Xenopus laevis (African clawed frog): 108699240
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Entry
108699240 CDS
T01010
Symbol
npas3.L
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108699240 (npas3.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108699240 (npas3.L)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
108699240
NCBI-ProteinID:
XP_018086688
Xenbase:
XB-GENE-17345769
UniProt:
A0A8J0TMY8
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Position
8L:106281381..106576502
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AA seq
956 aa
AA seq
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MIRIFPDFSVQVTAAPGTGGAPPDPGAARSGGANGNHQHNVPGVSSYQQRGASRPISACP
APCPPDLNLSLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPGAITSQLDKASIIRLT
ISYLKMRDFANQGDPPWNLRIEGPPPNTSVKVIGSQRRRSPSSVATDVFESHLGSHILQS
LDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSMFDYVHPGDHVEMAEQLGMKLPPG
RGLLSQSANDDGASSASSSSQSETPEPVESTSPGILPQDNSLERSFFIRMKSTLTKRGVH
IKSSGYKVIHVTGRLRLRVSLSHGRSGAGQVMGLVVVAHALPPPTINEVRIDCQMFVTRV
NMDLNIIYCENRISDYMDLNAVDLMGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYR
WMQKNGGYIWVQSCATISINAKNANERNIIWVNYILSLQEYKDIPMDIAQLPHLPEKTSE
SSETSDSDSDSKDNSEDNENPKSDGKGNLSEQSEDPEPDHKQPGAHSDPEMNCDEEGNSS
SDACSEESEESEDCELRKAEVVMEQGGLSALGGIGALDTLGPMHIKVERYAESEADMRGP
DSLSSDSAKDSESVEEDEDDDGIQVAGVLSRHQRRKRRRRNRTGPCGGRRRRLSGGCSPG
GIESSLGDPPRLLPSTPPPTGGCSSSSVLKIKTEMAEPINFDNDSSIWNFPPNREISRNE
SPYSMTKPPTGGEHFSPSPSSSTAPQALHVSIPDSVLTPPGGTESAGRSKLQFAGSSAGL
ATVGSDPLSPPLSASPREKPPQTSGPSNSLLYAGELEALQRLQAGNVVLPLVHRVAGTLA
ATGSSGQRVYTTGTIRYAPAEVTLGNLLPNTHPVNFVDVNGPGFGLDPKTPMEMLYHHVH
RLNMSGPFGGAVSGAGLTQVPAASVFTTAEGIFSSLPFPVYSNGIHAAQTLERKED
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggacttcagcgtgcaggtgacggcggctccggggactggcggg
gctcctcccgatcccggggcggccagaagcggtggagctaacgggaaccaccagcataat
gtgcccggggtcagctcctaccaacagcggggagcctccagacctatcagcgcatgtccc
gccccctgtcctccagatctcaacctaagtttacaagctctgcgaaaagaaaagtcgagg
gacgcggctcgctctcgacgtgggaaggagaactttgagttttacgagctggccaaactt
ctcccgctccctggagccatcaccagtcagcttgataaggcatccatcatcaggctgacc
atcagctacctgaagatgagagactttgccaaccagggtgacccaccctggaacctacgt
atagaaggtcctccaccgaacacctctgttaaagttatagggtcccagcggcggaggagt
cccagctctgtggcgactgatgtttttgaatctcatctgggaagtcacattctccagtct
ctggacggatttgtatttgcactaaaccaagaaggaaagtttttgtacatttcggagact
gtgtccatctaccttggcttgtctcaggtggaactgacgggaagcagtatgtttgactat
gtgcacccaggggaccacgtagagatggcagagcagcttggcatgaaacttccccctggg
cgagggcttctatcccagagtgccaatgatgatggagccagttcagcatcctcatcttcg
cagtcagagacccctgagccggtggagtccaccagtcccgggattctccctcaggataat
tctttggaacgctccttttttatcaggatgaaatccaccctgaccaagagaggggtgcac
atcaaatcctcggggtacaaggttatccacgtcactgggcgacttcgtctccgcgtgtcc
ctatcccatggacgttcaggggccgggcaagtgatgggtcttgtggtggtggctcatgcc
ctccctcccccaaccatcaatgaagttcgaatcgactgccaaatgtttgtaactcgtgtc
aacatggacctcaatattatatactgtgaaaataggatcagtgattacatggacctcaat
gctgtggatctgatgggtaaaagatgctatcactttatccatgccgaggatgtggagggc
atcaggcacagccatcttgacttgttaaacaaggggcagtgcgtcaccaagtattaccgc
tggatgcagaagaacgggggctatatctgggtccagtcctgtgccactatctctataaat
gccaagaatgccaatgagagaaacatcatctgggtcaactatattcttagtttgcaagaa
tacaaggacatccccatggatatcgcccagcttccgcacttacctgagaagacatcagaa
tcctctgagacatctgactctgattcggactccaaggataattcagaagacaatgaaaat
ccaaagtcagatggaaagggaaatctctcagaacagagcgaagatccagaaccagaccac
aagcagccgggggcccattctgatccagagatgaactgtgatgaagaaggaaacagttct
agtgatgcctgcagtgaggaaagtgaagaaagtgaagactgtgaattgaggaaagcagag
gtggtgatggagcaaggggggctgagtgctctgggaggtattggtgccctggatacgtta
ggcccaatgcacataaaggtggagcgttacgcagagagtgaggcagatatgcgagggccg
gattctttgagctcagacagtgccaaggactcagagagtgtagaagaagacgaagatgat
gatggaatccaagtagcaggggttctaagccgtcaccagaggaggaaaagaaggagaaga
aacaggacaggaccatgtggaggacgcaggagaagattgtcaggaggatgtagcccaggt
ggcatagagagctcactgggggaccctcctagacttctcccctccacccctcctcccaca
ggaggctgctcctcttcctctgtacttaagatcaaaacagaaatggcagagcccatcaac
tttgacaatgacagtagcatctggaactttcctccaaacagggaaatctcccgtaatgag
tctccctacagtatgaccaagcctcccacaggaggtgagcacttctccccctccccgtcc
tcctcaactgccccccaagcccttcatgtttccattccagactctgtcctcacgccccca
ggtgggacagaaagtgctggacgcagcaaactgcaatttgctggatcctcagcaggtttg
gctactgtcggttcagaccccctttcccctcccctctccgcttcaccccgggaaaagcca
ccacagaccagtggcccatctaactctcttctgtacgcaggggagctggaagctctgcag
aggcttcaggctggaaatgtggttttgccccttgtgcatcgtgtggcagggacattagca
gccactggaagtagtgggcagagggtatataccacaggcaccattcgttatgcccctgca
gaggtaacactgggcaacctccttccaaacactcaccctgtgaactttgtagatgtgaat
ggcccaggatttggactggaccccaaaaccccaatggagatgctctaccaccatgtccac
cggttaaatatgtctggcccgtttggaggagctgtgtcaggagctgggcttacccaagtg
ccagctgctagtgtcttcacaacagcagagggaatcttctcatctctccccttcccagtg
tacagcaatggcatccatgcagcacagactctagaacggaaagaggactga
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