Xenopus laevis (African clawed frog): 108698614
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Entry
108698614 CDS
T01010
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X2
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04517
IgSF CAM signaling
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108698614
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108698614
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108698614
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108698614
Intermediate filaments
Intermediate filament-binding proteins
108698614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CH_2
PH_17
Motif
Other DBs
NCBI-GeneID:
108698614
NCBI-ProteinID:
XP_018085720
UniProt:
A0A8J0TL22
LinkDB
All DBs
Position
8L:complement(69680275..69743063)
Genome browser
AA seq
2545 aa
AA seq
DB search
MANVSSDLDNMEVQTPPNNNNRWEQTERPWDEPAATGKLFECSRIKALADERDAVQKKTF
TKWINSHLSKVPLRVNDLYTDLRDGYIITKLLEVLSGEQLPKPTRGRMRIHYLENVDKAL
QFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDSRETRSAKDALL
LWCQMKTSGYPEVNIKNFTTSWRDGLAFSALIHRHRPDTIDFNKLTKSNATYNLQQAFNT
AEQQLGLTKLLDPEDVNMEHPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDKAIET
EKDIIRYEVLASELLEWIERTISIITNQKFANSLLGVQQQLQVFTTYCTTEKPCKFQEKG
NLEVLLFSIQSKMREEKCKLYVPSEGKNISDINKAWANLEKAEHEREVALRNELIRQEKL
ELLSQRFDQKASMREAWLTENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIQV
VADLAQELEAEGYYDICRISAQKDNILRQWNLLKDMLNSRRGRLEQNLSLQKIFQEMVYM
IDWMDEMQVPLSSKDFGKHLLEVEDLLQKHSLLEADIAAQTERVNSLNQAALKFTQMTDY
QPCDPQVICNRVEHVKSCLDSLRQLAEKRRGELEESRRLWCFLQEVEEAEGWICEKEHIL
SAPQSYGKDLSSVLRLLSKHKILVGELRGRHAMLQQTLQKGEQVLSKRRKGMSGLRQRME
QVRLKWENLEKACDNHQQKLQEASSFYQFSADTMELAGWLQDTYRLVSSDDFGHDEYSTQ
SLVKKHRAATVEIEKHKVAVLGLRQQLSELGAEYRDQVDVQITIVEVEQLYGEVVEVSAL
RNQWLQDALDVYKMFGEVNSCEVWIDEKEQWLMKMEIPQRLEEVEVVQHRFESLDQEMNS
LMGRVLDVNQIVQQLLESGHPSSSEVRACQDHLNSRWNRIVELVEQRKEQLSSVLRLQNY
FLECNEVKSQIREKRRAMETPQCGSGELGGVLSLQRKLSSMEAALLALEPKLVQLQQDAE
ILATSHPAEGMDVLVHFEEISGEWDALKRTLQGCEDSLTVANKLQQFIQDLDNFLTWLVK
TQTAVAAEELPSNLTEAERLLGLHGSLKEEISRYEEDYNKIQAVSDLLSLEEADLPYLSL
QQWLQKLEVGWSKLLQMWENRREVLVQAHIFHLFLRDVKQAEACLNTQESTLAHVELPNT
VEGVEAAIKKHKDFLTTMELNVQKVTIAVEAGESLIRLGNVFADHVQERINAIQKRSQRN
TALAQKWLQRLRDHLQLQHFIQNCNELDAWVHEKTLMARESSRDLSQKPHKKWLKHQAFM
AELSQNKGWLEKIEKEGQQLIHEKPELAGVVKKKLEEIRQCWVELESSTQSKAQQLFQAT
KADHVMQNYSELGKRLYHLEEQLQPMDSVPDVSSVNTQLKKLETMESQMEEWYNEVGELQ
AQISSLPLEVASQKAVEEKQNEVGTKMVRLIEPLKERRRILLASKELHQVTRDLEDEIFW
VQERLPLATSKEHGSNLQTVQQLIKKNQNLRREIQVHSPRVDDILERAGAIASIRSPEAE
GVRLGYESLQEMWNVLREETERRQQLLDITYQVQQYYFDVGEVETWLSEQELLMMNDEKG
KDEQSTLQLLKKHLMLEQTIENYEETIAQLSRQCRTLLDLGHPDSEQISKRQSQIDRLYV
SLKDLVDERKGRLEQQYWLFQLSREVDELEQWIAEKEVVAGSPELGQDYEHVTLLQEKFT
EFATEIGIIGQERISAVNQMVDELIDFGHSDAAIIAEWKDGVNEAWADLLELMETRSQML
AASHELHKFFNDCKEVLSQVEEKKQRLPEVKAQEAKLSAGSLQRILSSFEHDIQVLVTQV
RQLQENAAQLRTVYAGENAAAIVTSEQEVMRAWKELLTSCEDCRLQITSTSDRINFLNLV
