Xenopus laevis (African clawed frog): 108699890
Help
Entry
108699890 CDS
T01010
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108699890
04020 Calcium signaling pathway
108699890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108699890
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108699890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
108699890
NCBI-ProteinID:
XP_041430596
UniProt:
A0A8J1LN28
LinkDB
All DBs
Position
8S:27886908..27982940
Genome browser
AA seq
2241 aa
AA seq
DB search
MILATIIANCIVLALEQHLPEQDKTDMSGRLEDTEPYFIGIFCFEAGIKIIALGFVFHKD
SYLRNGWNVMDFVVVLTGILATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAIVMFAIIGLEFYMGKFHKACFSDDSDEPVGDFPCGEELPARLCENG
TSCRVYWKGPNFGITNFDNILFAVLTVFQCITMEGWTDILYNTNDAVGNMWNWLYFIPLI
IVGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVML
AEEDKNAEEKSPLDVLKRATIKKSKNDLIHAEEGDDHFNDICSVGSPFARSSLKSAKNES
SSYIRRKEKMFRFFIRRMVKAQSFYWFVLCVVALNTLCVAIVHYNQPQWLTEALYYAEFV
FLGLFLTEMSMKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRAL
RLLRIFKVTKYWNSLRNLVVSLLNSMKSIVSLLFLLFLFIVVFALLGMQLFGGQFYFEEE
TRNTNFDTFPTAILTVFQILTGEDWNLVMYFGIESQGGVSKGMFSCIYFIILTLFGNYTL
LNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSATNLSITAFVKQ
TQGAISRSSSVSNINSPKQQNSTKCRSVWEQRTSQIRKHNFRASCEALYSELEPEEQLRY
ATTLHLRPDMKSHMDRPLLVEPQDSTDTKDGSPDPPAPNEIEPVPSVTTEPSRKQHRHHD
RVGGEHNEGGRENCNHNGDSSNDREERQRQHRSRSKEGEGGKETGRGERNHSQERGKRHH
RRASPEDGTEREHRRHRTHRHSADRQVKEGNGQPLSGGKGERKSRHRDGGSRSGNREVDE
TNRGTGENGDEPPRSRHRNRHKALSTYDTEDKNENKEVDSAEKEHRNHRPRENHNESELP
PGGLQQLTEQPEDADNQKNVNRMALPHPDRSSTINIPVTITAPPADSAVIPINNMDFDGK
SEEKKEMEDDLTKNGPKQILPYSSMFIFSTTNPVRRLCHYIVSLRYFEMVILVVIALSSI
ALAAEDPVQADAPRNDVLKYMDYIFTGVFTFEMVIKMIDLGLLLHSGSYFRDLWNILDFI
VVSGALVAFAFSSFVGGNKGKDLNTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKN
VLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKDLEKDCRGEYLNYENNDLRAQAREW
KKYDFHYDNVLWALLTLFTVSTGEGWPNVLKHSVDATYEDQGPNPGFRMEISIFYVVYFV
VFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFVISAKPLTRYMPQNRQSFQ
YKMWRFVVSPPFEYFIMVMIALNTIVLMMKFYGAPQTYEDMLKCLNIIFTSMFSLECILK
IIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAENFINLSFLRLFRAARLIKLLRQGY
TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALSDDNSINRHNNFRTFFQ
ALMLLFRSATGEGWHEIMLSCLSHQPCDPRSGNTKDECGSDFAYFYFVSFIFLCSFLMLN
LFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIGYTDMYEMLRHMPPPLG
LGKKCPARVAYKRLVRMNMPISDTDLTVHFTSTLMALIRTALDVKLASGGIKQHESDAEL
RKEILSVWPNLSQKTLDLLVPPHKPDALTVGKVYAALMIFDFYKQNKNSRDQSHPQSGVL
