Xenopus laevis (African clawed frog): 108697684
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Entry
108697684 CDS
T01010
Symbol
chd5.S
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108697684 (chd5.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108697684 (chd5.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
108697684
NCBI-ProteinID:
XP_018083446
Xenbase:
XB-GENE-17344102
UniProt:
A0A8J0TGD0
LinkDB
All DBs
Position
7S:complement(86096007..86229588)
Genome browser
AA seq
1938 aa
AA seq
DB search
MEAIDFFSEELPPKRKKSKKSKEGKLSKTKRRKKEGSDEDVSENQDELEEKSESEGSDYA
PNKKKKKKLKEKKEKKAKRKKKDDDDDENEEGGIKEPKTSSQLMEEWGLDNVDYVFSEED
YHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPLKGSSAAAAAAAVA
AAVETVVVSPPLLVLPPQPVQPAPIRKAKTKEGKGPGVRKKSKPSKDNKKKAKGKKVANL
KFKFGGVASKRKKGSSSEEDEREESDFDSASINSSSVRSDISAGLGKRGKKVKKKKRVEE
GDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQW
EPKEDDEDEEDGGEEEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNG
EWLCPRCTCPPLIGKVQRILHWSWREPPPPSSFPSDIDPLMPPPKPVDGIPEREFFVKWA
GLSYWHCSWVKELQLELYHTVMFRNYQRKNDMDDPPPYDYGSGDEDGKSEKRKNKDPLYA
KMEEKFYRYGIKAEWMMIHRIMNHSFDKKGDVHYLIKWKDLPYDQCTWEINNIDIPDYEN
QKHSYWDHRELMLGEDARPLRFKKNKKTKDENLEKPPLAPIVDPTVKFDKQTWYIDSTGG
TLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL
STIINWEREFEMWAPEFYVVTYIGDKDSRAVIRENEFSFEDNAIKSGKKVFRMKKEAQIK
FHVLLTSYELITIDHAILGSIEWACLVVDEAHRLKNSQSKFFRVLNSYKIDYKLLLTGTP
LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDVLGPHMLRRLKADVFK
NMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKAGGNQVSLLNIMMDLKKCCNHPYL
FPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLKDGGHRVLIFSQMTKMLDLLED
FLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIY
DSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLG
SKSGSMSKQELDDILKFGTEELFKDDVEGESIKKQIADQHCGTLTAYKKTGDNKDVEDSS
VIHYDDAAISKLLDRNQNATEDTDIQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEE
NVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDDLSDNHSEYS
VGSEDEDEDFEEKPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNA
IMRWGMPPQDAFNSNWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGL
SRQHVLTRIGVMSLVRKKVQEFDQVNGKYSTPDLIPESVQNKKCFDLVSSDPNTPVAASP
APLPPGATTVTEKCDGQSVLQEDSEMVELKPKYPAEAQPNAKQEKSEQEELNEDLDMKEI
KMKDTEEDEEKESTDQVSKAAETHEEQEKPSEKSESCVTTNKVEDNELKTGTSEDNKPDE
KEECETQQNGENDIKQEEDEGKKEDKNSKFKFMFNIADGGFTELHTLWQNEERAAISSGK
MYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYLILNEPFKSEIHKGNYLEMKNKFLAR
RFKLLEQALVIEEQLRRAAYLNMTQDPNHSAMALNARLAEVECLAESHQHLSKESLAGNK
PANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRGGDQT
IQGTFGSSQMYNNNFGPNFRGPGPGSIVNYSQMPLGPYVTASNGTHSAYPDKKMIDSLKD
CASLDRKGRLSDIIFIED
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaatagactttttttctgaagaactcccccctaagagaaagaaatccaaaaaa
tccaaggaaggcaaactatcgaaaactaaaagaagaaaaaaagagggaagtgatgaggac
gtatcagaaaatcaagatgagcttgaggaaaagtcagaaagtgaaggaagtgattatgct
cccaacaaaaagaagaagaaaaagctcaaagaaaagaaagaaaaaaaagctaaacgtaaa
