Xenopus laevis (African clawed frog): 108698149
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Entry
108698149 CDS
T01010
Symbol
abca2.L
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla02010
ABC transporters
xla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108698149 (abca2.L)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108698149 (abca2.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
108698149 (abca2.L)
Transporters [BR:
xla02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108698149 (abca2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
DUF6847
Motif
Other DBs
NCBI-GeneID:
108698149
NCBI-ProteinID:
XP_018084908
Xenbase:
XB-GENE-6487180
UniProt:
A0A8J0TFT5
LinkDB
All DBs
Position
8L:complement(2235954..2273081)
Genome browser
AA seq
2538 aa
AA seq
DB search
MSERPCLPVQPPNSHNPPNPPSRLHLNPLTRLRPEIVVGGEALAMGFLHQLHLLLWKNIT
LKRRSPWVLTFEIFIPLVLFFILLGLRQKKPTIPVKEVSYYTAAPLTSAGILPVMQSLCP
DGQRDEYGFLQYTNSTVTQLLERLTEVVENSNLFDTDRPGLGEELESLKHHLESLSSDPS
SLENHFHSQSGFTLDSVVKDKDTFRGFLSRNLSLPSDVVDLLAGSNINLQEVYHLFFSSP
YLLPKEPPDRSHWDAATSVGEHLLNLPGLLPGKWKSSLKKGLIHKALKDPLRSGHKLALL
RLLTLALGLSIPNLSAESYDPQEVVKDLEEIIFTPFALESLTCEESSDELGSILKTSERK
RPLLTLYHNLICNGSQSLRREHFKELADELKEQVDVQKTVSRLRLDEVNATVTQRRLQSL
LEDLLEVEKILKDVDILSALAKLLPKGACASKSVLPTVNSTSWGINSTSGFNFSSEAEEE
AKKQEDEEDDENPKSQFSAFVQLWAGLQPILCGINRTIEKEAFKQGNMSSLGFTSKEQRN
LGLLVHLMTSNPKILYSPVGTEVDKVIRKANETFAFVGNVTRYAWMWLNISSEIRGLLEE
GILQRRIEWLQQFTSDLQKHPELLNGSDSELLRKVLSSNFTMPNASTLLQQLDTIDNAAC
GWTRFMSKVSVDIFKGFPNEDSIVNYTLNQAYQDNVTVFASVIFQTQKDGSLPPHVMYKI
RQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMDRAIINTIVGHDVVEPGNY
VQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEHRLKEVMKMMGLNN
AVHWVAWFITGFVQLSISVTALTGILKYGQVLMHSNVFIIWLFLSIYAVATIMFCFLVSV
LYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMSTTAFGLGSKYF
ALYEVAGVGIQWRTFSQSPVEGDDFNLMLSMMMLIIDTVVYGILTWYIEAVHPGMYGLPR
PWYFPFQRSYWLGSGRIETWEWTWPWSRPPRLSIMEEDQACAMESRRLDETRGIEEEPSH
LPLVVCIDKLTKIYKTDKKLALNKLSLNLHENQVVSFLGHNGAGKTTTMSILTGLFPPTS
GSATIYGHDIRTEMNEIRKSLGMCPQHNVLFDKLTVEEHLWLYSRLKGMAEEEIRKEMDK
MIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSKAIILDEPTAGVDPYARRAIWDLI
LKYKQGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTYGDGYKLTAVKSQN
GPDTGPSCISLCSEPRVSQFIKKYVASCLLVSDTNTELSYILPSESVRKGCFERLFQHLE
QNLCDLELTSFGLMDTTLEEVFLKVSEEDQSLENSDADIKESKKDTLRPLIQPDGGTCAP
RTDVLEKPEVELNNFASGAKTSQSPGSLRSGSSSSVGSVRGDEGGAYAEFYGDYSPLFDN
PQDAENLSLHDPEIEELVLDGQGSYKVEGSWLKLRQFHGLIVKRFHCAKRNTKALFSQIL
LPAFFVCVAMTVALSVPEIGDLPPLILSPSQYHNYTQPKGNFVPYANEEQPEYRIKLSPD
AGPQQLVNTFHLPSGIGATCVLKTAFNSTLDQLVQSLNMNSSESKMLAAQYFDAMCVDSF
TQGLPLSNFVPPPPSPAPSDYPPDEDLSHLWNATTYPPEPVQAETITSTPSLPRRIHEPI
RCTCSMQGTGFSCPSGVGGHPHQMKVVTGDIMVDISGRNVSEYLLYTSDRFRLHRYGALT
FGNVQKAVPASFGVKAPPVLRKIAVRHTAQAYFNNKGYHSMPTYLNALNNALLRANLPKS
KGNPAAYGITVTNHPMNKTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVAEKS
TKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPATCCIIILFVFDLPAYTSPTNFPAVLLL
FLLYGWSITPIMYPASFWFEVPSTAYVFLIVINLFIGITATVATFLLQLFEHDKDLKLVN
SYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKMKSPFEWDIVTRGLVAMTIE
GFVGFFITIMCQYNFFRKPQRLPISNKPIEDDDIDVANERQRVLRGGADNDMLKIENLTK
VYKSRKMGRILSVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFINGHS
ILKELLQVQQTIGYCPQFDALFDELTAQEHLELYTRLRGIPWKDEERVVKWALEKLELSK
YSDKPAGTYSGGNKRKLSTAIALIGYPSFIFLDEPTTGMDPKARRFLWNLILDIIKTGRS
VVLTSHSMEECEALCTRLAIMVNGRLKCLGSIQHLKNRFGDGYMITVRTKSSINVKEVVR
FFNRNFPEAVLKERHHTKVQYQLKSEQVSLAQVFSKMEQVLDVLGIEDYSVSQTTLDNVF
VNFAKKQSDNMEQQEATPNCAAATPLDRVLSLLRPRTTPTELRALVVEEQEDLDTDDEGL
ISFEEERAQLSFNTDTLC
NT seq
7617 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaggccatgtctccctgtgcagccccccaattcccacaatccccccaatccc
ccctctcgcctgcatcttaaccctttaacgagactcaggccggagattgttgtcggggga
gaagccttggccatgggattcctacaccaactgcacctcctgctatggaagaacatcacc
ctgaagcggaggagcccgtgggtgctgacattcgaaatttttatccctttggtgctgttc
tttatcctactcggcttgcggcagaagaaaccaaccatcccagtgaaggaagtctcatac
tacacggctgcccccctcacctcagctggaatattaccggtcatgcagtctctgtgccca
gatggacaacgggatgagtacgggttcctccaatacaccaactccacagtgacgcagctg
ctggagagactaacggaggtggtggagaacagtaacttgtttgatacagaccgacccggt
ttgggagaagaactggaatccctgaaacatcacttggaatcactgagcagcgaccccagc
tccctggagaaccatttccacagccagtcagggtttacattggactcggtggtgaaggat
aaagatacatttcggggtttcctaagccgcaatctctccctgcccagtgatgtcgtcgat
ttactggccggatccaacataaatctgcaagaggtctaccatctgtttttcagttctcca
tatctcttgcctaaagagccaccggacaggagtcactgggatgctgcaacatcggttgga
gaacatctcctcaacttacctgggctacttccagggaaatggaagtcatcgttgaagaag
gggctgattcacaaagcactaaaagaccccttaagatcagggcacaagttggcactgctt
agacttctgactctggcactggggctgtccattcccaacctgtcagctgaaagctatgac
ccccaagaggtggtgaaggacctggaggagatcatcttcaccccttttgccttggaatct
ctgacctgtgaggagagctcggatgaactgggaagtatcctaaagacttcagagcgcaag
cgccccctgttgactctctaccataatctcatttgcaacggtagccaatcattgcgccgg
gagcacttcaaggagctggcggatgagctgaaggagcaggtcgatgtacaaaaaacagtc
agcaggctgcggttggacgaggtgaatgctacagtgacccaacgccgccttcaatccctt
cttgaagacctgctggaagtggagaagatcctaaaggatgtggacattctgtcggctctg
gccaagcttcttcctaagggggcctgtgctagcaagtctgttttgcccacagtcaactca
accagctgggggatcaactccaccagtgggtttaacttcagctccgaagctgaagaagaa
gctaagaagcaagaggatgaggaagatgatgagaacccaaagagtcaattctctgccttc
gtgcagctttgggcaggactgcagcccatcttgtgcggtatcaacaggactatagaaaag
gaggctttcaaacaaggtaacatgagttccttggggttcacaagcaaagaacaaaggaat
ctggggctcctcgttcacctgatgaccagtaaccccaaaatcctctactcccctgtgggc
accgaggttgataaagtcatccggaaggcgaatgagacctttgcatttgtgggaaacgtg
acccgatacgcttggatgtggctgaacatttcgtcagagatccgtggcctgctggaagaa
gggatcttacaaagacgcatcgagtggctccaacagttcaccagtgatcttcagaaacac
ccagagctgcttaatggttcagacagcgaacttctacgtaaggtccttagttccaacttc
accatgccaaacgccagcaccctgctacagcaactcgacaccatcgacaacgcggcctgt
ggctggacccgcttcatgtccaaggtgagtgtggacatctttaagggattccccaatgag
