGTVSTVKNGLPPDK
PPEDVNMYQKYIARFSGSQHCGHIHCAYQYREHYHCLDPECNYQRFTSKQDVIRHYNMHK
KRDNSLQHGFMRFSPLDDCSVYYHGCHLNGKSTHYHCMQVGCNKVYTSTSDVMTHENFHK
KNTQLINDGFQRFRATEDCGTVDCQFYGQKTTHFHCRRPGCSFTFKNKCDIEKHKSYHIK
DDAYAKDGFKKFYKYEECKYEGCVYSKATNHFHCIRAGCGFTFTSTSQMTSHKRKHERRH
IRSSGVLGLPSSLIGGKDNDIDESSNDDLIDFSAISSKNSSLSASPTSQQSSTPLIPSGS
EAPSPQTNKVTSTVLPNSKVTGLLPQTLPSNIPLALALSSSTPPRTGPYFPIIGGHGTLP
VSGTNLIPVVAPDSSPQSASGASDQNSTLPAAPSIMERISASKGLISPMMARLAAAALKQ
SPSHEAGNGQLSGQQSLGTDCTDTEFTLSQNTSQEHSLDLSLNSESNCQETVSDQPHQAS
LVNKPSSLPGNMLSLKADADSYDCGTVDSTHYLGKVMKALAQEKHKEHWKTYLRRFGPTD
VCDPQCDFLHKLHFHCVVEECGALFSTLDGAIKHANFHFRTDVGTAKGSSDFPFSGDIIN
ASGPSTPPLPSMMLPGCEVPASCPAAVPSAPTLLAWKQLASSIPQIPQIPASMPSLATCP
MTTTSLENAKPQVKPGFLQFHENDPCLATDCKYSNKFHFHCLFGNCKYVCKTSGKAESHC
LDHINPNNSLVNVRDQFAYYSLQCLCPNQHCEFRMRGHYHCLHTNCYFVTNITTKLPWHV
KKHEKAERRAANGFKYFTKREDCRRIGCKYNQVNSHFHCIRDGCQFSFLLKHQMTSHARK
HMRRMLGKHFDRVPGQVVCHAGRSDNSQVTTAPSPSSTDTLSSFQTTPQNFLDTETDEYL
DYTGAGSPDGMSSESSNMDRSCSSTPVGNESAEAGCLVPSASDGALTHNVPLPPPPTATA
VPHAPSFTPSLVRSPLTSLPYLLSPSCVSYSLITASLGVGRGIVVPNNSAPAFTPVIATS
APVKNDVPLVQDAAGNTITMPTASGAKKRFWIIEDMSPFGKRRKTASSRKMLDEGMMLEG
FRRYDLYEDCKDSACQFSLKVTHYHCTRENCGYKFCGRTHMYKHAQHHDRVDNLVLDDFK
RFKSSLSCNFPDCQFSGNSTHFHCLRCGFRCTDSTKVTAHRKHHGKQDVISAAGFCQFSS
SVDCEVSDCKYKLKCSHFHCTYPSCKHTVVGMSQMDSHKRKHEKQERGDLPSVSPGPEIL
TQTGIEYDLQNPPVNLDSSLNLSTDNHSSLLFLQNPVGVGLNDSLDLSKKPQVGAIADSR
QEIQDNLAGHSGDADDFLSQDEDDDDDDEEEEMNDDEEEDEEDLNSDSDDSLPVGECLAR
KEDEESTVGSTNHCDTSQIPLNLQTSP
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgactatttaagtgaatacgactttggactgtgtgactatgctaaaagacgt
gtttgcactgacacaacctcaggaaagccgaagatggctgccaaacgaaaaggcggcctg
aaactaaatgaaatctgtgccaaactaagcaggcaagtggtgtcagaacaggcctctgac
tcgggagatggggatgttgaacctctggatatcagggaaagggaaggggagcaaacacaa
ggaggagatgccacagactgtctgaactctgagcagaggagtgcagaagaagacaagaga
cgcagagaagtaatagagaagtgggttaatggagaatacacagatgacccccctgaaaga
atgatcaaggactttaagaggatagggacaactgaaccttcccctgaagacgtctacatg
gtacaaccaaagggatgtagtgatgaagaagacaacactgaagaaccgagaatttctaaa
gttggtaaagtcccagaggagagagatgtagagaagcctattttaaaggaagcagtagag
gcagctattaaacaaacctcaggggcatttgcaggagaagcctcatccctgcgtgattat
gcagcgaacactatgaatgaatttcttggaatgtttgggtatgtacagcctaatgtgcgg
gatgagattgcaaagaagatcagcttagaaaaagtaattgctgctacctcagagccccat
tctgctgaggatgcactcagcaaaagagccaggttctctaaatatgaggagtatatccgc
aaactaaaggctggagagaacctttcttggcctccacaagtgacaaagtgtgacgaaatg
aactctaaaacactgcaagttaaagaaggtggaacacaacaaccagcacagcagccactc