SQTGTVSFFQPLKATLEPFGNSKMFIHQKSSASLNNGGVMPDQDTGIRESSSWGTQPATD
PFSTPRSTAFQRGHSEEIHAQRNGKQSVEMKQIGQTLSNGGEHSTGLQSQGRAVSMPRLA
AETHPRSCAPSPGNGFLPSIPDSSLMKRSVSTLTPPQRAQLYEYSLERVPPEQTHQHHHR
CHRRKERKQKSTERSPQSEDADAPTRERKHERGRSQERKQQPPSSLEKQRFYSCDRYGSR
DSGHPRHCDHSRAPSPSAIQEHSTHRQGSGSAIGSPRLTSSGASTPCRGMRRQLPQTPLT
PRPSVTYRTAHSSPVHFGGPAYSPGRLSRGLSEHNNLLYSDSPSHSACTVTRIGSDPYLG
PRQDSDSYCPLSEETLTFEEALASNSGRSSRTSYVSSLTSHSHQLCRVPNGYHYTLGLST
GPATAPRGRSYYNEADEDDWC
NT seq
6726 nt
NT seq
+upstream
nt +downstream
nt
atgattttagcaacaatcattgccaactgcattgtgttggctttggaacagcaccttccg
gaacaagacaagacagacatgtctgggagactggaagacacagagccatactttattgga
atattctgttttgaagccggtatcaaaattatcgccttggggtttgttttccataaagac
tcctaccttcggaatggctggaatgttatggactttgtggtagtgctgactgggattctg
gcgacggccgggacagactttgacctgcggacgctgcgggcggttcgagtgctgagacct
ctaaagctggtgtctggaattccaagcctgcaggtggtattgaagtccatcatgaaggcg
atggttcccttactccaaatcggtttactcctcttcttcgctattgtcatgttcgctatt
attggcttggagttttatatgggcaagttccacaaggcctgcttttctgatgactcagat
gagcctgtaggagatttcccctgtggggaagaacttccagcccgactctgtgaaaacggg
acctcctgtcgggtttattggaaggggccaaatttcggaatcaccaactttgataacatc
ctgttcgctgttctgaccgttttccagtgcatcactatggagggatggacagacatcctg
tacaacacaaacgatgctgtgggtaacatgtggaactggctctattttatcccactcata
attgtcggctctttcttcatgctgaacctggttctgggtgtcctctcaggggaatttgct
aaggaacgagagcgagtagaaaatcgacgtgccttccttaaactccgacggcagcagcaa
attgaacgtgaattgaatggctacctggagtggatcttcaaagctgaggaagtcatgttg
gctgaggaggataagaatgcagaggagaagtcccccttagatgtactcaagagggcaacc
attaagaaaagcaaaaatgaccttatccacgctgaggagggggacgaccatttcaatgac
atctgctctgtggggtcacccttcgcccgttcaagcctgaaaagtgcaaagaatgagagt
tcttcatacattcgcagaaaagaaaagatgttcaggttctttatccgccgcatggtgaaa
gctcagagtttctattggtttgtcctctgcgtggtggcgcttaacactctctgcgtggcc
atagtacactacaaccaacctcagtggctcactgaagccttgtattatgcagagtttgtg
ttcctgggacttttcttgacagaaatgtccatgaagatgtatggcctgggaccccgcaat
tacttccactcatccttcaactgctttgattttggagttatagtgggaagtatttttgag
gtcatatgggctgcggtgaaaccaggtacctcctttggcataagtgtccttagagctctg
cgacttcttcgcatctttaaggtgaccaagtactggaactccttaagaaatctggtggtg
tctcttctcaactctatgaagtccatcgtcagcctacttttccttctgttcctctttatc
gtggtgtttgctctgcttgggatgcagctatttggtggacagttttattttgaagaggaa
acacggaacacaaattttgacaccttccctaccgcaatccttactgtgtttcagattttg
acaggagaagactggaatcttgtcatgtattttggcattgagtcgcagggcggcgtcagt
aaaggaatgttctcgtgcatctatttcatcattctgacactgtttggaaactataccctt
ctaaatgtcttcttggccattgctgtggacaacttagcaaatgctcaagagctaaccaag
gatgaagaagaaatggaagaagccaccaaccagaagctggctctacaaaaagccaaagaa