aagaaagatgatgatgatgatgaaaatgaagaaggtggaattaaggagcctaaaacttca
tctcagttaatggaagagtggggcctagacaatgtggactatgttttctcagaggaagat
tatcatacattgaccaactacaaggctttcagtcagtttctcaggcctttaattgcaaag
aagaatccaaaaatcccaatgtcgaagatgatgactgtacttggggcaaaatggagggag
ttcagtgctaataatccactaaagggaagttctgcagcagctgcagctgctgcggtcgca
gcagcagttgaaactgtggttgtttctcctccactattggtccttcccccccaaccagtc
caacccgcacctataaggaaggcaaaaaccaaggaaggaaaaggacctggtgtaaggaaa
aaatctaaaccgtccaaggataacaagaaaaaagctaaaggcaagaaagtggcaaacctc
aaatttaaattcggaggggtggccagcaaaagaaaaaaaggttcatcaagtgaggaggat
gaaagagaagagtccgactttgacagcgccagcatcaacagctcatctgtgcgttccgat
atcagtgctggattaggaaagagaggcaaaaaagtaaagaaaaagaagagagttgaagaa
ggtgacggttatgaaacagaccatcaggattactgcgaagtttgtcagcagggaggggaa
atcatattatgtgacacatgcccccgtgcctatcacctcgtctgcctggatcctgaactg
gaaaaagccccagagggcaagtggagttgcccacactgtgaaaaagaaggtatccaatgg
gaaccaaaggaagatgatgaggatgaagaagatgggggagaagaagaagaggaggaagat
gaccacatggagttttgtcgtgtttgtaaagatgggggtgaacttctgtgctgtgacact
tgtccctcttcttatcatttgcactgtcttaacccacctttgcctgaaataccaaatggt
gaatggctgtgccctcgttgtacgtgtccacctttgataggcaaagttcaacgaatacta
cactggtcatggagagaacctccccctccatcaagcttcccctccgatatagatcccctc
atgccacctccaaagcctgtcgatggcattccagaaagagaattctttgtcaaatgggca
gggctgtcctactggcactgctcctgggttaaggaattacagctagaattgtatcataca
gttatgtttcgtaattaccaaagaaagaatgacatggatgacccacctccgtatgactat
gggtctggggatgaagacggcaaaagtgaaaaacggaaaaacaaagatccgctgtatgca
aagatggaagaaaagttttaccgatatggcataaaagcagaatggatgatgatacatcga
ataatgaatcacagttttgataagaagggagacgttcattatctgatcaagtggaaggac
ctgccttatgatcagtgcacatgggaaatcaacaatatagacattccagattatgaaaac
cagaaacactcttactgggaccacagggagttgatgctcggtgaagatgcaagacctctt
agatttaagaagaacaaaaagacgaaagatgagaatctggaaaaaccacctttagcccca
atagttgatccaactgtaaagtttgataaacagacttggtacatagattctacaggagga
acgttacacccttaccagttagaaggattgaactggttaaggttttcctgggcacaagga
accgatactattcttgcagacgaaatgggtcttggcaagactgtccagactattgttttc
ctctactccctttacaaagagggtcattccaaaggtccatatttggtcagtgcaccattg
tcaactatcatcaattgggaacgggaatttgagatgtgggcaccggaattttatgttgta
acatacattggtgataaagacagtcgagcagttataagagaaaatgagttttcttttgaa
gacaatgccatcaaaagtgggaagaaggtgtttcgcatgaaaaaagaagcccagataaaa
tttcatgtgctgcttacatcttacgagctaatcacaattgatcatgctatcttgggttct
attgagtgggcatgccttgtagtggatgaggcacaccggctgaaaaacagccaatcgaaa
ttctttagggtattaaatagctacaagattgactataaactgctgctaactggaactccg
cttcagaataatttagaagaacttttccatcttctcaatttcctgacacctgaacgattt
aataacctagaagggtttttggaagagtttgcagacatctccaaggaagaccaaattaag
aaacttcatgacgtgctgggaccccacatgctgaggcggctgaaagcagatgtctttaag
aacatgccagccaaaacagaattaatagtacgagtggagcttagccaaatgcaaaagaag
tattataagttcatattaacaagaaactttgaggctttgaattcgaaagcaggtggaaac
caagtttcattgctcaacatcatgatggacctaaagaagtgctgtaatcacccttatctc
tttcccgttgctgctgtggaggccccagttttgccaaatggatcatacgatggaaattct
ttggttaaatcttctggcaagctgatgcttctacaaaaaatgctgaagaaactaaaggac
ggagggcacagggtgctgattttttctcagatgacaaaaatgctggacttacttgaagat
