Xenopus laevis (African clawed frog): 108698736
Help
Entry
108698736 CDS
T01010
Symbol
syne3.L
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108698736 (syne3.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108698736 (syne3.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
108698736 (syne3.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
SYNE3
KASH
Spectrin
RhiE-like_linker
ATRX_C
SR_desmoplakin_3
Motif
Other DBs
NCBI-GeneID:
108698736
NCBI-ProteinID:
XP_018085956
Xenbase:
XB-GENE-6486333
UniProt:
A0A8J0TC09
LinkDB
All DBs
Position
8L:complement(79629384..79682677)
Genome browser
AA seq
1590 aa
AA seq
DB search
MESCIRNSCPCSVTCRLVTGSRPCPPQLPISPRLTQALELTCPVSPQPLRIEKLQFQPQS
IVPAVPWTSCPYIAWQQTAPCACQSAQYSDTGRGGGATHKLRVSNPVPADCLLLSIVTRY
WPGQYRTLSVPDFSNEMTQVPQREFETSWENAETWMKNVHERLKINDNTEGPRPALEARL
RETEKICALEPEGKLLLDMVLMAAENHLSKSSEEEKHEIHIKLGKIKCMFEETTVYMTHC
HSRIEWVWLHWNEYLKARDEFYLWVHNMKLTLEPDVELQLGLKQKRWHYEQAQVLLRDVN
NQSCLLDRLLEEAASLYNRIGDPSVDETVQKEMMTEYKQIKRKAKERTSHLENILKEHEA
YYSDVNKFQSWLNSVIEKLKCCVGEATESTEYRLSMLQEISKEVQSGGKELEDLERKSLE
VIKNTSPLGAEEICKELEELRKALADLKRMNNDEEESLLKAHSSENAFLLLARQLEANIN
EFRKAIQRLEESLESGERVKSEDELLALWKTLNATKSALAAEETKGEGVKVQLKELFKFS
KDVQPLSDGVIAAIREYQRAKSKAFKVSTETESALKQHFRIPLLEFQHWKRICERVLDTT
STPVSDAVLNHDCLLQIEKLLEESANIEDKLSILQTKKERISGVLGEQKAKAFLTEVASA
SRERDSLHVVLLERKETLLSLASQSKEFDAAFEHLRKKVSTIRIKAGKESELQPDLVGKE
TQLQRFEMFKDELLKLEPEFKVVASMAESSPTHKLKVSQLSSEYITLHKSLEINKRKSKT
YIKDHLIFNDKLLDLQRWLMVTRQELESFQDSNGHWDVESREKEIQILLSEITEKDIQLQ
QVDSQGLLVMETSSAEGAAHIQNELRQLNASWVSLKLLWEALARTFKDRELQRLALLPPK
ITYENSINQTTDLLPDTELHWTASQSDNGSNEMNNSNDSEEFGPSGIVGSSEEFGPSGIV
GRIVYDTSPQSVTLTSEKSRIPQRTNKTTSVLQENDPSSTTTESEKSSVEINTSITSITS
DSSQSGITVRSDKSRIPTRVNQTSSPSVQLGNGSSFTPGESGRDPNIKTGLLNDTSPPNV
TVRSDNSQIPRRRTQASSSAYDSSLPSNSDNDQTLLGKKQASSSSVLQVTDPLIPSADAM
ESSGTYSGTAYFTSPRNITVRSDDNRIAPRINQLSSNMEDPVSTSEESGKSSSTLKINTG
TAYFTSPRNITVRSDDNRIAPRINQLSSNMDDPVSTSEESGKSSSTLKINTGSAYDSSLP
SNSDNDQTLLGKKQASRTAYYTSPTNITVRSDDNRIAPRINQLSSNMEDPVSTSGESGKS
SSTLKINTGEAALTIRRKDTSLFSIFSYSSIRKQENTFQNTRLEFQAGSPKTTVNLTSPY
NIVSLKRSKKGISLAESVDFVDSSSVQSKEERQTETSGGHMNLLKEFELWLQEENSTLNK
ICSTKALGREEMKSRLSKLQRLQLRIPQGQRLFESLLVSMPAMAVTDNLRLEDLRYQWML
YKSKLRDAGSSSSIKTSEELRGITKKSSGGLCSFLHRVCCAALPLQLLLLLLLLLALLIL
LMQESQNCALSNNFARSFNLMLKYERPPPT
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctgtatccgtaatagctgcccttgctcagtgacatgccgcctagttactggc
tctcgcccgtgcccgccacagctacctatttctcctcgtctcacccaagcactggagttg
