KEGG   Xenopus laevis (African clawed frog): 108698362
Entry
108698362         CDS       T01010                                 
Symbol
zc3h12b.L
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108698362 (zc3h12b.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     108698362 (zc3h12b.L)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 108698362
NCBI-ProteinID: XP_018085280
Xenbase: XB-GENE-17332764
UniProt: A0A1L8F772 A0A974H779
LinkDB
Position
8L:complement(37023337..37086409)
AA seq 849 aa
MTAWSMVKKLEMEKRPSKERAAAKEMEYSQDLGDCSGESDEWTSSESEAEQQIGRSGLRG
YGNTLFKEADISSKPHRQLCRSPCLDRPSFSQSSIQVPIDNQIKLAEAKSNLDREYQAKM
DFALKLGYCGEQIQAVLNKLGAEALINDILAELVRLGNKGESETQSSGSGSSGILVPRGP
CTKEIASPELSLEDEIVDNTENLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGH
KDITVFVPAWRKEQSRPDAPITEQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKL
AFDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFL
RKKPVIPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPLRSVADELRISAKLSAVKTMSEG
ALMKCGMVPSCLRGDGIIETKRIAPKRQSDPSIRSAAVEPEQRLSAARKSEANSVPSLVS
ALSVPILPPTKSHAVSALNTRSASSPSQFSHQKSSLEHMGSVHYPPILVTNSHGNSVSYT
EEYPKYESLGDHGYYSMISDFSNLSISSMHSSEYYQPEQERAGFSRNSSPCPESCVSHNS
SDSYSSYSDLYLGISDPGLEDNMKPSRQPQSRLQPFAHGYHEALTRVQSYGQEQPMQASR
KQSSSHLALHIQHPLVGARSSCPGDYPGQENMHPGANAQPGRALVMTRMDSISDSRLYES
NPMRQRRPPLCREQHASWDPLPCPTDSYGYHSYPLSSNLMQPCYEPVMVRSMPEKMEQLW
QSPYWPPMSGEPREQHIIPEHQYQTYKNLCNIFPPGIVLSVMEKNPHMTDAQQLAAIIVS
RLRSGHHHC
NT seq 2550 nt   +upstreamnt  +downstreamnt
atgacggcctggtccatggtcaagaaactggaaatggaaaagaggccctctaaagagagg
gcagctgcaaaagagatggagtactcacaggatctgggagactgcagtggggaatctgac
gaatggaccagctcggaaagtgaagcagagcaacaaatagggcggagtggactgagggga
tatggtaacaccttatttaaggaagcagatatctctagcaaaccccatcgtcagctgtgc
aggtctccttgtctggaccgtcctagtttctctcagagcagcattcaggtccctatagac
aaccaaataaaacttgcggaggcaaagagcaatcttgacagggaataccaagcaaagatg
gactttgccttaaagttgggctattgtggggaacagatacaagctgtccttaacaagctg
ggcgcagaagcacttattaatgacatcttggctgagctggtgaggctgggcaacaaggga
gagtcagagacacagagcagtggaagtgggagcagtggaatcctggtacccaggggaccc
tgtaccaaagagattgcaagtccagaactgtctttagaagatgaaatcgtagacaacact
gaaaatctaaggcctattgttattgatggaagcaatgtggccatgagccatgggaataaa
gaggtcttctcctgccgagggatacagctggctgtggagtggttcttggagaaaggccat
aaggatattactgtgtttgtgccagcatggaggaaagagcagtcccgccccgacgcacca
atcacagagcaggagattctacggaaactggagaaggagaagattttggtatttacacct
tcccgcagggtgcagggcaggagagtggtgtgttacgatgatcgattcatagttaagctt
gcctttgattctgatggaattattgtatccaacgacaactatcgcgacctccagaatgag
aaaccagagtggaagaaatttatagaagagcgcctccttatgtactcatttgtgaatgac
aagtttatgcctccagatgatcctttgggaaggcatggccccagtttggaaaatttcctg
cgaaaaaagccagttatccctgagcacaagaagcaaccctgtccttatggtaaaaaatgc
acatatgggcacaagtgtaaatattaccatcctgaacgtgtgaaccaacctctgcgctca
gtggcagatgagctaaggataagtgcaaaactgtcagcggtgaagactatgagtgaaggt
gctctgatgaaatgtggaatggtgccatcctgcttaaggggagatgggatcattgaaaca
aagcgtattgcccccaagaggcagtcagaccctagcatccgttctgcagccgtggaacca
gagcagaggctctcggcagctcgcaaatctgaagccaattctgtgccatccctggtgtct
gctctgagcgtcccaatccttccccctacaaagagccatgctgttagtgctttgaatacc
cgatcagctagcagcccatcacagttctcccaccagaagtcatctctggagcacatgggg
agtgttcattatcctcctatcctggtgaccaacagtcatggcaactcagtgagctataca
gaagagtacccgaaatatgagtctctaggagaccatggatattactccatgatcagtgat
ttttctaacctgagtattagcagcatgcatagctcagaatattaccagccagaacaggaa
cgagcaggtttttccaggaactcaagcccttgcccagaaagctgcgtgagtcacaacagc
agtgactcctactcctcttatagtgacctgtatctaggtatatctgaccctggccttgaa
gataacatgaagccttcaaggcaaccacaaagccgcctgcagccatttgctcatggttat
catgaagccttaaccagagttcagagctatgggcaagagcagccaatgcaagcttcacgg
aaacaatcctcttcccatttagcccttcatattcaacatccgctcgttggggcacgatcc
agctgcccaggagattacccaggacaggagaacatgcaccctggtgccaatgctcagcca
ggtagggcattggttatgacccgaatggatagcatatcagattctcgcctctatgagagc
aatcccatgaggcaaaggagacccccactgtgtcgggagcagcatgctagctgggacccc
ttaccatgtcccacagattcatatggctaccattcatacccactgagcagcaacctgatg
cagccctgctatgaaccagtcatggttaggagcatgcctgagaagatggagcagctctgg
caatccccctactggcccccaatgtcaggggaacctagagagcaacatatcattccagag
catcagtatcagacctacaagaacctttgcaacatctttccaccaggaattgtcctctct
gtgatggagaagaacccacatatgacagatgcccaacaacttgcagccatcattgtttca
cggttacggtcaggtcatcatcattgctag

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