RDLISWMESITCQIGTGEKPRDVSSVEVLMSYHQGVKSEIEARNKRISDCVELGKTLVLN
KRPSSDEIKQSLDRLMAKKKEMLEKWNKHWEWLQQMLEVHQFAQEAGVADAWLTAQEPIV
KSPELGNSVDEVEQLIRRHEAFRKTAAAWEERFSSLRRLTTLEKLKAEQNKQPATPLLGR
KVFPDTTDYSTRPSPLSHQTIYENSETKLDQKESLPIPDGGQQEIRRVRTDKGETRVGYA
RQDIKPEHLQPKMDHVETKVVDKPLPTHDVERAEKSEIKVAQGMASLTVEKPEIKGSRHQ
ERRRDRHERRLERQESSEQEPPKQEPPERRRDRHEKRLERQASSEQETPKQEQSERRRDR
HERRTERQDTIEQDNTRTEPEKQVGKATLADIVEQLQEKEAFQNSPGGRDSPARLANGVD
KLPERTTRPDRPRARDRPKPRRRPRPKDPNQPPGEARRSRSAPAQSSAPPPPPPTHTVQQ
EGYLFRKHELDGPSKKASNRSWVNLYCVLNKGDIGVYKDAKSQSSGATHGGEPLLNLLGA
SCEVASEYKKKKFVFKLRSTDGRESLFQAKDEEEMKNWITAITTCVSEHAEIARWSQSLL
TTSSTDESNIKRESDRRPSGGGRKK
NT seq
7638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgttagttcagatcttgataacatggaagtgcaaacaccccccaataataac
aatcgatgggaacaaacagagcgtccatgggatgagccagcagccacagggaagctgttt
gaatgttcacgaattaaagctctggcagatgaacgtgatgccgtccagaaaaagactttc
actaagtggataaattctcatctttccaaagtgccattgcgtgttaatgacttgtacact
gacctccgagatggctacatcatcaccaaactgcttgaggtgctatctggagagcagttg
cctaaacccactagaggtcggatgcgaattcattatctggagaatgtggacaaggcactg
caattcctaaaggagcaacgcgtgcacctggagaatgttggatctcatgatattgttgat
ggaaatcaccgcttaactctaggccttatctggaccatcatcctccgctttcagatccag
gttataaagatagaaacagaggacagccgcgagacaagatcagcaaaggatgcccttctc
ctttggtgccaaatgaagacatctggatatccggaagtcaatatcaagaactttaccacc
agctggagagatgggcttgcgtttagtgctctgattcacagacacagaccagatactata
gacttcaacaagctgaccaaatcaaatgccacatacaaccttcagcaggcatttaatact
gctgaacaacaactgggccttaccaaacttttggaccctgaagatgtcaatatggagcat
ccagatgaaaaatccatcatcacatatgtggtatctttttatcactacttctccaagatg
aaggcactagctgtggaaggcaagcggattggcaaggtacttgacaaggctattgagact
gagaaagatatcatcaggtacgaggtattggcttctgagctcttggaatggattgagaga
acaatatccataatcaccaaccagaaatttgctaactcactgctgggtgttcagcagcaa
ctccaggtcttcactacctactgtaccactgaaaagccctgcaagttccaggaaaaagga
aatttggaggttttgctatttagtattcagagcaagatgagggaagagaaatgtaaactt
tatgtcccaagtgaaggcaaaaacatttctgacatcaataaggcctgggcaaacttggag
aaagcagagcatgagcgggaagtagctttgcgtaatgaactcatccgtcaggagaaactg
gagctgctttctcaacgctttgatcagaaagcttccatgagggaggcatggctaactgag
aaccagcgcctggtttcccaggataactttggttatgacctccctgccgtggaggctgca
atgaagaaacatgaggcgattgaagctgatatttcctcatatgaagaacgaatacaggta
gtggctgatctggctcaagagttggaggctgagggatattatgatatctgtaggatttct
gcccaaaaggacaacatactacgtcagtggaaccttcttaaggacatgctgaactcccga
agagggaggctggagcagaacttgtccttgcagaaaatattccaggaaatggtttatatg
attgactggatggatgaaatgcaggtccctttatcttccaaagactttggaaaacacttg
ttggaagtggaggacctgctgcagaaacactctttactggaagctgacattgctgctcaa
actgagagggttaattctctgaaccaagctgccctcaaattcactcagatgactgattac
cagccctgtgaccctcaggtcatttgcaaccgtgtggaacatgtcaagagttgcttagac
agtctgcgccagctagctgagaagcgccgcggggaactggaggagtcacgtcgcctgtgg
tgttttctgcaggaagtggaggaggctgaaggctggatctgtgaaaaagaacatatcttg
tctgcaccacagagctatggaaaggatctaagtagcgttcttcgtcttctaagtaaacat
aagatcttggtaggggaactaagaggcaggcatgccatgttacaacagaccctccagaag