acttgccctgtctcaccacagcccttgagaatagaaaaattacagttccagccccaaagc
attgtgccagcagttccctggacgagctgtccttatatagcctggcagcagacggcgccc
tgcgcctgccagtcggctcagtacagtgacacaggaagagggggaggagccactcacaaa
ttacgcgtttcaaatccggtccccgctgactgccttctgctttcaatagtgacccgatac
tggccaggacaataccggaccctttccgtccctgatttttcaaatgagatgactcaagtg
ccgcagcgtgaatttgagaccagctgggagaatgctgaaacctggatgaaaaatgtccat
gagagactgaagatcaatgataacactgaagggcccagacctgccctggaggccaggctc
agggagacagagaaaatctgtgctctggagcctgaaggcaaattactcttggacatggtt
ctgatggcagcagaaaatcatctcagcaagagtagtgaggaagagaaacatgaaattcac
atcaagctagggaaaataaagtgcatgtttgaggagaccacagtttatatgacacactgc
cacagtcgcatcgagtgggtttggctgcactggaatgagtacctgaaagccagagatgag
ttttatctgtgggtccataatatgaaactgaccctggaaccagatgtggaacttcagctg
ggccttaaacagaagcgctggcactatgaacaagcacaggttcttctaagagatgtcaac
aaccagtcatgcctcttggacagactcctggaggaagctgcctccttatacaacaggatt
ggagaccccagtgtggatgagacagtgcagaaagaaatgatgactgaatacaaacaaata
aagaggaaagccaaggaaaggaccagtcatcttgaaaatatattgaaagaacatgaagcc
tattatagtgatgtcaataaattccagtcttggctgaatagtgtgattgaaaagctgaag
tgctgtgtcggagaggccacagagtctacagaatacaggctcagtatgctgcaggaaatc
agcaaggaggtacagagtggtggtaaggaactggaagaccttgagagaaagtcactagag
gtgataaagaatacatcccctctaggagcagaagaaatctgcaaggagctggaggagctg
cgcaaagctctagcagatctcaaacgcatgaataatgatgaagaagagagtcttctcaag
gctcacagctctgaaaatgccttcctacttttggccaggcaactggaagccaacatcaat
gagttccgaaaagccatccagagactggaggagagtctggaatcaggagaaagggtgaaa
agtgaagatgagctgctagctctgtggaaaacattaaacgccaccaagtctgctttagca
gcagaggaaacaaaaggtgaaggggtaaaggttcagctgaaggaactcttcaagttctcc
aaagatgtgcagccactttctgatggagtcatagctgcaatccgggaataccaaagggct
aaaagcaaagccttcaaggtaagcactgagactgaatcagcactcaaacagcacttccgg
attccactgctggaattccagcactggaaacgcatatgtgagagagtcctggataccaca
tcaactcctgtgagcgatgctgttctgaaccatgactgcttgctacagattgagaagttg
ctggaggagagtgccaatatagaagacaaactgagtattctacagacaaagaaggaacga
atcagcggggtgcttggtgaacagaaggcaaaagcctttctcactgaggtggcatctgct
tcaagggaaagggattctctccatgttgttcttctggaaagaaaggaaaccttactgagt
ttggcttcccagagtaaagaatttgatgctgcttttgagcatttgcggaaaaaggtgtca
accataagaatcaaagctggcaaagaaagcgaattacagcctgaccttgtagggaaagag
acacaactgcagagatttgagatgtttaaggatgagttgctgaaattggaacctgaattt
aaagtggtagcttcaatggctgaatcaagtcccactcacaagcttaaagtcagccagctg
tcttcagaatacattaccttgcacaagtcacttgagattaacaaacgaaaaagcaaaaca
tacattaaggaccatctgatattcaatgacaaactgctagatcttcagcgctggctcatg
gtgacaaggcaggagttggaatcatttcaggatagcaatgggcattgggatgttgagtcc