actggcagactacctggaattgagtcaggcatagtgcaagagacgaaaacttctgttttg
cccctctcaactgctaccacctcacatatgcaaggtctcatgtctagagcttccaaatat
gacttcttcattcaaaagctaaaaactggagaatcactgaggccacaaaatggaaataca
tacaagaagccttcaaaatatgacctggagaatgtcaagtatcttcaattattcaaacct
ggagagggtaaccaagacatgggtggttctattgcttttaagacaggaaaagtgggccgt
ccctccaaatatgatgttcgtaatatacagaaactcaccccactgaaggcagcagcagtt
gttccaagcctaactccagcttctcttacgagcaatcctaccactcctgcaccagcaaca
gagcagcctgtgacattgcccttcaatactccagagtatcttaaatcaaccttctcgaaa
acagattccatcactacagggacagtctccacagtcaagaatggactacccccagataag
ccccctgaagatgtaaatatgtaccagaaatatattgccagattttcaggcagccagcac
tgtgggcacattcattgtgcatatcaataccgcgaacactaccactgcctggatcctgag
tgcaactaccagagatttacaagtaaacaagatgtaattcgacattacaatatgcacaaa
aaacgtgataactctcttcagcatggtttcatgaggtttagccccctagatgactgcagt
gtgtactaccatggctgtcatctgaatgggaaaagcacacactatcattgcatgcaggtg
ggctgtaacaaagtatacaccagcacctctgatgtgatgacacatgaaaattttcacaag
aagaacacacagctgataaatgatggctttcaacggtttcgtgccacagaagactgtggc
actgttgattgtcagttctatggacaaaaaactacccactttcattgcaggagacctggc
tgtagctttacttttaagaacaagtgtgatattgagaagcacaagagctaccacataaaa
gatgatgcttatgctaaagatggtttcaaaaagttctacaaatatgaggaatgcaagtac
gagggctgtgtatacagcaaagccaccaaccactttcactgcatccgtgctggctgtggg
tttacattcacttccaccagccagatgacttcacacaagcgcaaacatgagaggcggcac
atacgcagctctggggtccttggtctcccatcatccctaataggtggcaaagacaatgac
attgatgagtccagcaatgatgacttaattgatttctctgctataagtagtaagaattct
agcttgagtgcctctcccaccagtcaacagtcttccacaccattgatcccttctggttcc
gaggctccttctcctcagacaaacaaagtcaccagcactgttctgcccaacagcaaggtc
actggccttcttccccagactttgcccagtaatatacccttggctttggccctatctagt
tcaacacctccccgaactgggccatattttccaattataggtggacatgggactcttcct
gttagtggcactaacttaattcctgtagttgccccagactcttctccacagtctgcatca
ggagccagtgatcaaaacagcactttgccagctgccccatccattatggaaaggatttca
gcaagcaaggggttaatctcacctatgatggcacgactggcagcagcagccttgaaacag
tctccatctcatgaagcaggtaatgggcagctatctggccaacaaagtttaggcacagat
tgtactgacacagagtttacactatctcagaatacttcacaagagcacagtctggacctc
agtttaaacagtgaatccaattgccaggaaacagtctctgaccaaccacaccaagcatca
cttgtgaataagcccagctctcttcctggaaatatgctcagccttaaagcagatgctgat
agttatgactgtgggactgtggattcaacacattatcttggcaaggtgatgaaggctctt
gctcaggaaaagcacaaagagcattggaaaacatacctacgcaggtttggtcctacagat
gtatgtgaccctcagtgtgacttcctgcacaagcttcactttcattgtgtggttgaagaa
tgtggagccctcttcagcaccttggatggagccataaaacatgcaaacttccatttccgg
actgatgtgggaactgcaaaaggcagctctgacttccctttttcaggagacatcataaac
gcctcaggcccctcaactcccccattgccttctatgatgctccctggatgtgaggtacca
