Xenopus laevis (African clawed frog): 108699122
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Entry
108699122 CDS
T01010
Symbol
naf1.L
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
108699122 (naf1.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
108699122 (naf1.L)
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Gene cluster
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
108699122
NCBI-ProteinID:
XP_018086493
Xenbase:
XB-GENE-6486408
UniProt:
A0A8J0TCY8
A0A974DX90
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Position
1L:55035073..55080153
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AA seq
569 aa
AA seq
DB search
MMLSVKPQRHFGPEPRSACLRTTNLGEKHQEGCINEGTACRLATAVIRSVLEHRRAIEKL
ATLAVRKNPRLSFLHVVMETQHGTPSTDSVIEGNNFPVHETEIMDNCIFSGVNDGLDIAS
QAAEKMHQNDNISNTDEQEKVDAPVLEICEPVGKPALDQNSTCHQEQEERMEVTVQLENL
NFKNEASMIKAEDNNETKDSSSEDSSSDSDTDSDSSSSSSSILLPVEEEEVPNANNDLPL
KTKGELLINELPAVEELSIVLPEDVELKPIGMVSSIIEQLVIIESMKDVPPLNEDSVIFN
EGRNAVGKIFEIFGPVPHPFYVIRFNEKGQIENKGIKIKDTMFFAPKVEDFTQYIIPDKL
KIQKGSDASWTNDHEPPADVLDYSDDEKEREAKQKKKGNNLAKKKIQSDQDENSSSVHEQ
NRNYRGQNVSRPPSRHNYGPRFSRGRAAQLHNNAFGQHPRTYFQPGFPSPHMMNQPYPFH
SMQAQEYSSALPSNGHGTPVSHYYSSPYGHVHPYSLPPPPPPPPDMIWSEQNNPLHFMQN
SQFYTSPPPPPPPPPLGNPNQSSFDPNYN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcagcgttaagccccagcgtcactttggccctgaacccagaagtgcgtgcctg
cgcacaaccaaccttggagagaagcaccaggagggctgcataaatgaagggacggcatgc
cgcctagccacagcggtaattcgctctgttctggagcatagaagagctatagaaaagttg
gcaaccctagccgtgaggaaaaatccgcgcctgagttttctgcatgttgtcatggaaaca
caacatggaactccatcaactgacagtgtaatagagggcaataattttcctgttcatgaa
acagaaattatggacaactgtatattttctggagttaatgatggcttagatattgcctca
caagcggctgaaaaaatgcatcaaaatgacaatatttcaaatactgatgaacaggagaaa
gttgatgctccagtgttggaaatctgtgaacctgtgggcaaacctgccttggatcaaaat
tcaacatgccatcaggagcaagaagagcgcatggaggtgactgttcagttggaaaacctt
aattttaaaaacgaagcatcaatgataaaggcagaagataataatgaaacaaaagacagc
tcttccgaagactctagttctgatagtgatactgactctgattcgtcatcatcttcttcc
tccatacttctgcctgtagaagaggaggaagttccaaatgcaaataatgaccttccttta
aaaacaaagggtgaacttctaatcaatgaactgcctgcagttgaagagttgtccattgtt
ttacctgaagatgtagaactgaaacctattggaatggtctccagcattattgaacaactc
gtaatcattgagtctatgaaagatgttccccctcttaatgaagacagtgtgatttttaat
gaaggtcgaaatgctgttgggaagatatttgaaatatttggaccagttccacatccattt
tacgtgattcgatttaatgaaaaaggtcagattgaaaacaagggtatcaagataaaggac
acaatgttttttgcacccaaggttgaagacttcactcagtatataatacctgataagttg
aaaatacaaaaaggttctgatgcttcatggacaaatgaccacgagccgccagcagatgtt
ttagattacagtgacgatgagaaggaaagagaagcaaaacagaagaaaaaagggaataat
ttggcaaagaagaaaatccagtccgaccaggatgaaaattcgagcagtgtccatgaacag
aaccgaaattacagggggcagaatgtttcaaggccaccatcaagacataattatggacca
cgattctctagaggtagagctgcacaactacataacaatgcctttggacagcatcctaga
acatatttccaacctggctttcctagtccgcatatgatgaatcaaccctatcccttccac
agcatgcaagctcaagaatattcttcagcattaccaagtaatggacacggtactcctgtt
tcacattactacagttctccttatggacatgtgcatccatactctctcccacctccacca
ccacctcccccagatatgatttggtcagaacaaaacaatcctcttcattttatgcagaat
tcacaattttacacttctccaccaccaccaccaccaccaccacctcttggaaaccctaac
cagtcctcatttgatcctaattataattga
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