Xenopus laevis (African clawed frog): 108698409
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Entry
108698409 CDS
T01010
Name
(RefSeq) cysteine protease ATG4A
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04136
Autophagy - other
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108698409
04136 Autophagy - other
108698409
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
108698409
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108698409
03029 Mitochondrial biogenesis [BR:
xla03029
]
108698409
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
108698409
Membrane trafficking [BR:
xla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
108698409
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108698409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
DUF5330
Motif
Other DBs
NCBI-GeneID:
108698409
NCBI-ProteinID:
XP_018085361
UniProt:
Q6GPU1
A0A974C6F6
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All DBs
Position
8L:complement(43660136..43686568)
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AA seq
397 aa
AA seq
DB search
MDSDPVSDYLKYENEPEYLDLEELPDSDEPVYILGKQYDTKTDKCDLQSDIVSRLWFTYR
KKFSPIGGTGPSSDTGWGCMLRCGQMMLAQALVCQHLGRDWRWEKHKNHPEEYQQILQCF
LDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVV
VEDIKTMCKYQPQSCSMAQAASHQSTWSRCRDTSGHCSGWRPLLLVVPLRLGINHINPVY
VDAFKACFKMPQSLGALGGKPNHAYYFIGFSGDEIIYLDPHTTQTFVDTEEAGTVQDQTY
HCQKGPNSMKVLNLDPSVALGFFCKDENDFNNWCEVIEKEILKHQSLRMFELTPKHPPHW
PPFIPPTKPEVTTTGAELIESTDKLFDVEEEFEILSV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggactccgaccctgtttcagattatttgaagtatgaaaatgaacccgaatacttggat
ctagaagaacttcctgactccgacgagccagtttatattctgggaaagcaatatgatacg
aaaacagataaatgtgatctccaatcagatattgtttcccgtttgtggtttacatacaga
aaaaaattctctcctattggaggaacgggcccttcttctgacacaggatggggatgcatg
ctcaggtgtggacagatgatgctggctcaggctttagtttgccagcacctaggaagagat
tggcggtgggagaaacacaaaaatcatccagaagagtatcagcaaatcctgcagtgtttt
ctggatagaaaggactgttgttattctattcatcaaatggcacagatgggcgtgggagaa
ggaaagtctatcggagaatggtttggaccaaacacagtggctcaggtcttaaagaaactt
gctttatttgatgagtggaattcacttgcagtctatgtttccatggataacactgttgta
gttgaagacatcaagacaatgtgtaagtaccagccgcaaagctgcagcatggcacaggct
gcctcccaccaaagcacttggagcagatgcagagatacttcaggacattgctcaggctgg
aggccattgctgcttgttgtgcctctccggcttgggataaaccacatcaatcctgtatat
gttgatgcttttaaggcatgctttaaaatgccccagtcattaggagctttaggaggaaaa
ccaaatcatgcctattattttataggcttttcaggagatgaaataatctacctggatcct
cataccacgcagacatttgtggacactgaagaagctggaacagtacaggaccagacttac
cactgccaaaaaggccctaacagtatgaaggttttgaatctggacccttcagtagcgttg
ggcttcttttgtaaagatgaaaatgatttcaacaactggtgtgaagtgatagaaaaggaa
attctaaaacatcagagtttacggatgtttgaattgacaccaaagcatcctcctcactgg
ccgccttttatacctccgacaaaaccagaagtgactactacaggagcagaactcattgag
tctactgataaactgtttgatgtcgaagaagagtttgagattctgagtgtctaa
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