Xenopus laevis (African clawed frog): 108699428
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Entry
108699428 CDS
T01010
Symbol
ncstn.L
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108699428 (ncstn.L)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
DUF6396
Motif
Other DBs
NCBI-GeneID:
108699428
NCBI-ProteinID:
XP_018086994
Xenbase:
XB-GENE-6486551
UniProt:
A0A1L8FCM9
A0A974CAG6
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Position
8L:complement(127480275..127493939)
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AA seq
713 aa
AA seq
DB search
MAVPAACCVRRMGDAYRVWRCLGLVAALLAVVCRGNSVERKIYISLNSTSPCVRLLNATH
QVGCQSSKSGDTGVIHVVEQEEELQWVLESGPNPPYMVVLEAHLFTRESMQKLKGSSRVS
GVAVILSKTSPASGFSPDPPCPNDGFGLYTSDHGSQYAHCNNITWNPLGTGLSYEEFQFP
IFLLREENETEVIRQCYRDHNMPQNGSAPQYPLCAMQLSSFMYGVTNTVTCMRRNSLQSS
FSISAEGVCDSIIVHNVWSSLRPINTTGTIPPEEQLVVAAARADGHSFFWNLAPGADSAV
SGFVTLLAAAEALHKLNDTQDLPRNIMFVLFQGEIYDYIGSSRMVYDMEKGHFPVSLGNI
HSFVELNQVALRNDSYLWIHTDPISKNNETVNATVQEVVDSLVSASHGSNVTVQEVDHSQ
PLPPASLQRFLRARNIPGVVLTDHRAAYSNRYYHSVYDTADNIHMRYPEGLTKEEQLQYI
TDTARSLADVATVLANSLYRLAGGKSTAEIKADPKTVTQMLYGFLKMSNNSWFQSIIKAE
WRSALDNGPLQYYMTGTIKSNLREPNHPASLLLSVLANLTGTVMNLTNDECQNPEKIDDP
KKELYSYTWVQGPLDGNTTSRRPYCVRSSIRSHVAESPAFELDQWDSTEYSTWTESRWKD
IKARIFLVPSRELEVITLVVGIAVLLVSLVTTYFINAKAAILFTNSQDSEVAY
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcccggctgcttgttgtgtgaggaggatgggcgatgcttatcgggtgtggagg
tgcttgggacttgtcgcggctctgctggccgttgtgtgcagggggaattcagtggagagg
aagatctacatctcgctgaacagcacctcgccttgcgtccgactgctaaatgccacccac
caggtgggctgccagtcttctaagagcggtgacaccggggtgatccatgtggtggagcaa
gaggaggagcttcagtgggtgctggagagcggccctaatcccccctacatggtggtgttg
gaagcccatctctttaccagggaaagcatgcagaaattaaaggggagctcacgtgtgtct
ggtgttgcagttatcctttccaaaacaagtcctgcttctggattctcccccgatcccccg
tgtccaaatgatggttttgggttgtacaccagtgaccatggctcccagtatgcccactgc
aacaatatcacatggaacccgcttgggactgggctttcctatgaagaattccagttcccg
attttcctgctccgtgaagaaaatgaaaccgaggtcataaggcagtgttacagagatcac
aacatgcctcagaacgggagcgccccccagtaccccctctgtgccatgcagctttcctcg
tttatgtacggagtcaccaacacggtcacctgcatgcggcgcaactccctccagtcatcg
tttagcataagcgctgaaggagtgtgcgattcgatcattgtgcacaacgtgtggagctcc
ctgaggcccatcaatacgaccggcacaatcccgccggaggagcagctagtagtggctgcc
gcaagagctgacggtcactccttcttttggaatctggctccgggggcagacagcgcagtg
tcggggtttgtgacccttctggctgcggcggaagctcttcacaaactaaacgacactcag
gatttgccacggaatataatgttcgtcctttttcaaggggaaatctacgactatattggc
agttccaggatggtgtatgacatggaaaaaggccacttccctgtctcactggggaacatc
cattcatttgttgaactgaaccaggtggcgctgagaaatgactcctacttgtggattcac
accgatcccatctccaagaataacgagaccgtgaatgcgacggtacaagaggtggtcgac
tcgctagtgagtgcaagtcatggttccaatgtgacggtacaagaagttgaccactcgcag
cccctccctcctgcttccttgcagcgattccttagggcgcggaacatccccggagttgta
cttaccgatcacagagctgcttacagcaacagatattatcacagcgtatacgacacagct
gataacatccacatgagatatccagaagggctgaccaaagaagaacagctgcaatatatc
accgatacggctcggtctcttgcagatgttgccaccgtgcttgccaactctctgtacagg
ctggctggagggaagagcacagcggaaataaaggccgaccccaaaaccgtcacacagatg
ttatacggcttcttaaagatgtccaacaacagctggttccagtccatcatcaaagcagaa
tggagaagtgctctggataacgggccgttgcagtattatatgacgggcacaataaagagt
aacttgagggaacccaatcatcccgccagcctcctgctctctgtgttggccaacctcact
ggaacggtgatgaacctgacgaatgacgaatgtcagaacccagagaagattgacgatccc
aagaaagaattgtacagttacacttgggtgcagggccctttagatggtaacacaacatcc
agacggccatattgtgtgaggagctccattcgtagtcacgtggcagagtctccagccttc
gagttggaccaatgggattccactgaatactccacttggacagagagtcgttggaaggat
atcaaggcccgcattttcttggtgcccagtcgtgagctggaggtgatcaccttggtggtt
ggcatcgccgtgcttctcgtttctctggtcaccacttactttatcaacgccaaggccgcc
atattgttcacaaacagccaggacagtgaagtggcctattaa
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