gacagtattgtcaactataccctaaaccaggcctaccaggataatgtcaccgtgtttgca
agtgtgatcttccagacacagaaggacggctcactcccacctcatgtcatgtacaagata
cggcaaaactccagcttcacagaaaagactaatgaaatccgtagagcctactggaggcca
ggccccaacactggaggacgcttctatttcttgtatggcttcgtctggatacaagacatg
atggaccgagcaatcatcaatactattgtgggacatgacgtggtggaacccgggaattat
gtacagatgttcccatatccttgttacacacgtgatgattttctttttgtaatcgaacac
atgatgcccctgtgcatggtcatctcttgggtctattctgtagccatgatgatacaacat
attgtggcagaaaaggagcatcgtctgaaggaggtgatgaagatgatgggcctgaataac
gcagtacactgggtagcctggtttattacaggctttgtacaactctccatctcagtcact
gctctgactggcatcctgaagtacggccaggtcctcatgcacagcaacgtcttcatcatt
tggctctttctttccatctacgcagtggccaccataatgttctgtttcttggtctccgta
ttgtactcgaaggccaaactggcatcggcctgcggagggatcatctactttctgagttac
gtgccctacatgtatgtggcgatccgcgaagaagtggcccatgacaagatcacggccttc
gagaaatgcatcgcttctctcatgtctacaacagcctttggtctcggctccaagtacttt
gccctatatgaagtggctggtgttgggatccagtggcgaacctttagccagtcaccagtg
gaaggagatgattttaacttgatgctttcaatgatgatgctgataattgacactgtggtg
tatggcatcctcacctggtacattgaggcagttcatccaggtatgtatggcctaccccgc
ccgtggtacttccctttccagaggtcctattggctgggaagtggtcgaatagaaacttgg
gagtggacctggccttggtcccgcccacctcgcttgagcatcatggaagaggatcaagcc
tgtgcgatggagagtcgtcgcttggatgagactcgggggatagaggaagagcccagtcat
ctgccactggtagtgtgtattgacaaactcaccaagatctacaagactgacaagaagttg
gcacttaacaagttaagcctgaaccttcatgagaaccaggtggtttctttcctggggcac
aatggagcgggcaagaccactaccatgtcaatcctaacgggtctgtttcccccaacatct
ggctcagccactatttatggtcatgacatccgtacggaaatgaatgagatccggaagagc
ctgggtatgtgccctcagcacaacgttctgtttgataagctgacggtggaggagcatctc
tggttgtactcgcgactcaaggggatggcggaagaagagatacgcaaggagatggataag
atgattgaagacctggagctctccaacaagcgccactccttggtgcagaccctctccggt
ggcatgaaacggaagctgtctgtggccattgcttttgtcggcggctcaaaggccattatt
ttggatgagccgacggccggtgtggatccctatgcaaggagagccatctgggacctcatc
ctaaaatacaaacaaggtcgtacaatcctgctctctacacatcacatggacgaggctgac
cttctgggagaccgaattgccattatttcccatgggaagctgaaatgctgtggatctcca
ctcttcctgaagagtacttatggagatggctacaagctgactgctgtcaagagccagaat
ggcccagacactggaccttcctgtatcagtctctgctcagagcctcgagtatctcagttc
ataaagaagtatgtggcctcctgcctgctggtctctgacacaaacactgagctctcatac
attctccccagtgagtccgtcaggaagggatgctttgagcgcctctttcagcacttggag
cagaatctatgtgacctggaactgaccagttttggcctgatggacacaaccctagaggaa
gtgtttctcaaggtctctgaagaggatcagtctctagaaaacagtgatgcagatatcaag
gaatcaaagaaagacaccctgagacccctcatacagcctgatgggggaacatgcgcccca
cggacagatgttttagaaaagccagaagtggaactcaacaactttgcatctggagccaaa
accagccaatcccctggatctctacgctctggctcgtcttcttctgttggctcagtgcgt
ggggatgaaggtggggcctatgctgagttctatggggactactcccccttattcgataac
ccgcaggatgcagaaaacctcagcttacacgatcctgagatagaagagctagtcttggat
gggcaaggaagctacaaagtggaaggatcttggcttaagctgcggcagtttcatgggctc
attgtcaagcggttccactgcgccaagcgcaacaccaaagccctgttctcccaaattctc
cttccggcattctttgtctgtgtcgccatgactgtggcattgtctgtccctgagataggt
gaccttccgccactgatcctgtcgccctctcagtatcacaattatactcagcctaaaggg
aactttgtgccctatgccaacgaggagcaaccagagtataggatcaagttgtccccagat
