Xenopus laevis (African clawed frog): 108698051
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Entry
108698051 CDS
T01010
Name
(RefSeq) slit homolog 2 protein isoform X16
KO
K06839
slit 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xla00536
]
108698051
Glycosaminoglycan binding proteins [BR:
xla00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108698051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
EGF
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
LRRCT
LRR_1
EGF_TEN
hEGF
LRR_14
EGF_DL_JAG
LRR_EndoS
EGF_Teneurin
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
108698051
NCBI-ProteinID:
XP_018084394
UniProt:
A0A8J0TGL6
LinkDB
All DBs
Position
1L:31492073..31690197
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AA seq
1530 aa
AA seq
DB search
MLPSVVKKKMCYVGFWKLSISLGLVLVTLSEVAPQPCPSQCSCSGTTVDCHGLTLRSVPR
NIPRNTERLDLNANNITRISKTDFAGLRHLRILQLMENKITTIERGAFQDLKELERLRLN
RNNLQVFPELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAF
RALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVG
LYTQCMGPIHLRGHNVAEVQKREFVCTGQQSFMVHSCSVLHCPAACTCSNNIVDCRGKGL
TEIPTNLPETITEMRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEIAADAFQGLRSLN
SLVLYGNKITELPKGVFEGLFSLQLLLLNANKINCLRVDSFQDLHNLNLLSLYDNKLQTI
AKGTFSPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQI
KSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELR
LNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGANGVNELLLTSNRMENVRH
KMFKGLEGLKTLMLRSNRISCVNNDSFTGLSSVRLLSLYDNQITTVAPGAFDALHSLSTL
NLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNEDN
SCSPLSRCPAECTCLDTVVRCSNKGLKSLPKGIPKEVTELYLDGNMFPLVPKELSNFKHL
TLIDLSNNRISTLSNHSFSNMTQLLTLILSYNRLRCIPLRAFDGLKSLRLLSLHGNDVSA
IPEGVFSDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCSGPGEMADKLLLT
TPSKKFTCNGPVDVNILAKCNPCLSNPCKNDGTCNNDPVEFYRCTCPYGFKGQDCDVPIH
ACISNPCHNGGTCHLKEGDKEGFWCACADGFEGENCEVNIDDCEDNDCENNSTCVDGINN
YTCHCPLEYTGELCEEKLDFCSQDVNPCQHDSKCILMLKGYKCDCTPGYIGEHCNIDYDD
CQENKCRNGARCVDAVNGYTCICTEGYSGLFCESAPPMVLPRTSPCDNFECQNGAQCIVK
GNDPLCQCLPGYQGNKCEKLVSVNFVNKDSFLQIPSTKIRTQANITLQVATDEDSGIVLF
KGDRDQVAVELYRGRVRVSYDTGSNPASAIYSVETINDGNFHVVELVNLDQTLSLIIDGG
TPKSITNLPKQSLLSVDSTLYIGGMPLKNNIAGLRQSSSKNGTNFQGCIRNLYINNELQD
FRKLNLQAGVLPGCEPCHKKVCVHGTCLATSQAGFTCECEGGWTGQLCDIQSNDPCLGNK
CVHGTCLPINSFSYSCKCLQGFVGVLCDEAEDQPNPCQSIKCKHGKCRLSGLGKAYCECN
SGYTGDSCDKEISCRGERIRDYYQRQQGYAACQTTEKVSRLECKGGCSNGQCCGPLRSKR
RKYAFECTDGSSFVDEVEKVIKCGCTKCPS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaagcgtcgtgaagaaaaagatgtgctacgtaggtttctggaaactgtccatc
tctttgggtttggtactggtcacactaagcgaggtggcaccacagccttgtccatctcaa
tgctcttgttcgggcaccaccgtggactgccatgggctcaccctgcggagcgtgccacgg
aacatcccaagaaacacagagcgtctagacctgaatgccaataatatcactagaatctcc
aaaacagactttgctggattaagacacctccggatcttgcagcttatggagaacaagatt
accaccattgagaggggagcattccaagacctgaaagaactggaaagactgcgccttaac
cgaaacaatctgcaggtgttccctgaacttcttttcctggggactccaaaactctacaga
cttgacctcagtgagaaccagatccaagccatcccgagaaaggccttccgtggtgctgta
gatattaaaaatctgcagctggattataaccagatcagctgtattgaagatggggcattc
agagcactgcgcgacctggaagtactcactctcaacaataacaacattactcgactttcg
gtggcaagctttaaccacatgcctaaactcaggacctttcgactccattcaaacaacttg
tattgcgattgtcacctcgcttggttatctgactggctgcgtcagaggccccgagttggt
ctctacactcagtgtatgggacccattcacctgaggggacataatgttgctgaggttcag
aagcgagagttcgtctgcactggtcagcagtcatttatggtccattcttgtagcgtctta
cattgccctgctgcttgtacatgcagcaacaatattgtagactgtcgtggaaaagggttg
actgagatccccactaacctgccagagacaataacagaaatgagactggagcaaaattcg
atcaaggtcattcctccaggagcattctcaccatacaagaagttgagaagaattgattta
agcaacaaccagatttcggaaatagccgcagatgctttccaaggcctgcgttcactcaac
tcccttgttctctatggaaataaaatcacagagctccccaaaggcgtatttgaaggactg
