Xenopus laevis (African clawed frog): 108698871
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Entry
108698871 CDS
T01010
Symbol
rabgap1.L
Name
(RefSeq) rab GTPase-activating protein 1
KO
K20284
Rab GTPase-activating protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108698871 (rabgap1.L)
Membrane trafficking [BR:
xla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108698871 (rabgap1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
UPF0242
PTB
Spore_III_AF
Motif
Other DBs
NCBI-GeneID:
108698871
NCBI-ProteinID:
XP_041428409
Xenbase:
XB-GENE-6488663
UniProt:
A0A8J1LH88
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All DBs
Position
8L:15989035..16102730
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AA seq
1071 aa
AA seq
DB search
MDDKTSVGKISVSSDSVSTVNSEDFVLVYKQGDEMHSANNGSDDEKTGLKIVGNGSEQQL
QKDLEDVLMDTPAEDQDLHVKEIENAQAEEDPVQPSNEACITSVNTVNSSSVGLQKPDMS
LPVKAAQEECLLSTSMFSSVPDEDSVLFSKLTYLGCASVNAPRSEIEALRMMSILRGQCQ
NALDVTLSVPNFSEGTVRLLDPQTNTEIAMYPIYKILFCVRGHDGTTESDCFAFTESHYN
AELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSASTPPQMSDSDIFTFSVSLEIK
EDDGKGYFSAVPKEKDRQCFRLRQGVDKKIVIYVQQTSNKELAIERCFGLLLSPGKDVRN
SDMHLLELESMGKSSDGKSYIITGSWNTKSPHFQAVNEETPKDKVLFMTTAVDLVITEVQ
EPVRFLLETKIRVCAVNERLFWPFSKRSSTENFFLKLKQIERKERKNNCDTFYEVICLES
ESERERRKTTASPSIRLLQYGQQGTSIPSPPEDDEEDDNDEPLLSGSGDVSKECAEKILE
TWGDLLSKWHLNLSVRPKQLSGLVRSGVPEALRGEVWQLLAGCHNNDCLVEKYRLLITKE
SPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDDEIGYCQGQSFLAAVLL
LHMPEEQAFSVLVKIMFEYGLRELFKQNFEDLHCKFYQLERLMQEYITDLYTHFLEISLE
AHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTDFEGA
LKYFRVQLPKRYRSEDNAKRLMELACSLKISQKKLKKYEREYHMMREQQAQQEDPVERFE
RENRRLQEANMRLEQENDDLAHEIVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAE
EEKRLLEEEAAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSDRLEKQQSSNKAEI
EKIRQKVDGCERCREFFNTEGRLKPVSFLKESCTMEDTDEEKESLKNQLREMELELAQTK
LQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTISSIKTATGVQGKETS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaagacttcagtggggaagatcagtgtttcctctgattctgtgtcgaccgta
aacagtgaagactttgtgctggtttataagcaaggggatgaaatgcattctgcaaataat
ggtagtgacgatgaaaagaccggactaaagattgtggggaatgggagtgagcagcagctt
cagaaggaccttgaggatgtccttatggacacaccagctgaagatcaggatctgcatgta
aaggagattgaaaatgctcaggctgaagaagacccagtacaaccctcaaatgaagcctgt
attacatctgtgaatacggtcaactcatcatcagtaggactgcagaaaccagacatgagc
ctaccagttaaagcagcccaggaagaatgcctactcagcaccagtatgttctcgtcagtt
cctgatgaggacagtgtcttgttcagtaagcttacttacctagggtgtgcatctgtaaat
gctcctcgaagtgagattgaggcactaagaatgatgtctattctgcgggggcagtgccag
aacgcactagatgttaccctgtctgtacctaatttttccgaaggaactgtgagacttctc
gaccctcagacaaacactgaaatcgcaatgtacccaatctacaagattttgttttgtgtt
