Xenopus laevis (African clawed frog): 108698754
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Entry
108698754 CDS
T01010
Symbol
atl1.L
Name
(RefSeq) atlastin-1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108698754 (atl1.L)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108698754 (atl1.L)
Autophagy
ER-phagy
ER-phagy recepters
108698754 (atl1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
DUF2207_C
FA_desaturase
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
108698754
NCBI-ProteinID:
XP_018086001
Xenbase:
XB-GENE-17340762
UniProt:
A0A974C983
A0A1L8F9Q3
LinkDB
All DBs
Position
8L:83942547..83978275
Genome browser
AA seq
558 aa
AA seq
DB search
MTRNRKERNSWGGFTDRNYDWSSEEEEYEKKAHPVQVLVVKDDHSFELDETALNSILLSE
AVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYKTDTVDWLGDYNEPLSGFSWRGGSERET
TGIQIWSEIFLVENPDGNKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQ
NVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFPYGSDGGMNFLEKRL
KVSENQHEELQNVRKHIHSCFTNISSFLMPHPGLTVATNPNFDGKLKEIDEEFIKNLKVF
IPWLLSPQNLDVKEISGNRITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAV
ATAKDLYNKKMEEVCGGDRPFLAPTDLQQRNQHLKEEAVKLFRGVKKMGGEEFSRRYLQQ
LENEIDELYVQYIKHNDSKNIFHAARTPATLFVVIFITYVLAAVTGFIGLDIIASLCNMI
MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGSTNEALYKLYSAAATHRHLYHH
AFPVPQADAREETERKHI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgactcggaaccgcaaggagaggaacagctggggtggatttacagacagaaattatgac
tggagctcagaggaggaggagtatgagaagaaggctcacccagttcaggtccttgtggtt
aaagatgatcattcctttgagttggatgagacagcattgaacagcattttgctctcagaa
gcagtcagggacaaggaggtggtcgctgtgtcagtagctggagcatttagaaaaggaaaa
tctttcctgatggactttatgctgagatatatgtacaaaacggatacagttgattggctt
ggggattataatgagccactgtctggtttctcctggagaggaggttctgaacgggaaacc
acaggaattcagatatggagtgaaatcttcctggtggagaatcctgatggcaacaaggtg
gcagtgttactaatggacacccaaggaacatttgatagtcagtccacactcagagattcc
gctacagtatttgccctcagtactatgattagctccatacaggtgtacaacttgtcccag
aatgtgcaggaagatgaccttcaacacctacagctatttacagagtatggaaggctggcg
atggaagagacctttctgaaacccttccaatcccttattttcctggtccgtgactggagt
tttccatatgaattcccgtatggttctgatggaggcatgaactttttggaaaagcgccta
aaggtctctgagaaccagcatgaagagctgcagaatgtgagaaagcacatccactcctgt
ttcaccaacatctcaagctttctcatgccccatccaggcctcactgtagcaacaaaccca
aactttgatggaaaactcaaagaaatagatgaagaattcataaagaatctgaaagtattt
attccatggcttctgagccctcagaacttggatgttaaagaaatcagtggaaaccgaatc
acttgtagaggtctggtggagtattttaaggcttatataaagatttatcaaggtgaagaa
ttgccgcatcccaaatccatgttgcaggcaacagctgaggccaacaatctcgcggctgtg
gcgacagcaaaggatttgtacaataagaaaatggaagaggtatgtggaggtgacagacca
ttcttggcacccaccgatctgcaacagcgaaaccagcatctgaaagaagaagccgtaaag
ctgtttcgcggagtaaaaaaaatgggaggagaggaattcagccgtcgttacctgcaacaa
ctggagaatgaaatagacgagctgtatgtgcagtacatcaagcataacgacagcaagaat
atattccatgccgctcgcacccctgcaacactctttgtggtcatattcattacttacgtg
ctggctgctgttactggttttataggcttggacataatagccagtctgtgcaacatgata
atgggactgactcttatcacactgtgcacctgggcatatatcagatattcaggggaatac
agagagttgggagcagtaatagatcaggtggctgcagctctgtgggaccagggaagcacc
aatgaggcattatacaaactatacagcgctgcagccactcacagacacttgtaccatcat
gctttcccagtgccacaggcagatgcccgtgaggagacagagagaaaacacatataa
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