Xenopus laevis (African clawed frog): 108699932
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Entry
108699932 CDS
T01010
Symbol
tsc1.S
Name
(RefSeq) hamartin isoform X1
KO
K07206
tuberous sclerosis 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04140
Autophagy - animal
xla04150
mTOR signaling pathway
xla04218
Cellular senescence
xla04910
Insulin signaling pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108699932 (tsc1.S)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108699932 (tsc1.S)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
DUF6051
Motif
Other DBs
NCBI-GeneID:
108699932
NCBI-ProteinID:
XP_018088119
Xenbase:
XB-GENE-6488161
UniProt:
A0A8J0TG50
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Position
8S:31737058..31772362
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AA seq
1111 aa
AA seq
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MAQQTTVWEHLYLLESSDLQQLDQIHTLIRDHLIADRSPILVNNLVDHYVESGSEQAMLI
LSMVQEPHDKHLLDKINEYLVKAASRLPTLTLLGHVIRRQPSWKHKLSQAPVLQSLLKCL
KVDNDVVVLTTGVLVLITVLPMIPQSGKQHLYEFFDIFGRLATWCLKNPGRVAEMCLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLETFEEIVKPMMEHVRIHPELVTGSKDH
ELDPSRWKRLETHDIVVECAKISLDPSEASYEEGYSPLSNRLRQRQHDTTSSPYTEIRGS
NASTPRTCTQSAPPHTASIELLQDSIWSPSTICGMTTPPNSPANVLVDASHASSRPPSKV
LYTPGGKATPLGTPATSPPPTSNSEECTPASGASLTPHKKNESSDPGRPATNRQLLSKGE
KSTDESPKTQKTVYLSELPDIISDFAADHNSTEEELKKNGHAAICQELSRITMPDPEPTV
LRGGFDSPFSLRCDSQPGSQKKLASYSFGLIPEPSATDKLHYSVSHDNSKQAFTPIEPPN
GNENATDSGKPPSNNSLPSTADIFSPQVQRNVSCFSLAPYEHLFELALPKTANLFLCNKT
EELCRRGKGSLEEGEEGAFSISPAEVLDRLIQLGADAHTKELSNRLSLPSKAADWTHFGG
SPPTDEIHVLRNQLVLLHNQLLYERFKRQQHAQRNRRLLRKVIKVTSLEEQNAAMKKQLK
LQEVDMHSIKQSLFQEQTRYRRLQEERDTVVTQLRSQIRQLQHDRDLFYNQSQELQTKLE
DCRTTIADLRLEVKQANNKVCHTELRLSQVSQKLSNSESVQHQMEFLNRQLLVLGEVNEL
YVEQLQQKQTNSTKEVEMLQTSFKKDLEKARLNVVQLSQRLECTQKRIVELEAQLAKKES
LFQEQKKFLEHVKGKSRGQLQAAESRYLAQKRISQVFEVKILSLYNRLEKEGPLKSQSEE
KAETAEAAEERCDINIASVYSPDVGILEEVNGSEYNLPANRTSSSSSQSSSTLSTPEKGT
NLQLSRRQLLEIPSSGHLTIGSYPNAKSFLGIRARELFRNKSESHCDEESISSLSEILKT
ELCQELIPETNAEGSPQNQDCVRNLQIMDYD
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcaaaccactgtgtgggagcatctgtatctgctggaatcttcagacctgcag
caactggatcagatccatacacttatcagagaccaccttatcgcagatcgctcccccatt
ctggtcaacaacctggtggatcattatgtggaaagtggttcggaacaagcaatgctgatc
ctttcaatggtacaagaacctcacgacaagcaccttttggacaagataaatgagtattta
gttaaagctgctagccgcttaccaacgctaacactattaggccatgtgatccgtcgccag
ccatcttggaagcacaaactctcccaagcacccgtccttcagtccttactcaagtgtctc
aaggtagataatgatgttgtcgtcctcaccacgggagtcctagttttaattactgtgctg
ccaatgattccgcagtctggcaaacagcatctctacgagttctttgacatatttggacgc
ctggcaacatggtgcctaaagaaccctggtcgtgtagcagagatgtgtctcgtccatctt
cacgccagcgtgtatgccctgttccatcggctttatgggatgtatccatgcaattttgta
tcgttcctgcgctcccattacagtatgaaggaaaacctggagacctttgaggaaatagtc
