Xenopus laevis (African clawed frog): 108698937 Help Entry 108698937         CDS       T01010                                  Symbol skiv2l.L Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism xla  Xenopus laevis (African clawed frog) Pathway xla03018   RNA degradation Brite KEGG Orthology (KO) [BR:xla00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     108698937 (skiv2l.L)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:xla03019]     108698937 (skiv2l.L) Enzymes [BR:xla01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      108698937 (skiv2l.L) Messenger RNA biogenesis [BR:xla03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      108698937 (skiv2l.L)   mRNA degradation factors    3'-5' decay     Ski complex      108698937 (skiv2l.L) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel Helicase_C MTR4-like_stalk DEXQc_Suv3 ResIII DUF3516 Motif Other DBs NCBI-GeneID:  108698937 NCBI-ProteinID:  XP_041428816 Xenbase:  XB-GENE-6487148 UniProt:  A0A8J1LGY7 LinkDB All DBs Position 8L:65611969..65646539 Genome browser AA seq 1249 aa AA seqDB search MNTLDLSSRDPLDLPLSLLEVGIAGRLELITDHAKCNGSSVPLSTIPNGLPPYDVDLSYE VIQKYLADPEWLSIHHFDRCQRSWPRVKNLDSLYHMEITAPHMELSVERNAATGELRGIN ETSVDHTSLSAQNSLSLRRPPGPLSQSVRGSSSNFPFWPGGMDEPTLEQIKHIGDEEEVL DFDNDLLTVPPGWKHGMNFKQSDVLRPSGTLTLTSLLGSLEDFTFGDSSDDEDTVENHSG AGKEKSKTEGLQRSNSLEELGLETKSPPVLAPLFPEVEVPKEHWAVPLDSNSPVADFYKQ IPDLAFKHPFELDTFQKKAIQCLEAGSSVFIAAHTSAGKTVVAEYAIALSLKHMTRAIYT SPIKALSNQKFRDFKITFGDVGLITGDVQLYTGASCLIMTTEILRSMLYNGSDVIRDLEW VIFDEVHYINDAERGVVWEEVLIMLPDHVNIILLSATVPNTVEFADWIGRIKKKNIYVIS TTRRPVPLEHYLYTGNSQKTQNQFFLLVDASGGFQTKGYYAAVEAKKERSSKYSQTFGAK HPHGVGPGHDKGTWLSLVQSLKMREALPVVVFTFSRTRCEQNATALSTVDLCTTAEKSEV QTYYTKCLSRLRGGDRQLPQILHMLDLLKRGIGIHHSGILPILKEVVEMLFSKGLVKILF ATETFAMGVNMPARTVVFDSIRKHDGSNFRDLTPGEYIQMAGRAGRRGLDNTGMVIILCK ADVPEMSDLHKMMLGKPTQLQSQFRLTYSMILNLLRVEALRVEDMMKRSFAESRTQRDSK AHEQRIKLLTQQMADMGDIECSGDLADLRDYFVTVQELIHTRENVQKRVVESINGMKCLS VGRIIIISTEYHPWVPGVILQVSSDASNRVYTTLVLCEKKREIGVTHLETREKEGKKAPV PEDLLMGKVFRPEGPCDYKLLKLRSSDINIVTGKTLRIHADKILDDITRSQMPRYRNDPP GPAVSSVTQELSRLSDLPPGSLSSLCPVNDLQLKDLELVEAVSRGKKLEGALQSFTCPNS PRFNTQYILLEQRSQVLNELERLRFLTSDQSLSLLPEYQQRVNVLRTLQYIDDGGAVQLK GRVACEVSSHELLVTELVLDGALSPLAPEEIAALLSCLVFQHKTQCEPRLTDILKQGVKK VRELAERLALIQRECGLRESVEDFVAQYKFGLTEVVYEWARGMPFSEIMTLTDIQEGLIV RCVQRLDEACRDVRSAARLVGDATLCAKMDAASQLIKRDIVFAASLYTQ NT seq 3750 nt NT seq  +upstreamnt  +downstreamnt atgaatacattagacttatccagtagggatccactggatcttcccctttcactactagaa gtgggtattgctgggagattggaacttatcacagatcatgccaaatgcaatggatcttcc gttcctttatctacgatccctaatggactaccaccttatgatgttgatttgtcatatgaa gttatccagaaatatctcgctgatcctgagtggctttctattcatcactttgacaggtgc cagaggtcctggccacgagtaaagaacttggactccctttatcacatggaaatcacagct ccgcacatggaacttagtgtggaacgaaatgcagctacgggggaattacgtggaattaat gagacttctgtggatcacaccagtctgtcagctcagaattccctctctcttcgccgcccc cctggccctctttcccaatctgttagaggcagcagctcaaactttcctttttggccaggt gggatggatgaaccaacacttgaacagattaaacacataggagatgaagaagaagttctg gactttgacaatgatttacttactgttcctcctggatggaaacatggaatgaatttcaaa cagtcagatgtattgcgcccttctggtacactcaccctcactagcttgttagggtcattg gaggatttcacctttggtgattctagtgatgatgaagacactgtggagaaccacagtgga