cgagagaaggaaatacagatattgctgtctgagataacagaaaaagatatccagctacaa
caggtagactctcaaggtttattagtgatggagacctcctctgcagaaggagctgctcac
attcagaatgagctgaggcagcttaatgcctcctgggtgtctctgaaattactctgggaa
gcactagcaagaacatttaaagacagagagctacagagactggcactactgccacctaaa
attacatatgagaactccataaatcagacaactgacctcctccccgatacggaactacac
tggactgcgtctcaatctgataatggcagcaatgagatgaacaacagtaatgattctgaa
gaatttggaccaagtggaattgtgggcagttctgaagagtttggaccaagtggaattgtg
ggcagaattgtctatgacaccagtccccagagtgtaacattaacatctgagaaaagccga
ataccacaaagaacaaacaaaacaaccagtgtccttcaggaaaatgatccatcatccaca
acaacagaatctgagaagagttcagtggaaataaatactagcattaccagcattaccagt
gactctagtcaatccgggataactgtgaggtcagacaagagccgaataccaacgagggta
aaccaaacatccagtcccagtgttcagcttggaaatggctcatcctttacaccaggagag
tctgggagggacccaaatataaagactgggcttttgaatgacaccagtcctcccaatgta
acagtcagatcagacaatagtcagataccaaggaggagaacacaagcatccagcagtgcc
tatgacagcagtctccccagtaactcagacaatgatcaaacacttctggggaaaaaacag
gcatccagttccagtgttcttcaggttactgatccacttataccttcagcggatgctatg
gagagttcaggcacttattctggaactgcctactttaccagcccaaggaacataacagtc
agatcagatgataaccggatagcaccaaggataaaccagttgtccagcaatatggaagat
ccagtcagcacatcagaggagtctggaaagagttcaagcaccttaaagataaatactgga
actgcctactttaccagcccaaggaacataacagtcagatcagatgataaccggatagca
ccaaggataaaccagttgtccagcaatatggacgatccagtcagcacatcagaggagtct
ggaaagagttcaagcaccttgaagataaatactggcagtgcctatgacagcagtctcccc
agtaactcagacaatgatcaaacacttctggggaaaaaacaggcatccagaactgcctac
tataccagcccaacgaacataacagtcagatcagatgataaccggatagcaccaaggata
aaccagttgtccagcaatatggaagatccagtcagcacatcaggagagtctggaaagagt
tcaagcaccttgaagataaatactggggaggcagctcttaccatcagaaggaaggacacc
agtttattttctatcttctcctattccagcataagaaagcaagaaaacactttccagaac
acaagactagaattccaggcaggcagcccgaagaccacagtgaatctaacttctccatat
aatattgtctctttaaaaagaagcaagaaaggtatcagtctggcagaatctgtggatttt
gtggattcatcttctgtgcaaagtaaagaagagagacagacagagacaagtggtggccac
atgaatctcttgaaggaatttgagctttggctgcaggaagagaattccacactgaacaaa
atctgtagcacaaaagcattaggcagggaggaaatgaaatccaggctcagcaagctccag
agattacagctgcggataccccagggccagcgcttgtttgaatccttgcttgtttcaatg
ccagccatggctgttactgataatttaagactggaagacctacgttaccaatggatgctt
tataaatccaaactaagagatgctggaagctcatcgagcataaaaacatctgaagagcta
agaggaataactaagaagtcatctgggggtctgtgctccttcctgcaccgggtgtgctgt
gccgcacttccactccagctgctccttctactgctcctcctcttggcattgcttatcctt
ctgatgcaggagagccaaaactgcgccctttccaacaactttgcccgctccttcaacttg
atgctaaaatacgaaagaccccctcctacttaa
DBGET
integrated database retrieval system
