Xenopus laevis (African clawed frog): 108698240
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Entry
108698240 CDS
T01010
Symbol
gapvd1.L
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108698240 (gapvd1.L)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108698240 (gapvd1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5996
AceK_regulatory
Motif
Other DBs
NCBI-GeneID:
108698240
NCBI-ProteinID:
XP_018085063
Xenbase:
XB-GENE-17338330
UniProt:
A0A8J0THX6
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Position
8L:18480630..18537048
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AA seq
1500 aa
AA seq
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MVKPDIHTLARHLKQERLYVNSEKQLIQRLNADVLKTAERLYRTSWIAKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGEFLNHLRENPRLIASCLVAAEKL
NQENAQSVIHTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKENDNPRRLLRKGTCAFSI
IFKLFSEGLFSPKLFLTATLHEPIMQLLVEDEDHLETDPAKLIDRFSPAQQEKLFGEKGS
EAFRLRVQEMVASNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMFKTLSCVEGLEVS
EVRSMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLALSGFEEGD
SRSKSNLSKFDKSCVAAFLDVVISGHAVETPPLSSVNLLEGLSRTVVYMTYTQLMSLLGF
LRTVISSDQLREEDRMALENLLATVPQTKPGKSNNDTTPYSTPQLSPATTPACKKNRLPI
GQQLAAMTVWETSASNLTAHINLVTPFVTRSRSKTSLMEAENEGSPQEVDPDQPEEVLVI
SLGTGPQLTPGMMSENEVLNMQLVDGGQADVPVDESKLHGKPDKTLRFSLCSDNLEGISE
GECLGLRIVDIPEEENPCSTGPSNRSNSVSSLDLEGESVSELGGGPSGSNGVEALQLLEH
EQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIA
GAAAENMLGSLLCLPGSGSLLLDPCTGSTISETTSEAWSIEVLPSDSEAPDLKQEERLQE
LESCSGLGSTSDDTEVREVSSRPSTPGLSVVSGVAFSGISATSEDIPNKIEDLRSECSSD
FGGKDSVTSPEVEESVHGPHHITTPSTQTESLLAMFDPLAPASNEVVRPKVHYARPSHPP
PDPPLLEGASGGNEARLPMFGFVPTDSEAYRQRHSCPERLVRSRSSDIASSIRRPMSDPG
WVRRGMTEDRELPTGTAMNALINLPQSSSSSPSKDSSRGEPEEKKDSDDERSDRNRPWWK
KRFVSAIPKAPIPFRKKEKQEKEREDLVQDRFSIADDATSQLGPHSQAAEDILAKYRNAI
KRTIPNEGSSVPYEGADPVGDGESLHGSARDEALQNMASDDLLDSASQVAHPQESAFSYR
DAKKKLRLALCSADSVAFPMLSHSTRNGLPDHTDPEENEIVCFLKVQLAEAINLQDKNLM
AQIQETMRCVSRFDSRSCSKILASIAEDYRKRASYIAYLTRCRQGLQSTQAHLERLLQRV
LRDKEVSTRYFTTVCVRLLLESKEKETHEFIKDFQKLTAADDKTAQVEEFLQSLYGAMAQ
DVIWQNASEEQLQDAQIAIERSIMNRIFKLAFNPNQDADILRDQVLHEHIKRLSKVVTAN
HRALLIPEVYLREAPWPSAQTEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEYSVPG
ADDFVPVLVFVLIKANPPCLLSTVQYISNFYSNRLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagatatccatactcttgctcgccatctgaagcaagagcggctctatgtc
aactcagagaagcagctcatccagaggctgaatgctgatgtgctgaagacagcagagagg
ctctaccgaacatcatggatagccaagcagcaaaggattaacctggacagactcattctc
acaagtgctgaagcatccccagctgagtgttgccaacatgcaaaggtcctagaggatact
cagtttgtggatggttacaagcagctgggctttcaggagactgcatatggggagtttctc
aatcacctgcgtgagaatccgcgcctcattgcatcttgccttgtggcagcagaaaaactc
aaccaggagaatgcccagagtgtcatacacactgtcttcacctctctgtatggcaactgt
ataatgcaggaggatgagagctacttgttacaggttctgcgttacttaattgagtttgaa
ctgaaggagaatgataacccacgaaggctgcttaggaaaggcacatgtgcattcagcatt
atcttcaaactcttctctgaaggccttttctcccccaagctctttctaacagcaacccta
cacgagccgatcatgcagttgctggtggaggatgaggaccatctggaaaccgaccctgca
aaactgatcgataggttttctccagcccagcaggaaaagttatttggggagaaaggcagt
gaagcttttcgcctaagggtgcaggaaatggtggcatcaaatgaagctaagcttgtgacg
cttgtcaataaattcataggatacttgaagcagaacacatactgcttcccgcacagtcta
agatggatcgtctcacaaatgttcaaaactttgtcctgtgtagaggggctggaggttagc
gaggtgagatctatgtgcactgacctgctactgacttgtttcatttgcccagcaattgtg
aacccggaacagtacgggatcatttcagacgctcccatcaatgaagtagcaaggttcaac
ctaatgcaggtgggccgcctcttacagcaactggcactaagtggatttgaagagggagat
tcacggagcaagagtaacctcagtaaatttgacaaaagctgtgtggctgctttcctggat
