Xenopus laevis (African clawed frog): 108698897
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Entry
108698897 CDS
T01010
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108698897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108698897
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108698897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
108698897
NCBI-ProteinID:
XP_041429836
UniProt:
A0A8J1LKN7
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Position
8L:37963585..37977306
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AA seq
500 aa
AA seq
DB search
MADPGLEEELWLYGGSLARDEENGAAAGNTPSLGAQQDTGAERKDTTEAKQPVTQSCSDT
EEDSDKDSDDDDDDDDVKVTIGDIRTGLPYCMTSEGNLRTNRGYGTSVGKQRGIDFTSPG
CINGLPVLEVDLDSFEEKPWRKPGADLSDYFNYGFNEATWKVYCEKQRRLQLGLDNGYHP
CSKENRIRVQQGRTGRASNGAEPESESSAGCEGTTIPENTSNRKPGGTMDVVCNITTVEG
RRWDCHEPEEIPIQVDHTYTPHLIPQHQHPPPPLVPPPPITSNPPPLFSGPPPHFLQRPP
PTNQMPPPLRPPALLPPLMPPPPAHHPPVNGPPVPYNSRPPIRHGYNSADPAIMSYPPVS
INHTPWVTTMDKGNSSTGRNDWLLRREQEWDLGRDRKHTPNNSYRNEGSQYSYYGHGRSS
EYQPKYQRSREGSRERSWEQEDRPRGEHRQRDREERRHKSSRRKMDSEERENHRRPKRKK
SKRGKEDKGSSDEVNRESRE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccggggctggaggaggagctgtggctgtatggaggttctctggctcgtgat
gaggagaatggagcagctgcagggaacaccccaagtttgggtgcacagcaggacacgggt
gctgagaggaaggacaccaccgaggctaaacaaccggtcactcagagctgcagtgatacc
gaggaggacagtgacaaagacagtgatgatgatgatgatgatgatgatgtgaaggtcact
attggagacattagaactgggcttccatactgcatgacatctgaaggcaacctaagaacc
aatagaggctacgggacttcagtaggtaagcagagaggaatagattttacttctcctgga
tgtataaatgggttaccggttttggaggttgatttggattcttttgaagaaaagccatgg
cgaaaaccaggtgctgacctttctgattatttcaattatggcttcaatgaagcaacatgg
aaggtgtattgtgagaagcagagacggcttcagctgggactggacaatggctatcatccc
tgcagcaaggagaacagaataagggtgcagcaggggagaacaggcagagcaagtaatgga
gcagaacctgaatctgaaagcagcgctggatgtgaaggaacaactataccagaaaataca
tcaaataggaaaccaggaggaacaatggatgtggtttgtaacatcaccactgtcgaagga
agaagatgggactgccatgagccagaagagattcccattcaggtagatcacacatacaca
ccacatctgattccacaacatcagcacccacctccaccccttgtgccgccacctcccatc
acatcaaatcctcctcctctgttttctggtcctcctcctcactttcttcagcggcctcct
cctaccaaccaaatgccacctcccctgcggccgccagccttactgccgccactgatgccc
cctccaccagcacatcatccacctgtaaatggtccccctgttccatacaacagcagacct
cctatacgccatgggtataactcagcagatcctgctatcatgagttatcctcctgtttcg
atcaatcacaccccttgggtgacaaccatggacaaaggaaacagcagcacgggaaggaat
gattggctactgaggagagagcaagaatgggatctggggagagacaggaagcacacccct
aataacagttataggaatgagggaagtcagtactcctactatggccatggcaggagctct
gagtaccagccaaagtaccagcgcagtcgggagggcagtcgggagcgcagttgggagcag
gaggaccgaccaagaggggagcaccgccagcgagacagagaggaaaggagacataaatct
tctcgtcgcaaaatggatagtgaggaacgtgagaatcacaggcgtcctaagcgtaagaag
agcaagcggggaaaagaggacaagggcagcagcgatgaagtgaaccgtgaatccagggag
taa
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