gtcgcagaagtcagccccatgtctgcaaccaacttgtccatcacagcttttgtaaagcaa
actcaaggtgcaatatctcggagctcgtccgtctccaacataaattcacccaaacagcag
aattctaccaagtgtcgctctgtatgggaacagcgaaccagccagattcgaaagcacaac
ttccgtgcaagctgtgaggccctctacagtgagttggaacctgaggaacagctgcgttat
gccaccaccctacacctaaggcctgatatgaagagccatatggatcggccacttttggta
gagccacaggactcaactgacacaaaagatggtagcccagatcccccagctcccaatgaa
atagaaccagttcctagtgtgaccactgagccctcacgtaaacagcaccggcaccatgat
cgagtaggtggagaacacaatgaaggagggagagaaaattgtaatcacaatggagattca
agtaatgacagagaggaacgtcaacgtcaacataggagtcgcagcaaggaaggtgaggga
ggtaaggaaacaggaaggggagagaggaaccacagtcaggaaagggggaagcgacaccat
agaagggcttctcctgaggatgggacagagagagagcatcgacgacatcgtacccatcgc
cattcagcagataggcaagtcaaagaaggcaatggccagccactctctgggggtaagggt
gaaagaaaatcccggcacagagatggtggttcaagatctggaaacagagaggtggatgaa
actaacagaggaactggggaaaatggagatgaaccaccaaggtcacggcatcgcaatagg
cataaagcactctctacgtatgacacagaagataagaatgagaacaaagaggttgattca
gcagaaaaagagcaccgcaatcataggccaagggaaaaccataatgagtcggagcttcca
cctggcgggttgcagcagttgactgagcagccagaagatgcagataaccagaagaatgtc
aaccgcatggcactgccccatccagacagaagcagcaccatcaatattccagtgaccatc
acagcgccacctgcagacagtgccgtcattccaatcaataatatggatttcgatggaaag
tctgaggagaagaaggagatggaagatgacctgaccaagaatggtcccaaacagatcttg
ccatacagttccatgttcatctttagtaccactaatccagtccgccgtctatgccattac
attgtcagccttcggtactttgagatggtcatcctggtagtgattgcactgagcagcatt
gccctggccgcagaagatcctgtgcaggctgacgcaccccgcaatgatgttctaaaatac
atggattatatatttactggagtcttcacctttgagatggttattaagatgattgacctt
gggctgctgcttcactcgggatcctattttcgagatctgtggaacattttggatttcatt
gtggttagcggtgccctggtggcctttgcattctcgagttttgttggaggtaacaaagga
aaagacctgaacaccatcaagtctttgagggttttgcgtgttttaagaccactgaaaacc
atcaagcgccttcccaagctcaaggcggtatttgactgtgtggtgaactctctgaagaac
gtcctgaacattctgatagtttacatgctcttcatgtttatctttgctgtcgtcgcagtt
cagctcttcaagggcaagttcttctactgcacagatgagtctaaagatttggagaaggat
tgcagaggtgaatatttgaattatgaaaataatgatttgagggctcaggcaagagagtgg
aagaaatatgattttcactatgacaatgtactatgggcattgcttaccctgttcacggtc
tctactggagaaggttggccaaatgtcctcaaacattcagtagatgccacctatgaggat
cagggtccaaatcctggtttcaggatggagatatcgatcttctacgtggtttattttgtg
gtgttcccatttttctttgtcaacatttttgtggctctgattatcatcacctttcaggag
caaggggataaggtcatgtcggagtgtagccttgaaaagaacgagagagcctgcatagac
tttgtcatcagtgccaagcctctcactcgatatatgcctcagaaccgtcaatcctttcag
tacaagatgtggcgattcgttgtgtcccctccatttgaatactttatcatggtgatgatt
gctctcaacaccattgtgctcatgatgaagttttatggggccccacaaacttatgaagac
atgttgaaatgcttgaatattatcttcacctcgatgttctcgctggaatgtatcttaaag