ggagagcaggtgctttccaagagacgaaaaggaatgtctgggcttcgtcagcgaatggag
caggtgagacttaagtgggaaaacctagagaaggcatgtgataaccaccagcagaagctt
caggaagcttccagcttctaccagttcagcgctgacacaatggagttagcaggttggctg
caggatacttaccgcttagtctccagtgacgactttggtcatgatgagtactcaacacaa
tccttggtaaagaaacacagagcagcaactgtggaaatcgagaaacacaaagttgctgtg
ttgggtctcagacagcaactgtcagaactgggtgcagagtatagggatcaggttgacgtg
cagattactattgtggaggtggagcagctctacggagaagtggtggaagtatctgccctc
aggaaccaatggcttcaagatgccttggatgtttataagatgtttggtgaggtaaactca
tgtgaggtatggattgatgagaaagagcagtggttgatgaagatggaaattcctcagcga
cttgaagaggttgaggttgttcagcacagatttgagagcctagaccaggagatgaacagc
ctaatggggcgtgtgctggatgtaaatcagattgtacagcagcttcttgagagtggtcat
cccagttcttctgaggttcgtgcttgccaggaccacctaaacagcaggtggaatagaatt
gtggagttggtggaacaaaggaaggaacaattaagttccgttctccgtctccagaattat
ttcctggaatgtaatgaagtaaaatcccagattcgggaaaaaagaagagctatggagact
ccacagtgtggaagtggtgagctaggtggcgtgttgtctcttcagaggaaactttccagt
atggaggctgctttgttggctctggaacccaaacttgttcagcttcagcaagatgcagaa
attcttgccaccagccatcctgctgaaggaatggatgtacttgtgcattttgaggaaatc
agtggagaatgggatgccttaaagaggactcttcaggggtgtgaggactccctgacagtt
gccaacaagctgcaacagttcattcaggacctagacaacttccttacttggttggtaaaa
acacagacagctgtggctgctgaagaacttccatcaaatttaacagaagctgagagactt
ctgggacttcatggttcccttaaagaagagatcagccggtatgaggaagattacaacaaa
attcaggcagtcagtgaccttttaagtctggaagaggcagaccttccatatctatcactg
cagcaatggctacagaagttggaggtgggatggagcaagctgctgcagatgtgggagaac
agaagggaagttcttgttcaggcacacattttccatcttttcctaagagatgttaaacaa
gctgaagcctgtctaaacacacaggaatccacattggctcatgttgagttgccaaacaca
gtcgaaggagtggaagcagcaataaaaaaacataaagattttctgaccactatggagcta
aatgtgcagaaggttacaatagcagtggaggccggagagagcctcatacgacttggaaat
gtgtttgctgatcatgttcaggaacggatcaatgccatccaaaagaggagccagcgtaat
acggcacttgctcaaaaatggctgcagagactgagagaccatctgcagctgcaacacttt
atccaaaactgcaatgagctggatgcctgggtccatgagaaaacgctgatggctcgagaa
agctcgcgggatctgtctcagaaaccccataagaaatggctaaagcaccaggcttttatg
gctgagctctcacagaataaaggttggcttgagaagatagaaaaggaaggtcaacagcta
atccacgaaaagccagagttggctggagtggtgaaaaagaagcttgaggagattcgacag
tgttgggttgaactggagtcaagtacccagtccaaggcccagcaactttttcaagccaca
aaggcagaccatgtgatgcagaactactcagaactcggcaaaaggttataccatttagag
gaacagttacagccaatggattcagtacctgatgtttccagtgttaacactcaactaaaa
aagcttgagacaatggaatcacaaatggaagagtggtacaatgaagttggagaactgcaa
gcacagatttcctctcttcctctggaagtggcaagtcaaaaggcagtggaagagaagcag
aatgaggtgggaaccaaaatggttcgcctgattgagccactgaaggagaggagaaggatt
cttttggcttctaaagagttgcatcaggttactcgagacctggaggatgaaattttctgg
gtgcaagagcgactgcctcttgcaacttcaaaggaacatgggagcaatcttcaaactgtg
cagcaactcatcaagaaaaaccagaacctgcgacgggagattcaggtgcactcccctcgg
gtagatgatattctcgaaagggcaggggcaatagccagcattcgaagtccagaggcagag
ggagtgcgtcttgggtatgagagcctccaggagatgtggaatgtgctaagagaggagaca
gaaagaaggcagcagctactcgacattacctaccaggtgcaacagtattattttgatgta
ggagaagtggagacctggctgagcgaacaggaacttcttatgatgaatgatgagaagggg
aaggatgaacagagcactctgcagctccttaagaaacacctcatgctggaacagactatt