tttttagaatatgaaggctataaatatgaacgaatagatggaggaattacaggagggcta
cgccaggaggcgattgacagatttaatgctcccggtgctcagcaattctgctttctcctg
tccactcgagctggaggtctgggtataaatttagctactgctgatactgtaataatttat
gactcagactggaaccctcacaatgacatacaggcattcagcagagctcacaggatcggg
cagaataaaaaagtgatgatctaccggtttgtcactagagcctctgtagaagagagaatc
acacaggtggcaaagaggaaaatgatgttgacccacttggtcgtgcggccaggacttggg
tctaaatcggggtctatgtcaaagcaagaattggatgatattttaaaattcggcactgag
gaactgtttaaagatgatgttgaaggcgagagtattaagaaacaaattgctgaccagcat
tgtggtaccttaaccgcgtacaagaaaactggtgataacaaggatgtggaagacagcagt
gttatccactatgatgatgctgccatttcaaaacttttggaccgaaaccaaaatgcaacc
gaagatacggatatccaaaatatgaacgaatatctaagttcttttaaagtggcccagtat
gttgtgcgggaagaagatggtgtggaggaagtggaacgagaaataattaaacaggaagag
aatgttgatccagattattgggaaaagctgcttcgtcatcattatgagcaacagcaggaa
gatcttgccaggaatctcggcaaagggaagcgcattcgcaagcaggtcaactacaatgat
gcctcacaagaggaccaagaatggcaagatgacctgtctgacaaccactcagagtattca
gttggttcagaagatgaggatgaggattttgaagagaagcctgaaggtggcagaaggcag
tctcgacggcaattaaagagtgacagagataaaccacttcccccacttctggcaagagtt
ggaggaaacattgaggtccttggatttaatgcccgacagcgcaaagcctttttaaatgca
attatgagatggggaatgccaccacaagatgcttttaattcaaactggcttgtccgagat
ctcagaggaaagagtgagaaagaattcagggcatacgtgtccttatttatgagacatctg
tgtgaacctggagcggatggagcagaaacctttgctgatggggttcctagagaagggctg
tcacgtcagcacgttctcactagaattggagtcatgtcactggttcgaaagaaggtgcaa
gaatttgatcaagtcaatggaaagtacagtaccccagatctaatcccagagagtgtacaa
aacaaaaaatgttttgatctggtttcctctgatccaaacacaccggtagcagccagtcca
gctccattgcctcctggagcaacaacagtgacagaaaagtgtgacgggcagtctgtgctg
caagaggactctgagatggtggagctcaagcccaaatatcctgcagaggcacagcctaat
gccaaacaggagaaatctgagcaagaagaattaaatgaggatttggacatgaaagaaatt
aaaatgaaggatacagaagaggatgaggaaaaagaatcaacagatcaggtttctaaagca
gctgagacccacgaggagcaagaaaaaccatcagagaagtcagaatcctgtgtaacaaca
aacaaagtagaggacaatgagctcaaaacgggtacaagtgaagataataaaccagatgaa
aaggaagaatgtgagacccagcagaatggtgaaaatgatatcaaacaggaagaggatgaa
ggaaaaaaagaagataaaaatagcaaatttaaatttatgtttaatatcgcagatggtgga
tttacagaacttcacacactgtggcaaaatgaagagcgagctgcaatctcctcggggaaa
atgtatgatatatggcatagaagacatgattactggcttctggctgggattgtcacacat
ggttatgcccgctggcaggatattcagaatgacccccgctatttgatcttaaatgagccg
tttaagtcggagattcacaaaggaaattatctagaaatgaaaaacaagtttcttgctcgg
agattcaagctattagaacaagcgttagtgatcgaagagcagctgcgaagggcagcctat
ctcaacatgactcaagacccaaatcactcggccatggcactcaatgcgcgactagctgaa
gtggaatgtctcgctgagagccatcagcatctctccaaagagtctcttgcaggaaataag
ccggctaatgctgttcttcacaaagttctgaatcagctggaagagttgctaagcgatatg
aaggcagatgtgacccgtttaccctcaatgctgtctagaataccgcctgttgcagcccgc
cttcagatgtctgagcgcagtattcttagtagactcaccaaccgaggaggtgaccagact
atccagggaacatttggatcctctcaaatgtataataacaactttggccccaatttccga
ggacctggtcctggcagcattgtcaactacagccagatgcctcttggaccatacgtgact
gcatccaatgggacccactcggcatatcccgacaagaaaatgatcgattccctaaaggat
tgtgcgtcattggatcggaaagggagactcagtgacatcatctttattgaagattaa
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integrated database retrieval system