gtggttatcagtggtcatgcagttgaaacacctcccctttcatctgtgaatctcttggaa
ggattaagtcgaacagttgtatacatgacgtacacccaacttatgagtctgttggggttc
ttgcgtactgtcatctccagtgaccaattgcgggaagaggacaggatggcattggaaaac
ctcctagctacggtaccccaaaccaagccagggaagagtaacaatgatacaacaccttac
agcactcctcaactctccccagccaccacaccagcctgcaagaagaataggctacctatt
ggtcagcagctggcagccatgacagtgtgggaaacctctgcctcgaatctcaccgctcac
attaacctggtgaccccgtttgttactcgcagtagaagcaaaacaagcctgatggaggca
gagaatgaggggtcgccacaggaagtcgaccccgatcagcctgaagaggtcctggtcatt
tctctagggactggtcctcagctcacaccaggaatgatgtctgaaaacgaggttttgaac
atgcagctcgtagatgggggtcaggcggacgtgcctgtagatgaatctaaacttcatggg
aagccagacaagaccctgcgtttctccctctgcagtgacaacctagaaggcatttcagaa
ggtgaatgtttgggtttaagaatagttgacattccagaagaggaaaatccgtgttcaaca
ggtccttcaaatcgttccaattctgtttcgtctctggatcttgaaggagagtctgtatct
gagctaggagggggaccatctggaagcaatggagtagaggctttgcagttactggaacat
gaacaagcaaccacacaggataatctagatgacaaactgcgcaaatttgaaatccgtgac
atgatgggattgacggatgacagagatatctctgagacagtcagtgagacatggagcaca
gatgtgcttggaagtgattttgaccccaacattgatgaagatcgactgcaagaaattgca
ggtgcagcagctgagaacatgctgggaagcctactgtgccttccaggctccggctcgtta
ctgctcgatccctgcactggatccactatatctgagactaccagtgaagcatggagtatt
gaggtgctccctagtgattctgaagcaccagatctgaagcaagaggagcggctgcaggaa
ctggagagctgttcaggtttggggagcacatccgatgatactgaagtcagagaggtcagc
tcccgacccagcactccaggactcagtgtggtttcaggtgttgctttttcaggtatcagt
gcaacctcagaggacatccctaacaagatagaggacctacgctctgagtgcagctctgat
tttggaggaaaggattctgttacaagtcctgaagtagaagagtctgttcatggacctcac
catataactacaccttcaacccagactgagtcattattggccatgtttgacccactggct
ccagcatctaatgaagtggttcggcctaaagtacactatgcgagaccctcacacccacct
cctgatccacctttactggaaggggcaagtggaggaaatgaagctcgtcttcctatgttc
ggctttgttcccacggactctgaagcttacaggcagaggcactcatgtcctgaaagactg
gtgcgcagccgcagctctgacatcgcttcttccatacgaaggccaatgagtgaccctggc
tgggtgcggcgggggatgactgaagatcgtgagctgccaacaggaactgcaatgaatgca
ttaattaatctccctcagtcttcatcctcttcgcccagcaaggactcttccaggggagag
ccagaagagaaaaaagacagtgatgatgagcgatcagataggaataggccttggtggaag
aagcggtttgtgtctgcaattcccaaagctcctatcccatttaggaagaaggaaaaacag
gagaaagaaagggaagacttggtacaagacaggttttcaatagcagatgatgctacttcc
cagctaggtccacattcccaggcagcagaagacatcctggctaagtacagaaatgctatc
aaaaggacaatccccaatgaaggttcctctgtgccctatgaaggagcagatcctgttgga
gatggagaaagccttcatgggtctgctcgtgatgaagctttgcagaacatggcctcagat
gatctgcttgattctgccagccaagtagcccaccctcaggagtctgcattttcctataga
gatgctaagaaaaagttacgcctggccctgtgctccgcagattctgtggcattccctatg
ttgtctcattcaacacggaatggcttgccagatcacacagacccagaagaaaatgagatt
gtgtgcttccttaaagtccaacttgcagaggccattaacctgcaggacaaaaacctgatg
gctcagattcaggaaactatgcgctgtgtgagccgatttgacagccgttcctgcagcaag
atcttggcctcaattgcagaagattacaggaagcgggcctcgtatattgcatatctaaca
agatgccgacagggactacagagcacccaggctcatcttgagcgcctcctgcaaagagtg
ctacgagataaggaggtctccacacgctacttcaccactgtctgtgtgcggcttctactg
gagagcaaggagaaggaaacccatgaatttataaaagattttcaaaagctaaccgcagct
gatgataaaacagcgcaagttgaagagttcttgcaatcactttacggggcaatggcacaa
gatgtgatctggcaaaatgccagcgaggagcagctgcaagatgcacagattgccattgag
cgaagcattatgaaccgcatctttaagctggccttcaatcccaatcaagatgcagacatt
ctgcgagatcaggtcctgcatgaacacatcaaaaggttgtccaaagtggtgactgccaat
cacagagcactgctgatacctgaggtgtatctgagggaggctccttggccatctgctcaa
actgaaatccgtaccatcagtgcatacaagacacccagggacaaagtacaatgcatattg
cgcatgtgctcaacaatcatgaaccttttaagcctggccaatgagtactctgtcccagga
gcagacgattttgttcctgtgctggtgtttgtccttattaaggctaatcccccctgcctg
ctgtcaacggtgcaatatatcagcaacttctattcaaatcgactcagcggtgaagagtcc
tactggtggatgcaattcacagctgccgttgagttcataaaaaccattgatgatcgcaag
taa
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integrated database retrieval system
