Xenopus laevis (African clawed frog): 108697748
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Entry
108697748 CDS
T01010
Symbol
ntn5.S
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xla00536
]
108697748 (ntn5.S)
Glycosaminoglycan binding proteins [BR:
xla00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108697748 (ntn5.S)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
EGF_2
BNR_6
Motif
Other DBs
NCBI-GeneID:
108697748
NCBI-ProteinID:
XP_018083574
Xenbase:
XB-GENE-22063029
UniProt:
A0A1L8FGS1
A0A974CCV7
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Position
7S:complement(92799135..92873846)
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AA seq
601 aa
AA seq
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MPRILWGFIPFYIISLLCPVPRGQENNSNKASTHGGTPDGPCYDAKQRPKYCIPDFINVA
LGQEVITSNTCGRTPQKLCYFLDSTNVTSRRCQLCDHKNPENSYPPSYMTDTDAQTCWKS
ESGITFPQNVTLTLPLGRRFELVYVSLRFCSPRPDSMAIYKSMDYGKTWIPFQFYSTHCR
RVYDQATTSAISKPMQHEATCTDFQTGVKPLTKGLVAFMPLAGRPSARRFEYSPVLQDWV
TATDIRVVFNRLHHGKKMGIRRKTAFYGVSEIQVGGRCKCNGHASRCTASKEGLMCECQH
NTLGPECDACKPFYYDRPWQRATPSNAHECVACECNLHSHRCRFNMELYKLSGRKSGGVC
LNCRHNTAGRHCHYCKQGYKRDLTKPITSRKACKPCQCHPIGAVNAMCNQTTGQCQCKTG
VTGPTCNRCAPGYQQSQSAHMPCVRVQEEMTTTASYPHEWKAGINGTECQSYCKPSHSRV
HMNLRKYCKKDYVLRAQLLSMEKSGEWWQFTATVLTVYRQRRVPIRRGDQPLWVPDRDLA
CDCLRVQVGKSYLIIGNDEESPDPARLILDKNSLSLPWRDVWGHKLRHFQQQERRGKCRV
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaattctgtggggttttatccctttttatatcatttccttgctgtgcccggtg
cccaggggacaggaaaacaattctaataaagcttcaacacatggcgggactccagatggc
ccctgttatgatgccaaacagcggccaaagtactgcatcccggattttatcaacgttgct
cttggacaagaggtaattacttcgaacacgtgtggccgaacgccacagaaactctgctat
tttctggattcaaccaatgtgacatcacgcaggtgtcaactgtgtgaccataaaaacccc
gagaactcctacccaccctcctacatgaccgatacagatgcccaaacatgttggaagtca
gagagtggaataacatttccccagaatgtcacattaactttgccactggggcgtagattt
gaattggtttatgttagtttacgtttttgctcgcctcggccagactccatggcaatctat
aaatcgatggattatggtaaaacttggattcctttccagttctactcaactcactgtcgt
cgtgtctatgatcaggctaccacaagtgctatatcaaaacccatgcagcacgaagccaca
tgcactgacttccaaacgggggtgaaacctctaactaaaggacttgtagcatttatgcct
ttagccggccgcccttcggcccgcagatttgagtatagtcctgttctacaagactgggta
actgccacagacataagggtggtgtttaaccgtctccaccatggaaagaaaatgggaatt
cgaaggaaaacagctttctatggtgtttctgaaatccaggttggaggaaggtgtaaatgt
aacggccacgcatcccgctgcacagccagcaaggagggacttatgtgtgaatgtcaacac
aatacacttgggccagaatgtgatgcctgcaaaccattttattatgacaggccttggcag
agagcaacgcctagcaatgcacacgagtgtgtggcttgtgagtgtaacttacactctcac
cgatgtcgctttaacatggagctatacaagctctcgggtcgaaagagcggaggcgtctgt
ctcaactgccggcacaacactgctggtcgtcactgccactactgcaagcagggctacaaa
cgggatctgaccaagcctatcaccagcaggaaggcatgcaaaccttgccagtgtcaccca
ataggagcagtgaatgcaatgtgcaaccaaaccacgggccagtgtcagtgtaaaaccggt
gtgactggtccgacctgcaaccgctgtgccccaggataccagcagagtcaatcagcccat
atgccctgcgtccgagttcaagaagagatgacaactacagccagttatccacatgaatgg
aaagcagggataaacggtacagagtgccaatcatattgcaagccctcccatagtcgtgta
catatgaacttacgcaagtattgcaagaaggattatgttcttcgagctcagctcttgtct
atggagaagtctggagaatggtggcaatttacagctactgtccttacagtatacagacag
cgcagagtgcctattcgccgtggggaccaaccactttgggttccagatcgagatctggca
tgtgactgtctcagagtgcaagtgggaaagtcctatctgatcattggcaacgatgaagaa
tctccagatccggctcgtctgattttagataagaatagcttgtcccttccttggcgagat
gtgtggggccacaaactgagacacttccagcagcaagaacgtcgcggaaaatgcagggtg
ggataa
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