cgaggacatgatggaactacagaaagcgactgttttgcattcactgaaagtcattacaat
gcggagctctttagaatccacgtgttccgttgtgagatacaggaggctgtgagcaggata
ctttacagttttgcaacagctttccgtcgttcagccaaacagacaccactctcagcttct
acaccaccacaaatgtcagacagtgacatttttactttctctgtatcccttgagattaag
gaggatgatggcaaaggctatttcagtgcggtccctaaagaaaaagacagacagtgcttc
agacttcgccagggggtagacaagaagattgtcatttatgttcagcagacttccaacaaa
gagctagccattgaaaggtgttttgggctgcttctcagtcctgggaaagatgtgcggaat
agtgatatgcacctattagaactggaatccatgggcaaaagttctgatggaaaatcatac
attatcactgggagttggaatacaaaatccccgcattttcaggctgtgaatgaagaaact
ccaaaagacaaagttcttttcatgaccaccgctgtagatctagtgattacagaagttcag
gagcccgtacgtttcctcttagagaccaagattcgagtctgtgcagtcaatgaacgcctg
ttttggccttttagcaaaaggagttccacagaaaatttctttctaaaactgaagcagatt
gaacgtaaagagcggaagaataactgtgataccttttatgaagtaatatgtttggagagc
gagtcagagagagagagaaggaaaacaactgccagtccatcaatccgtctgttgcagtac
gggcaacaaggaaccagtattccctccccaccagaagatgatgaagaagacgataatgat
gaacctctcttgagtgggtctggtgatgtgtctaaggaatgtgctgagaaaatcctagaa
acctggggtgatcttctgtcaaaatggcatctaaatctaagtgttcggccaaagcaacta
tcggggcttgtaaggagcggtgtgccagaggcccttagaggagaagtgtggcaactgcta
gcaggatgtcacaacaatgactgcctggtggaaaaatacagactgctcattactaaagag
tccccgcaagacagtgctattacacgggatatcaacagaacttttccagctcatgattac
ttcaaagacacagggggcgatgggcaggactccctttacaagatttgtaaggcctattct
gtgtatgatgacgagattggttattgccaaggacagtcttttcttgctgctgttcttctg
ctgcatatgcctgaagaacaagcattcagtgtcttggttaaaatcatgttcgagtatggt
ctcagggaactcttcaaacagaattttgaagatctgcattgcaaattttaccagcttgag
cgcttgatgcaggagtacatcacggacctttacacccatttcttagagatcagtctggaa
gcccacatgtatgcgtcccagtggtttctcaccctctttactgctaagtttccactatat
atggtcttccacatcattgacttgctgctgtgtgagggaataagcgtcatattcaacgtt
gcacttggattgttaaaaacttctaaagatgacctactgttgacagactttgaaggagct
ttgaaatatttccgagttcaacttcccaagcgttaccgttctgaggacaatgccaaaagg
ctgatggaactagcctgcagcctaaagattagccagaaaaaactcaagaaatacgagcgg
gagtaccacatgatgagagagcagcaggcgcagcaggaagaccctgtggaaagatttgag
cgtgaaaaccgtcggttgcaggaggcaaacatgaggctggaacaagaaaatgatgacctc
gcccatgaaattgtcactagtaaaatagcactacgtaaggatctggataatgcagaggaa
aaagctgatgctcttaataaggagttactaatgactaaacaaaagcttattgatgcagag
gaggagaaaagactcctagaggaagaagctgcacagctgaaggaaatgtgtcgtcgggag
ctcgataaagcagagtctgaaatcaagaagaatagctcgataattggagattacaaacag
atatgttcccaactaagcgatcgtcttgaaaagcaacagtcttcaaacaaagcagaaatt
gagaaaatccggcaaaaggtagatggatgcgagcgttgcagagaatttttcaacacagag
ggtcgtttgaagccggtcagctttttgaaggagagctgcaccatggaggacacagatgaa
gagaaagagtctctgaagaaccagcttcgggagatggagttggaactggcccaaacgaag
ctgcagctggtagaggcagagtgtaaaatacaggacttggagcaccacttgggccttgct
cttaatgaagttcaagctgcaaaaaagacctggttcaacaggaccatcagctccataaaa
actgccacaggagtgcaaggaaaagagacctcttaa
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integrated database retrieval system