aagccaatgatggagcatgtgcggattcacccagagcttgtaactggctcaaaagaccat
gaactggacccaagcaggtggaagaggttggaaacacatgacattgttgtagaatgtgcc
aaaatatctctggaccccagtgaagcttcctatgaagaaggatattcccccctttccaat
cgcctgaggcagaggcaacatgacaccacatccagcccctatactgaaatcagaggaagc
aatgcctccactcctcgaacatgtacgcagagtgcaccacctcacactgcaagcattgag
ctactgcaggacagcatctggagtccgtccaccatttgtggaatgaccaccccgcctaac
tcgcctgccaatgtgcttgtagatgcatctcatgcctcctctcgtccccctagcaaagtt
ctgtacacgcctggaggcaaagcaacacctctgggaacaccagcaacctccccacctcca
accagcaactctgaggaatgtaccccagcctccggtgcttcactgacaccccataagaag
aatgaatcctctgatccaggaaggcctgcaacaaacaggcagctgctcagcaaaggagaa
aaaagcactgacgaatcaccaaagacacagaagactgtgtatttaagtgagcttccggat
atcattagtgattttgcggctgaccacaatagcactgaggaagaactgaagaaaaatggt
cacgctgctatatgccaggagctatctcggatcaccatgcctgaccccgagcctactgtg
ctaagaggaggatttgattcccctttctctcttcgctgtgacagtcagcccggctctcag
aaaaagcttgcctcctatagctttggcctcatccccgaaccatctgccaccgacaagctc
cactacagtgtgtcccatgacaactccaaacaggcgttcactcccattgaaccacccaat
ggcaatgaaaatgcaactgactcagggaagccgccatctaacaactctttgcccagcact
gctgatatcttctcacctcaggttcaaagaaacgtatcctgtttcagcttggctccatac
gagcatctctttgaactggcgttgcccaaaaccgctaacctttttctctgcaataagaca
gaggagctgtgcagaagaggcaagggaagccttgaggagggtgaagagggtgccttctcc
atttccccagcggaagtgcttgaccgacttatccagttgggagcagatgcccacaccaaa
gagctgagcaacaggttgtctttacccagcaaagccgctgactggacccactttggaggt
tccccaccaacagatgaaatccatgtacttcgcaatcagttggttctgcttcacaaccag
cttttgtatgaaaggttcaaaaggcagcagcatgcccaacgcaaccgccgcctcctgcgc
aaagttatcaaggtgacttcactggaggaacagaatgctgctatgaaaaaacagttaaag
cttcaggaggtggacatgcattctatcaaacagagcctctttcaggaacagacgcggtac
cggcggcttcaggaagagcgagacactgtggtcactcaactgcgcagccagatccgccag
ctacagcatgacagagatctgttctataaccaaagccaggagctgcagaccaagctagag
gattgccgcaccaccattgcagatttacgtctggaggtgaaacaagccaataataaagtg
tgccatacggagctccgtctaagccaggtttctcaaaagctctccaacagtgagtctgta
cagcatcagatggagtttctgaaccgtcagctcctggtcctgggggaggtaaacgagttg
tacgtggagcagttgcagcaaaagcagacaaacagcacaaaggaagtggagatgttgcag
acttcctttaaaaaggacctggagaaggctcgattgaatgttgtgcaactgagtcagagg
ctagagtgcacccagaaacgaatagtggagctggaagctcagctggccaagaaagaatcc
ttgtttcaagaacagaaaaaattcttagagcatgttaaggggaagagcagaggccagctg
caagcagccgagagcagatacctcgctcagaagaggataagccaggtcttcgaagtcaaa
atcctcagtctgtacaacaggttggagaaggaagggcctctgaaaagtcaaagtgaagag
aaagcggagaccgcagaagccgcagaagaaaggtgtgacattaacattgcaagtgtttac
agtccagatgttggcattctagaagaagtcaatggtagcgaatataacttgcctgccaac
cgcacaagctcctccagtagccagagcagcagcaccctctccaccccagagaaaggcaca
aacttacagctcagccgtcggcagttactagagatcccttccagcggccacttgactatc
ggctcctaccccaacgccaaaagtttcctaggcatccgggcccgcgagctgttccgcaac
aagagcgagagccactgcgacgaggaaagcatcagcagcctctcggagattctgaaaact
gaactctgccaggagcttatcccagagacgaatgcggagggctccccccaaaatcaagat
tgtgtgaggaatcttcagattatggactatgactaa
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