Xenopus laevis (African clawed frog): 108698908
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Entry
108698908 CDS
T01010
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108698908
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
108698908
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108698908
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108698908
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Protocadherins
108698908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
He_PIG
YbhQ
Motif
Other DBs
NCBI-GeneID:
108698908
NCBI-ProteinID:
XP_018086263
UniProt:
A0A8J0TKD9
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Position
8L:46674016..46682360
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AA seq
853 aa
AA seq
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MERIQICAIILLTILEFTTSTSELKFYILEEQNEGTYIGSLKNESLASPPFLYNLLPPSI
YFHLDKQTGDLYTTAYKLDREYLCPQDILNQCMVEIDVFVSSQEHAEIAKIKIFILDIND
HAPFFTDKIIELAVQEDAAVGTIFPIDHSASDPDAGQNSVLIYHLNSTDDVFVLGNNSQL
LSFTLQQPLNHESKSEYYMDLIVTDKGLPPLSASALIIVKIMDVNDNCPVFLTSNISINL
PRNTSINSTVAKLEAVDDDTGENSIIQYIYSNRVPVESQKLFYLESTTGIIRLAEFIHDD
TPNNHKLKVLAIGPGCVPAVATVTLVIQEFKRKKPKMEFRLIATQEEEGVSVEEDVPINT
IIAILEIRDPDYSILRPVYINGTIPFSLRVSENSPDTYLLLTSGILDFELKQKYKIQVLG
NATFDNLIVYQASLNVKLEDVNDNAPQFSQSVLEASIEENNNPGAVILTLSAFDKDSESN
GDISYSFGGELPMEFSIDASNGILAATVSFDREKVTSYTLIVVASDHGSPAKNSSCTVII
TILDENDNAPIFLTNELTFYVPENLPRQGKVGILNVKDADFGVNGEISVSILNTTLLFSV
DQNIIILEDYLDYESEYKYDLWIEALDKGNPPLSTTVKVIIMVLDMNDNAPLFLLPESNF
SYVLVPPDTSKGSPVTKVHAVDYDAGMNGAVRYSGFGEVGPHSDLFTIDNITGNITLKES
TTGHHCGLYHFLVKASDQGYPKALSTIVRINILLNHSISNRSYLESIIMAKTEVPTENQA
ILLSPCKQYHKMAQFSWSLNALIFLGIVILCILFCGTGTLMLFCRRKGNAKRRKKADVQI
PLKLNADYWNNIK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtatacagatatgtgccatcattctgctcacaattctggagttcaccacctca
acatcagaactcaaattttatatcttagaggagcaaaatgaaggcacctacattggatct
ttaaagaatgagagtttggcatcacctccattcctgtacaaccttctcccaccatcaatc
tacttccatctggacaagcagacgggagatttgtataccaccgcatacaaactggacaga
gaatatttatgcccacaggatattttaaatcagtgtatggtggaaattgatgtatttgtt
tcttctcaagaacatgcggaaattgcaaagatcaaaatctttattttggatattaatgac
cacgcaccctttttcacagacaagatcattgaactagccgttcaagaggatgcggcagta
ggaaccatatttcctattgaccactcagctagtgacccagatgctggacagaacagtgtt
ttgatctatcatttgaacagtactgatgatgtgtttgtattggggaacaattcacaatta
ctttcattcaccctacagcaacctttgaatcatgaatctaaaagtgaatactatatggat
ttaattgttacagataagggacttccgccgttatctgccagtgccttgattatagtgaaa
ataatggatgtgaatgacaattgtcctgttttcctcacaagtaatatttctatcaatctc
ccaagaaacacctctatcaatagtacagttgccaaactggaagccgttgatgacgacact
ggtgagaacagcatcattcagtatatatacagcaacagagtcccagtagaatcccaaaag
ctattttatttagaaagcacaactggaatcataagattagctgaatttatacatgatgac
acccctaataatcacaagctcaaagttttagccattggtcccggatgtgttcctgcagta
gctactgtaacattagtaatacaagaatttaaaagaaaaaagccaaagatggaattccgc
ctaatagcaacccaagaggaggagggagtctctgtcgaagaagatgttcctataaataca
atcattgctatcctagaaattagagacccagattatagcatcctcaggcctgtctacata
aatggcacaataccattctctctaagagtctcagaaaattcaccagacacctatttgcta
ttaacaagtggaatcttagactttgaactgaaacaaaaatacaaaattcaggttcttgga
aatgctacatttgacaacttaattgtctaccaagcatcactcaatgttaagcttgaggat
gtaaatgacaatgctccacaattctcacagagtgtgctggaagcatccatagaagaaaat
aacaacccaggagctgttatattgacgctttctgcatttgataaagacagtgaatccaat
ggagatatttcatatagctttggtggagagttgcctatggaattttccattgatgcctct
aatggaattcttgcagcaactgtttcttttgaccgagaaaaagtaacatcttacacttta
attgtagtggcttcagatcatggctcacctgcaaagaacagttcatgcacagtaattatc
actattttagatgaaaatgacaatgcacctatcttcctcactaatgagcttacattctat
gttcctgaaaatcttccccgacaaggtaaagtaggaatcctaaatgtaaaagatgctgat
ttcggagtaaatggggagatatcggtgtccatattgaacaccaccctgctcttttcagta
gaccagaatatcataatacttgaggattacttagactatgaaagtgaatataagtatgat
ctatggattgaagctcttgacaaaggtaatccacccttgagtaccaccgtaaaagtgatt
attatggtgttagatatgaatgataacgcaccgctgtttttgctgccagaatcaaacttt
tcatatgtgctagtacctccagatacctcaaagggatctcctgtaacgaaggttcatgca
gttgattacgatgctggtatgaatggagctgtacggtatagtggctttggggaggtgggc
ccgcatagtgatctctttacaattgataacattacaggtaacattacactgaaagaaagc
accactggacatcactgtggcctttatcactttctggtgaaggcaagtgaccaaggatat
cctaaagccctttccactattgttaggattaacattctcctcaatcatagtataagcaac
aggagttatctagaatccatcattatggccaagactgaagtgccaactgaaaaccaagct
attctgttaagcccgtgcaaacagtaccacaaaatggcccaattttcttggtctttgaat
gccctgattttccttggcattgtaattctctgtattctcttctgcggtacagggacgtta
atgcttttctgtagaagaaaagggaatgccaaaagaaggaaaaaggcagatgtgcaaatt
ccattaaaactaaatgctgattactggaataatataaaataa
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