ttctcattacagttactactactcaatgccaacaagattaattgtttacgtgtagactcc
ttccaagatctgcacaacctgaaccttctatctctgtatgacaacaaactccaaaccatc
gccaaaggcacattctccccactccgtgcgatccagacgctgcatttggctcagaacccg
tttatctgtgactgccatctgaagtggctggcggattatctccatacaaaccctattgag
accagtggtgcccgctgcaccagcccccgccgactggcaaacaaaaggattgggcagatc
aaaagcaagaaattccgctgctcaggcacagaagactaccgatccaagctcagtggagac
tgctttgcagacttggcctgcccagaaaaatgtcgctgcgaaggaaccactgtggactgt
tccaaccaaaaactcacaaaaatccccgaccatattccccagtacacagctgagctgcgc
ctcaacaacaatgaattcacagttttggaggcaactggcatcttcaagaaacttccccag
cttaggaaaataaatctgagcaacaacaagataacagatatagaagaaggggctttcgaa
ggtgctaatggcgtgaatgagctattgctaactagtaaccgcatggaaaatgttcgccat
aagatgttcaagggcctggagggactgaaaaccctgatgctcagaagcaatcgcattagc
tgtgtgaataatgacagcttcacaggactgagctcagttcgcctcctctccctctatgac
aatcaaattactacagtggctccaggtgcatttgacgcgctgcattctctctctacgctg
aaccttttagcaaatccattcaattgcaactgccacctggcttggttgggtgactggctt
aggaagaaacgcattgtcacaggaaaccctcgatgtcaaaagccctactttcttaaagaa
attccgatccaggacgtggctatacaagattttacttgtgatgatggaaatgaagacaat
agctgttcgccgctgtctcgctgccctgccgagtgcacatgtttagatactgtcgttcgg
tgtagtaacaagggactgaagtctttacctaaaggcatccctaaggaggtcacagaatta
tatttggatggaaacatgtttccacttgttccaaaggaactttctaacttcaagcacttg
acacttatcgacctgagcaacaaccgaatcagcactctttctaaccacagcttcagcaac
atgactcagctcttaaccttgattcttagttataatcgtctaaggtgcattccacttcgg
gcctttgatgggctgaagtctctgagacttttatccttgcacggcaatgacgtctctgct
atacctgaaggagtattcagtgatctttctgccctgtcacatctagctattggggcgaat
cctctgtattgtgactgcaatatgcagtggctttccgactgggtgaagtcagaatacaaa
gaacctgggattgcaaggtgctctggtcctggagaaatggcggataagctcctcctcacc
accccctccaaaaagttcacctgcaatgggcctgttgatgttaacattcttgctaaatgt
aacccctgcttatcaaatccttgcaaaaacgatggcacctgtaacaatgatcctgtagaa
ttctaccgatgcacatgcccctatggctttaaggggcaagactgtgatgtaccaatccat
gcttgcataagtaacccatgtcataatggtggtacctgccatttgaaggaaggagacaaa
gaaggcttctggtgtgcttgtgccgatggatttgaaggtgaaaactgcgaggtcaacatt
gacgactgtgaagataatgactgcgagaataattctacttgtgtcgacggcattaacaat
tacacgtgccattgcccactggaatacacaggtgaactttgtgaagaaaaactggacttc
tgctcccaagatgtcaatccatgtcaacatgactcaaaatgcatcctgatgttgaaagga
tacaaatgtgactgtacacctggatacattggggaacactgcaatatcgactacgatgat
tgtcaggagaataagtgcagaaacggagcccgttgtgttgatgcagtgaatggttatact
tgtatatgcacagaaggatacagtggcttgttctgtgaatcagcgccaccgatggtgtta
cctcgcacaagtccttgtgacaacttcgaatgtcaaaatggagcccaatgcattgtgaaa
gggaatgaccctttgtgccagtgcttgcccggctatcaaggaaacaaatgtgaaaaacta
gtcagcgtaaattttgtgaacaaagactcgtttctccaaattccttcaacaaagatccgc
actcaggccaacatcactctgcaggttgctactgatgaagatagtgggattgtgctcttt
aagggtgacagggatcaggtagcagtggaactgtatcgtgggagagtgagagttagttat
gacactggaagcaacccagcatctgccatttacagcgttgagacaataaatgatggaaat
ttccatgtggtggagttggttaacctggatcaaacactgtcactgatcattgacggagga
accccaaaatccattaccaatttaccaaaacagtcgttattgagtgttgactccaccctt
tacataggaggtatgcccctgaaaaacaacattgcaggtcttcgacagtcttcaagtaaa
aatggcaccaacttccaaggttgtattaggaacctatacatcaataatgaactacaggac
ttcagaaagctaaatctacaagctggagttcttcccggctgtgaaccgtgccataaaaaa
gtctgcgtccatggcacatgtctggctacaagccaagctggcttcacttgcgaatgtgaa
ggaggatggacaggacaactctgtgatatccagtccaatgatccctgtctgggaaacaag
tgtgtccatggcacatgcctcccgattaattcattctcttatagttgtaagtgccttcaa
ggctttgtgggagttctctgtgatgaagctgaagatcagcccaatccctgccaatccatt
aaatgtaaacatggaaagtgcaggctttcggggttaggaaaagcatattgtgaatgcaac
agtggttatacaggagacagctgtgataaagaaatctcttgccgaggggaacggatcaga
gattactaccaaaggcagcaaggttatgctgcttgccagacgaccgagaaggtatccaga
ttagaatgcaaaggagggtgctcaaatggtcagtgctgtggaccactgaggagcaaaagg
cggaaatatgcttttgaatgcacagatggttcatcctttgtggacgaagttgagaaagtc
ataaagtgcggttgtacaaagtgcccctcctaa
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integrated database retrieval system
