Xenopus laevis (African clawed frog): 108698544
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Entry
108698544 CDS
T01010
Symbol
vps52.L
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108698544 (vps52.L)
Membrane trafficking [BR:
xla04131
]
Protein recycling
Others
EARP complex
108698544 (vps52.L)
Endosome - Golgi transport
Tethering complex
GARP complex
108698544 (vps52.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
COG6_N
DUF4795
DUF5740
Motif
Other DBs
NCBI-GeneID:
108698544
NCBI-ProteinID:
XP_018085609
Xenbase:
XB-GENE-6486704
UniProt:
A0A974H7V7
A0A1L8F8B3
LinkDB
All DBs
Position
8L:complement(63790396..63807055)
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AA seq
692 aa
AA seq
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MAEMEDMNLNLGDLDLTSDDLTLDTVSIHIQENLEDALVQEALKAGVDLRQYSKQVEMEL
QQIEHASIKDYIQESQNIASLHNQIIACDAILERMGHMLCSFQSDLSSISSEIHTLQEQS
LAMNIKLKNRQTVRSELSQLVDELIIPSAMISVILDVPVTDQQFVEQLHELNNKINYVKE
QSFKDTQACVDVQETLQKLKIKAVTKVREYILQKIYSFRKPMTNYQIPQNALLKYRFFYQ
FLLGNERSVAQEIQDEYVETMSKVYLSYFKSYTSRLMKLQYEEVAEKDDLMGIEDTAKKG
FFSKPALRSKNTVFTVGNRAAIISPTELEGPIIVPHTAQRGDIRYPFESLFRSQHYALLD
NSCREFLFLSEFFLVNGAAAQELFNSVMGRTLAMFLKHIDSYVSDCYDSIAIFLCIHIVL
RFKGIAQRRDIPAVDKYWDALLDMLWPRFQFILELNIQSIRNTDPQRLGTVDTRPHYITR
RYAEFSSAIVSINQTFPNEKTNTLLGQLQVEVENFVLRMAAEFSSRKEQLIFLINNYDMM
LGVLMERSSSDSKEAESFQQLLTARTQEFIEEILAPSFGGMIAFVKESESLIEKGQQERL
RSEEARVAQLVRGFSSTWKQAVENLSQDVMRSFTNFKNGTSIIQGALTQLIQYYHRFHKI
LSQPPLRNLPVCSELINLHHLMVELKKHKPNF
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatggaggacatgaatttaaaccttggggatttggacttgacttctgacgac
ctcactttggatactgttagcattcatattcaggagaatctagaagatgctctagtgcag
gaagctcttaaagcgggtgttgatctcagacagtattctaagcaagtggaaatggagtta
cagcagattgaacatgcttcaataaaagattatatacaggagagtcagaacatcgcctct
ctccacaaccaaatcatagcttgtgatgctatcctggagcgtatgggtcacatgttgtgc
agtttccagtcagaccttagttcaatcagctcagaaattcacacactgcaggaacagtct
ctcgctatgaacattaaacttaaaaatagacagactgtaaggagcgagcttagtcaactg
gtggatgaactgattatacccagtgcaatgatcagcgtgatccttgatgtcccagtgaca
gaccagcagtttgtggaacagttgcatgagctgaacaataagataaattatgtgaaggag
caatcattcaaagatacacaggcctgcgttgatgtgcaagaaactctacagaaactgaag
ataaaggctgtgactaaagtccgtgagtacatcctgcagaagatctactccttccgtaaa
ccaatgacaaattaccaaatcccccaaaatgctttgctgaaatacaggttcttctatcag
ttccttctgggaaatgagcgctctgtggctcaggagattcaggatgaatacgtagagacg
atgagcaaagtctatctgtcatatttcaaatcctatacgagccgactcatgaagttacag
tatgaagaagtggcagagaaggacgatctcatggggattgaagacacagcaaagaaaggc
tttttctcaaagccagctctccgtagcaagaacactgtgtttacagttggaaacagagct
gcaatcatcagtccaactgaattagaaggacccattattgttccacacacggcacagagg
ggcgatatccggtacccctttgagtctttatttcgcagccagcactatgcactgcttgat
aacagttgtcgagaattcctcttcttgtccgagttctttctggtgaatggcgcagcggct
caggagctgtttaactctgtaatggggcgaacccttgccatgttcctgaaacacattgat
tcctacgtatcagactgctatgacagcatcgctatcttcctctgtattcacattgtactg
agattcaaaggaattgctcagagaagagacatccctgctgtggacaagtactgggatgcc
ctgctggacatgctgtggcccaggtttcagttcatcctagaattaaacattcaaagtatt
cggaacacagatccacaaaggctgggcactgttgatacaaggccgcactatataacccgc
cgttatgcagagttttcctcagccatcgtcagcataaaccagacatttccaaatgagaag
acaaataccctgcttggtcagttacaggtagaggtggagaatttcgtccttagaatggca
gcagagttctcatcaagaaaagaacagttgattttcttgataaacaactatgatatgatg
ctcggtgtccttatggaacgatcatcctcagacagcaaagaagcggagagtttccaacag
ttgctgactgctcgaacacaggagtttattgaagagatacttgctccatcatttggagga
atgatcgcttttgtgaaggagtcagaatctctaattgagaagggacaacaggagcgactc
agaagtgaagaggcacgcgtcgctcagctagtgcgggggttctcatcaacatggaaacaa
gcagtggagaatctgagtcaggatgttatgaggtcatttaccaactttaagaatggaact
agcatcatacaaggtgccttaacacagctgatccagtattatcaccgatttcataagata
ctctcccagccgcctctcaggaatctgcctgtatgctcagaattaatcaacctgcatcac
ctgatggttgagctcaaaaaacataagcctaatttttga
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