gccggccctcagcagcttgttaatacttttcacctgccatcaggcattggggccacgtgt
gtgctgaaaactgcatttaatagcactctggaccagcttgtccagtcgctcaacatgaac
agcagtgagtcgaagatgttggctgctcagtactttgatgccatgtgtgtcgactcgttc
acccaagggctacccctgtctaactttgtgccgccaccaccttcacccgctccctcggat
tatcctcctgatgaggacctctctcacctttggaatgccaccacctacccacctgagcct
gtgcaagcagagaccataacctcaaccccttcccttcctcgtcggatccatgagccaatc
agatgcacttgttctatgcaaggcactggattctcctgtcctagtggcgttgggggtcat
ccgcatcagatgaaggtggtgacaggagatatcatggtggatattagtgggagaaatgtc
tctgaatatctcctgtacacttcggaccgattccggctgcataggtatggagccctgaca
tttggcaatgtgcagaaagccgtcccagcatcctttggtgtaaaggctccacccgtgttg
aggaagatcgcggttaggcacacagcccaggcttatttcaacaacaaaggataccacagc
atgccaacgtaccttaatgccttaaacaatgccctcctaagagccaacctgcccaaaagc
aaggggaaccctgcagcctatggaatcactgtgaccaaccatccaatgaacaagacaagt
gctagtctctccctcgattatctgttacaaggcactgacgtagtcattgccatttttatc
atcgttgccatgtccttcgtcccggcgagttttgtggtcttccttgtggctgagaaatcc
acgaaagccaaacacttacagtttgtcagcggctgtaaccctgtcatctactggttggcc
aactatgtttgggatatgttgaattacctagttcctgccacttgttgcatcatcatcctc
tttgtatttgacctccctgcctacacctcgccgaccaactttccagccgtcctgttgctc
tttcttctttatggatggtctatcactcctataatgtaccctgcctccttctggtttgag
gttcccagcacagcctacgtcttcctcatcgttattaacctcttcattggcatcactgcc
actgtggcgaccttcttgctgcagctctttgaacatgacaaggacctgaaattggtcaac
agttacctgaaaagttgttttctcatcttccccaactataacctgggacacgggctgatg
gaaatggcctataatgagtacattaacgagtactatgccaagattggacaatttgacaaa
atgaaatccccgttcgagtgggatatcgtcactcgaggcctggttgccatgacaatagaa
ggattcgtgggattctttatcactataatgtgtcagtacaatttcttcagaaaaccacaa
cggctgcccatttccaacaagccaatagaagacgacgacatagatgtggccaatgagagg
cagcgggtattgaggggaggagcagataatgatatgctgaagattgagaatctaaccaag
gtgtacaagtcaaggaaaatgggccggatcctgtcagttgatcgcctgtgtgttggcgtc
agaccaggagaatgttttgggctgttgggggtgaatggtgctggcaagaccaccacattc
aagatgctaacaggagatgagagcacaacaggtggagaggcttttatcaatggacacagt
atcctgaaggagctcctgcaagtccagcagaccattggctactgcccacagtttgatgcc
ctgtttgatgagctgactgcacaagaacacctggagttatacacccgtcttaggggcatt
ccctggaaggatgaggagagggtggtgaaatgggcattggagaaactggaactaagtaaa
tactcagacaagccggctggcacctacagtggagggaacaagaggaagttgtccactgcc
atcgcacttattggttacccgtccttcatatttctggatgaacccaccactggcatggac
cccaaagctcgccgtttcctctggaatcttattcttgacatcatcaagactggacgatcc
gtagtgctgacatcacacagcatggaggaatgtgaagctctatgcacccgactcgccatt
atggtaaatgggcgcctcaagtgtcttggcagcatccagcacttgaagaacaggtttggg
gacggctacatgataaccgtgaggaccaaatccagcataaatgttaaggaggtcgtacgg
ttcttcaacaggaactttccggaagccgttctcaaggagcggcaccacaccaaggtacaa
taccagctgaagtccgaacaggtgtcgttggcccaggtgttcagtaagatggagcaggtt
ctggatgtccttggaattgaagattattctgtcagccagaccaccctggataacgtattt
gtaaactttgcaaaaaagcagagtgataacatggagcagcaagaggccaccccaaactgt
gcagcagccacgcctctggacagggtgctgagccttctcaggccacggacaacacccact
gagctccgggctttggtggtagaggagcaggaggatctggacacagacgatgaagggctg
attagctttgaagaggagagggcccagttgtcgttcaatacagacacgctctgctag
DBGET
integrated database retrieval system