gcttcctgtccagctgctgtcccatcagcaccaactctacttgcatggaagcaactggca
tcctctatcccgcagatcccccaaataccagcttcaatgcccagtctggccacatgtcct
atgacaacaacttccttggagaatgcaaagcctcaagtcaaacctggattcctgcagttt
cacgaaaatgacccctgtctagccacagattgtaaatattcaaacaaatttcactttcac
tgtctgtttgggaactgcaaatatgtctgtaaaacatcaggcaaagctgaatcccactgc
cttgatcacatcaatccaaataatagcctggtgaatgttcgggaccagtttgcatactac
tctctccagtgcctgtgccctaatcagcactgtgagtttagaatgcgagggcattaccac
tgtcttcataccaactgttactttgttactaacatcacaaccaaattgccatggcatgta
aagaagcatgagaaggctgaaagacgagcagcaaatggcttcaagtacttcactaaaaga
gaagactgtagaaggattgggtgcaaatacaatcaggtgaacagtcactttcactgcatt
cgagatggttgccagttctcattcctgctgaaacaccaaatgacatcccatgcccgcaag
cacatgaggaggatgctaggaaaacattttgaccgagtacctggccaggttgtctgccat
gctggcagaagtgacaattcccaggtgaccacagcacccagcccatcatctacagacaca
ctttcatctttccaaactacaccccaaaatttccttgatacggagactgatgaatacttg
gactacacaggggcaggcagccctgatgggatgtcttctgagtcctccaacatggatcgc
agttgctccagtactccagtaggcaacgaaagtgcagaagcaggctgcctggtcccttct
gcctctgatggtgctctcacccacaatgtacctctgccaccacctccaacagcaacagct
gttcctcatgctccttcctttacaccttccttggtcaggtctcctcttacttccctcccg
tatctgctctcaccatcctgtgtttcatactccctaatcactgccagtttgggtgtcggc
aggggcattgtggtgcccaacaacagcgctccagctttcacaccagttatagccacttca
gctccagtcaaaaatgatgtccctctagtacaggatgctgcaggcaacaccatcaccatg
ccaacagcttcgggagctaagaaaaggttttggataattgaggatatgtctcctttcggc
aagagacgcaaaactgcttcatcacgcaaaatgttggatgagggcatgatgttagagggt
ttcagacgttatgatctttatgaagattgcaaggactcagcttgccagttttctttgaaa
gtcactcactaccattgcactagagagaactgtggctataagttctgtggtcggacccac
atgtacaagcatgcccaacaccatgacagagtagacaacctagttctggatgactttaaa
cgattcaaatcctccctaagctgcaacttcccagattgtcagttttcaggcaacagtaca
cactttcactgtttgcgatgtggcttccgatgcactgacagcacaaaagtgactgctcac
cgcaaacatcatggcaagcaagatgtcatcagtgctgctggcttctgccagtttagctct
agtgtagattgcgaagtgtccgattgcaagtacaagcttaagtgttcccactttcattgc
acttatcccagctgcaagcacacggtggtgggtatgtctcagatggactcacacaaacgt
aagcatgagaagcaagaacgaggagaccttccatcagtctccccaggccctgagatatta
actcaaactggcattgaatatgacctccaaaatccaccagttaacttggacagctccctg
aatctgagcacagacaaccacagctcacttctcttcctgcaaaatccagttggagtggga
ttgaatgattcattagaccttagcaagaagccacaagttggggccattgcagactcaaga
caagaaattcaggacaatctagcagggcactctggagatgctgatgactttttatcacag
gatgaggatgatgatgacgacgatgaagaagaagaaatgaacgatgacgaggaggaagat
gaggaagatcttaattcagattcagatgactccttacctgttggtgaatgtttagcaagg
aaagaagatgaagaaagtacagtgggttctacaaatcactgtgatacttcacaaatccct
ttaaatctccaaacatccccttaa
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