Xenopus laevis (African clawed frog): 108697536 Help Entry 108697536         CDS       T01010                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism xla  Xenopus laevis (African clawed frog) Pathway xla03040   Spliceosome xla04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:xla00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     108697536   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     108697536  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:xla03041]     108697536    04121 Ubiquitin system [BR:xla04121]     108697536    03400 DNA repair and recombination proteins [BR:xla03400]     108697536 Enzymes [BR:xla01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      108697536 Spliceosome [BR:xla03041]  Complex B   Other components    Prp19 complex     108697536  Complex C    Prp19-CDC5 complex     108697536 Ubiquitin system [BR:xla04121]  Ubiquitin ligases (E3)   U-box type E3    108697536 DNA repair and recombination proteins [BR:xla03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     108697536 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_TEP1_C NBCH_WD40 U-box Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_RIG_2nd PEP5_VPS11_N WD40_RFWD3 Beta-prop_DCAF4 PROPPIN Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_DCAF12 Ge1_WD40 zf-Nse RMC1_N Beta-prop_WDR35_TULP_N BCAS3_WD40 Cytochrom_D1 Beta-prop_Nup120_160 ATG16 Motif Other DBs NCBI-GeneID:  108697536 NCBI-ProteinID:  XP_018083155 UniProt:  A0A1L8FFG3 A0A974CBS7 LinkDB All DBs Position 7S:49917502..49937554 Genome browser AA seq 504 aa AA seqDB search MSLTCYISNEVTDRPCISPVSGHIFDRRLIEKYLAENGTDPVTNQPLSEDQLIDIKVAHP IRPKPPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGISVPQAIPMPQTGAAGSAEAMELGELVGMSAEIIQKLQDKA TVLTTERKKRGKTVPEDLVKPEELSKYHQVSSHMGLHSASVPGILALDLCPTDTNKTLTG GADKSVVVFDALSQQILATLKGHTKKVTSVVFHPSQELVFSSSPDSTIRVWSVPDSSCAQ VLRAHEGAVTGLSLHATGDYLLSCSDDQYWAFSDIHVGRVLTKVTDESSGCALTCAQFHP DGLIFGTGTMDSQIKIWDLKERSNVANFPGHSGPVSCIAFSENGYYLATAADDSSVKLWD LRKLKNFKTLQLEEGYQVCSLVFDQSGTYLAVGGTDIQVYICKQWAEVLHFTDHSALTTG LAFGQNAKFLASTGMDRSLRFYSL NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgtctttgacttgttatatcagtaatgaggtcacagaccgtccctgcatttccccggtg tcgggtcatatttttgatcgacgccttattgaaaagtatttggctgagaatgggaccgat ccagtaacgaatcagcccttaagtgaggaccagttgattgacatcaaagtagcccatcca attcgtcccaaaccaccttctgcaaccagtattccagcaatcctaaagtcattacaagat gagtgggatgcagtaatgctccacagctttacattgcgtcaacaactacagaccactcgc caggagctatctcatgcactctaccagcatgatgctgcttgtcgtgtcattgctcgtctt acaaaggaagtgacagctgcccgtgaagctcttgctacgttgaagcctcaggctggaata tctgtgcctcaagccatccctatgccacagactggagccgctggctctgcagaagccatg gaacttggtgaattggttggaatgtcagcagaaattattcaaaagcttcaagacaaagca actgtgcttactacagaacgtaagaagcgtggtaaaactgtcccagaagatctggttaag cctgaagaactcagcaaatatcaccaggtttcctctcatatggggctacacagtgcaagt gtccctggtattttggcactggatttgtgtccaactgacacaaacaaaactcttactggt ggggcagacaagagtgttgttgtgtttgatgccctgtcacaacagatccttgctacactt aaaggtcatacaaagaaagttaccagtgttgttttccacccctctcaggagctagtgttt tcttcttctccggactccacaatacgtgtctggtctgttcctgattcatcctgtgctcaa gtgttacgagctcatgaaggggcagtgactggtctgagtttacatgcgactggagattac ttactcagctgttctgatgatcagtactgggcattctctgatatacatgtgggccgtgta ctcaccaaagtgacagatgaatcttctgggtgtgctctcacttgtgcccagtttcaccct gatggtctcatttttggcactggaacaatggactcccaaattaagatctgggatcttaag gaacgctcaaatgtggctaatttccctggacactcaggtcctgtatcatgcatagctttc tctgagaatggttattatctggctacagctgctgatgactccagtgtcaaactgtgggat ctgcgaaaactgaagaacttcaaaacactgcaacttgaagaaggatatcaggtgtgctct ctggtgtttgatcagagtggtacatatttggcagttggtgggacagatattcaggtttac atctgcaagcagtgggctgaagttctgcacttcacagatcacagcgctcttacaactggc cttgcatttggtcagaatgccaagttcttggcctccacaggaatggatcggagtctgcgt ttttacagtctttaa

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