gagaattatgaggagacaatagctcagctctctagacagtgccgtacccttctggatcta
ggacacccagacagcgagcagataagtaagcgtcagtctcagattgatcggctctacgtg
tctctgaaggacctggtggatgagcggaagggacgcctggagcagcagtattggctcttc
cagttaagtcgtgaggtggatgagctggagcaatggatagcagagaaagaagtggtggct
ggatctccagagcttggacaggactatgagcatgtgactcttcttcaggagaaattcaca
gagtttgccactgagataggcatcattggacaagaacgcatctctgcagtaaatcagatg
gtggatgagctcattgactttggccattcagatgcagctattattgcagaatggaaagat
ggtgttaatgaggcttgggctgatctgctggaattgatggaaaccagatctcagatgttg
gctgcttctcatgagctgcacaagtttttcaatgactgcaaagaagtgttaagtcaagtt
gaggaaaagaagcagaggttgcctgaagtaaaggcccaagaagccaagttatctgctgga
tccttgcaaaggatactcagctcttttgaacatgatattcaagttcttgttactcaggta
cgtcaactgcaggaaaatgcagctcaactgcgcactgtttatgctggtgaaaatgctgct
gctattgtgactagtgagcaggaagtaatgcgagcatggaaagagcttctgacatcttgc
gaggactgcagattgcaaataactagtaccagtgatcgtattaatttcctcaatcttgtg
agagacctgatttcctggatggaaagcattacttgccagattggcacaggagaaaagccc
agagatgtgtcatctgtggaagtcttaatgagttaccatcaaggggtaaagagtgagatt
gaggcaagaaacaagaggatttcagactgtgtggagcttggaaagaccctggtcctgaac
aagagaccatcttcagatgagattaagcagagcttggacaggttaatggcaaagaaaaag
gaaatgttggaaaaatggaacaaacattgggagtggcttcaacaaatgttggaggttcac
cagtttgcccaagaagctggagtagcagatgcctggctgactgctcaggaacctattgtt
aaaagccctgagcttggcaacagtgtggatgaggtggagcagctcatccgaagacatgag
gccttccgcaaaacagctgcagcttgggaggagaggtttagttcgctgagacgcctgact
acattggagaaactaaaagcagagcaaaataagcagcctgcaacacctcttcttggccgg
aaagtttttccagacacaactgattattctactcgcccttcccctctttcacatcaaacc
atatatgagaattctgagacaaaattggatcaaaaagaatctcttcccatccctgatggg
ggtcaacaggagatccgaagggtaagaactgacaagggagagacacgggttggatatgct
cgacaggatataaagccagaacatctacagccaaagatggaccatgtggagaccaaggta
gtagataaaccattgccaacgcatgatgtagaaagggcagagaagtctgaaatcaaagtt
gcacagggaatggctagcctgactgtggaaaaaccagaaatcaagggaagtcgtcatcaa
gagaggaggagggacaggcatgaaagaagattggaacggcaagagtctagtgagcaggaa
cccccaaaacaagagccaccagagagaaggcgagatcgtcatgagaagcgattggagagg
caggcatccagtgagcaggaaacccctaaacaagagcagtctgagaggagaagagacagg
catgagaggagaacagaaagacaggatacaatcgaacaagacaatacaaggactgaaccc
gagaagcaagtaggaaaagctactttggcagatatcgtggagcagctacaagagaaagaa
gctttccagaacagccctggtggccgagattctcctgcccgtttagccaatggggtagat
aaacttcctgaaagaacaacaagaccagatcgtccacgggccagagatcgcccaaagcca
aggagaagacctcgacccaaagatcctaaccaacctcctggtgaggcacgaaggtcacgt
tcagccccagcacagagcagtgctcctcctccaccacctcccacccacactgttcaacaa
gaaggatatctgttcaggaaacatgaattggatgggccaagtaaaaaggcttcaaatagg
tcatgggtaaatctttactgtgtattaaacaaaggagatatcggggtctacaaggatgca
aagagtcagagctcaggggccacacatggtggtgagcccctactgaacttgcttggagcc
tcctgtgaggtagccagtgaatacaaaaagaagaaatttgtgttcaaactcaggtcaaca
gatggtagggaatccctctttcaagcaaaagatgaggaggagatgaaaaactggattact
gcgataaccacatgtgtctcagaacatgcagagattgcccggtggagccagagtcttctc
actacctcgtccaccgatgaaagtaacataaagcgtgagtctgaccgtagacccagtgga
ggtggtcggaaaaagtga
DBGET
integrated database retrieval system