ataattgcctttggggtactgaattatttcagagacgcctggaatgtgtttgactttgtc
acagtgctgggaagtatcactgatattttagttacagagattgcggaaaacttcatcaac
ttgagcttcctgcggcttttccgagctgcccgactgatcaaattgttacgccaaggttac
accatacgaatccttctctggaccttcgtgcagtcttttaaggccttgccatatgtctgc
ctcctaattgccatgttgttcttcatctacgccattatcggcatgcaggtgtttggaaac
attgcattgtcggatgataactccataaacagacacaacaacttccgcaccttctttcaa
gctctaatgctcctgttcaggagtgccactggtgagggctggcatgaaatcatgctgtct
tgcctcagtcaccaaccctgcgatcctcgatctggcaacaccaaagatgaatgtggcagt
gactttgcatatttttattttgtctctttcatcttcctgtgctctttcctgatgctgaat
ctttttgttgctgtcattatggataatttcgagtatctgacaagagactcttccatcctg
ggaccacatcatcttgatgagtttatcagagtctgggcagagtatgatccggctgcttgt
gggcgcattggttacactgacatgtacgagatgctgcgacatatgccccctccccttggt
ctggggaagaaatgccctgcacgtgtggcatataagcgtctcgtaaggatgaatatgcct
atctctgatacagacctgactgttcatttcacctccaccttgatggctttgatccgaact
gctctagatgttaaactggcttcaggtggaattaaacaacatgaatctgatgctgagctg
aggaaagaaatcttatctgtgtggcccaacctctcccagaaaactctggatcttcttgta
ccacctcataagccagatgcgctgactgttggaaaggtctatgccgctctaatgatcttt
gacttctacaagcagaataagaacagccgtgatcagtctcacccacagtctggggtcctt
tcccagactggtacagtctcctttttccagccattgaaggctactttagaaccatttgga
aattccaaaatgtttatccatcagaagagctcggcttctctaaacaatgggggtgtgatg
cctgatcaagatacaggtattcgagaatcaagttcttggggcactcaacctgctacagat
cccttttctactccaaggagcactgcattccagagagggcactcagaggagatccatgca
caaagaaatggcaaacagtctgtagagatgaagcaaattggacagacgttgtctaatgga
ggggaacactctacgggcctgcagtctcagggtcgtgcagtttccatgccacggctagca
gctgaaacccacccgagaagctgcgctccttcccctggaaatggtttcctgccctcaatt
cctgattccagtctgatgaagcggtctgtttctaccctgacgccgccacagcgagcccag
ctgtacgaatactctctagaaagggtcccacctgagcaaactcatcaacaccatcaccga
tgccaccggcgaaaggagagaaagcaaaagtctacagagagatcaccgcaaagcgaggat
gcagatgcccccaccagggagagaaaacatgaaagaggacgatcccaagaaaggaaacag
cagcctccatcttcattggagaaacagcgattctactcctgtgaccgatatggaagccgc
gactctggccaccctcgtcactgtgatcacagccgggcaccatcgcctagtgcaatacaa
gaacacagcacacacagacagggcagtggttctgccatcggaagtccacgactcacaagt
tccggtgctagcaccccatgccgggggatgcggagacaactccctcagactcctcttacc
cctcggcccagtgttacataccggacagctcactcctctcctgtgcactttggagggcct
gcttattccccggggcgtcttagtcggggtttatcagagcacaacaatctactatatagc
gattcccccagccactcagcctgcacagttactcgaattgggtccgacccctacttaggg
ccacgccaggatagcgacagttactgtcctttgtcagaggagacattaaccttcgaggaa
gccttggccagcaattctggacgttcatcccggacttcctatgtgtcttctctgacctca
cattcacaccagctctgcagggtaccaaatggttaccactacaccctggggcttagcacc
gggcctgccacagctccaagaggccgcagctactacaatgaagcagatgaggatgactgg
tgctag
DBGET
integrated database retrieval system