gctggcaaagaaaaaagtaaaacagaaggactgcaaaggagcaacagcttggaggagctt ggattggagaccaagtctcctcctgtccttgcaccgttgtttccagaggtagaagttcca aaagagcattgggcagtgcccctggatagtaattcacctgttgctgatttttataaacag atccctgacctggccttcaagcacccatttgagctagatacgttccagaaaaaggctatc caatgtctggaggctggctcctctgtatttattgcagctcacacatctgcaggcaagact gtggtggctgagtatgctatagcattgtcactgaaacatatgacaagggctatttacacc tcccccatcaaagcactgtctaaccagaagtttcgagatttcaagataacatttggtgac gttggattaattactggggatgtccagctatacaccggagcttcctgcctaattatgacc actgagatcctgcggtctatgttatacaatggttcagatgtaattcgggatttagagtgg gttatctttgatgaggtccattacattaatgatgctgagagaggtgtggtgtgggaagag gttctcatcatgttacctgaccatgtcaacatcattcttcttagtgccactgttcccaat acagtggagtttgctgactggatagggaggataaagaagaagaacatttatgtgatcagc acaactcgtcgccccgtcccattggaacattatttgtatactggaaacagccaaaagaca cagaatcagttcttcctgttggtggatgcctctggaggattccaaacaaaaggatactat gctgcagttgaggcaaagaaagaacgatcctctaagtactcgcaaacatttggtgcaaaa cacccgcatggagtaggacctggacatgataagggaacatggttgtccttggtgcagtct ctcaagatgcgggaggcactgcctgttgtggtatttacgttctcacgcacaaggtgtgag cagaacgctacagcattgagcactgttgacctgtgcaccacagcagagaaaagtgaagtc caaacttactacacaaaatgtcttagccgcctacgtggaggagaccgtcaactgccacag attttacacatgcttgatctgctaaagagaggaattggaattcatcacagtggtatcctg cccatcttgaaggaagttgtagagatgctgttcagcaagggacttgtcaaaatcctcttt gctacagagacttttgccatgggagtaaacatgcctgcacgcacagtcgtttttgattca atcagaaaacatgatggatccaacttccgagacctgacaccaggggagtatatacagatg gctggccgtgcaggacgtcgaggtctagataacactggaatggtgattatattgtgtaaa gcagatgtaccagagatgagtgacctgcacaagatgatgctgggaaaacccacacagcta caatctcagttccgtctcacttattccatgattctgaatcttcttcgtgttgaagctctc agggttgaggatatgatgaagaggagttttgccgagtccaggactcaaagagacagcaaa gcccacgagcaacgtataaagcttcttacccaacagatggcagacatgggtgatattgag tgttctggagacctggcagatctccgtgactactttgtcactgttcaggaactcattcat acccgtgagaacgtgcagaaaagagtggtagagtctatcaatggaatgaaatgtttgagt gtgggtcgcatcatcatcatcagtactgagtatcacccatgggtgccaggtgtgattcta caggtatcttctgatgcctccaatagagtttataccactcttgtgctatgtgagaagaaa agagaaattggagtcacacatctcgagacacgagaaaaggaaggaaagaaagcacctgtt cctgaagatttgctgatgggcaaagtgttccgacctgagggcccctgtgattacaaactt cttaagctccgctcatcagatataaatattgtaactggaaaaacattacggatccatgca gacaagatcctagatgatattaccaggagccagatgcctcgctacagaaatgaccctcca ggccctgcagtctcaagtgtgacccaggagctctctcggctctctgatctacctccaggc tccctatcctcgttatgtccagtcaatgatcttcaacttaaggacctggaactagtggag gcagtaagcagaggaaaaaagctagaaggggcattacagagcttcacgtgtcctaacagt cccagattcaacacacagtatattctcctggagcagagatcacaggtcctgaatgagtta gagcgacttcgcttcttgacatctgaccagtcactgagccttttgccagagtaccagcaa agagtcaatgtccttcgcacactgcagtatatagatgatggtggggcagttcagctaaag ggcagagtggcctgtgaggtcagcagccatgagctcttggtaactgagctggtcctggat ggtgcactgtcgccactagcacctgaagaaattgcagctttgctttcatgtctggttttc cagcacaagactcagtgtgaaccccgtcttaccgacatccttaagcagggagttaaaaaa gtgcgtgagctggctgagcgcttggcgctaatacaacgagaatgcggcctgcgtgagtcg gtggaagactttgtggcccaatataagtttggtctcacggaggttgtctatgaatgggca cgtggcatgcccttctctgagatcatgacactaaccgatatccaagaaggcttgattgtg cggtgtgtgcagcggctggatgaggcttgtcgagatgtacgctcagcagcacgccttgta ggagacgcaacactctgtgcaaaaatggatgccgcatctcagcttattaagagagacatt gtctttgctgccagcttgtacactcagtag

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