Xenopus laevis (African clawed frog): 108698360
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Entry
108698360 CDS
T01010
Symbol
cul4b.L
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03420
Nucleotide excision repair
xla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108698360 (cul4b.L)
09124 Replication and repair
03420 Nucleotide excision repair
108698360 (cul4b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108698360 (cul4b.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
108698360 (cul4b.L)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108698360 (cul4b.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
108698360 (cul4b.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108698360 (cul4b.L)
TCR (transcription coupled repair) factors
Cul4-CSA complex
108698360 (cul4b.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108698360 (cul4b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
ADH_zinc_N
Motif
Other DBs
NCBI-GeneID:
108698360
NCBI-ProteinID:
XP_041428639
Xenbase:
XB-GENE-17332246
UniProt:
A0A8J1LHU9
LinkDB
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Position
8L:complement(36885792..36925873)
Genome browser
AA seq
866 aa
AA seq
DB search
MRPARSGIMKDLIASPSGQSKQGLSSPNPPAQEVRTEGNSTSKRRRLNISSSDKDDLDPL
SPPRNSSSSSNHIQKKLRFEDTLDFLGLDVKMAEESPSSSSCSSSSAPQAVRSKNLLISP
VGVGHHANGLTKASPVSSFANSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKGAVEAI
QNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLK
KIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRTHIISDQKVQNKTI
DGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQE
LEVPEYLHHVSKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLNHLLDG
NRIQDLFLLYQLFSRVRGGVQVLLQHWIEYIKSFGSTIVINPEKDKTMVQELLDFKDKVD
HVIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRTGNKEATDEELEKML
DKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEG
MFKDMELSKDIMVHFKQYMQNQNLPGNIELTVNILTMGYWPTYVPMEVHLPPEIVKLQEI
FKTFYLGKHSGRKLQWQSTLGQCVLKAEFNEGRKELQVSLFQTLVLLMFNEGDEFIFEEI
KQATGIEDSELRRTLQSLACGRARVLIKNPKSKDVDDGDKFTFNDDFRHQLFRIRINQIQ
MKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLK
KRIESLIDRDYMERDKENPNQYNYVA
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccgcacggtcgggcattatgaaagacctcatcgctagtccttccggtcagtca
aaacaaggtttatcatcccccaaccccccggcgcaggaggtcaggactgagggaaacagc
acctccaaaagaagaaggttgaatatcagcagcagcgataaggacgatttggaccccctg
tcgccccccagaaactcctcttcctcctccaaccacatccaaaagaagctgcgatttgaa
gacactttggactttctaggactcgatgtgaaaatggctgaggagtcaccttcctcttct
tcctgctcttcctcctctgctccacaggcagtgaggagtaaaaacctgctcatctcccca
gtgggtgttgggcatcatgccaatgggctcacaaaagcctcacccgtgtccagctttgcc
aacagcaagcctggctcagccaagaaattagtcatcaagaactttaaagataaaccaaaa
ttgcctgaaaactacacagatgaaacctggcagaagcttaaaggcgctgtggaagccatc
caaaatagcacttcaattaaatacaacctggaagaactctaccaggctgtggaaaacctt
tgctcttacaaaatatctgcaaacctttacaagcagttgagacaaatctgtgaagaccac
atcaaagcacaaattcatcagttcagagaagattcattggacagtgttctttttctgaag
aaaatagataaatgttggcaagatcactgcagacaaatgatcatgattaggagtatcttt
ttatttctggatagaacgtatgttcttcaaaattcaatgctgccatctatttgggatatg
ggtctagagctgtttagaactcacataatcagcgatcagaaagttcagaacaagactatt
gatggcatcctcctgctgattgagagagaaaggaatggcgaggccattgacaggagttta
ttgagaagccttcttagcatgctttctgacttgcaaatttatcaggactcttttgaacag
agattcttggaagaaacaaatcgtttgtatgcagcagaaggacaaaggctcatgcaagaa
ctagaggtcccagagtaccttcatcatgtaagcaaacgcctagaagaggaagcggataga
gttataacatatttagatcaaagcacacaaaaaccattaattgccactgtagaaaaacag
ctcctaggtgaacatttaacagccacccttcagaaaggcttgaaccatcttcttgatgga
aatcgaattcaggaccttttcttgctttatcagttatttagtcgagtaaggggtggggtg
caagtccttttgcagcactggatcgagtacatcaagtcttttggcagtactattgtgatt
aatcctgagaaagataagacaatggtacaggagctgttggattttaaagataaagtggac
catgtaattgatgtctgcttcctaaagaacgagaagtttgtcaatgccatgaaagaagca
tttgaaactttcattaacaaacgaccaaataaacctgctgaattaattgcaaaacatgtt
gattctaaacttcgaactgggaacaaagaagccacagacgaagaacttgaaaagatgttg
gataaaattatgataatttttaggttcatttatggaaaggatgtctttgaggccttctat
aagaaagatttggcaaagaggcttttagttggtaaaagtgcatcagttgatgctgaaaaa
tctatgctttccaaattgaagcatgaatgcggagcagcatttaccagcaaacttgaagga
atgtttaaagatatggagctgtctaaagatataatggttcactttaagcagtatatgcag
aaccaaaatctccctggcaacattgagcttacagtaaatattctaacaatggggtactgg
ccaacttatgtgcctatggaagttcatctaccaccagagattgtgaaactacaggagatt
tttaagaccttttacctgggaaagcacagtggtagaaagctacaatggcaatcaactcta
gggcagtgtgttttaaaagcagagtttaacgagggcaggaaagaacttcaagtctccctg
ttccaaacactggtgttacttatgtttaacgagggtgatgaattcatctttgaagaaatt
aagcaagctactggcatagaggatagtgaattaaggagaacccttcagtccttagcctgt
ggcagagctagagtgcttatcaagaatcccaagagtaaggatgttgatgatggggacaaa
ttcacatttaatgatgatttcaggcaccagctgttcagaatacgaataaaccagatccag
atgaaggaaacggtggaagaacaagcaagcactacagaaagagttttccaggacagacag
taccaaatcgatgcagcaattgttcggattatgaagatgaggaagacccttagtcacaat
cttctggtgtcagaagtgtataaccagcttaaatttccagtcaagccagcagacctgaag
aagagaatagaatcattaatagatagggactacatggaaagagacaaagaaaatccaaat
caatacaattatgttgcataa
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