Xenopus laevis (African clawed frog): 108699934
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Entry
108699934 CDS
T01010
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
108699934
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
108699934
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
108699934
NCBI-ProteinID:
XP_041430959
UniProt:
A0A1L8F1B6
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All DBs
Position
8S:32023506..32038351
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AA seq
1011 aa
AA seq
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MEEAAQMSHQLSSGYPSQDFYDHPEKLKNKKKGKKHSKVAAENTCIDAEVAGSENVSSTP
HKRKNKNKNPVDSGLDYYSALTGTSDGDPNVSLHGLEKSAKKKHFRHRDLSPSVLVPASP
SDFGDVSSQERTDLEDLLPVKKKKKHRHQTVSQEESSYQAISSYTGDTLIPMQSELEDPL
KPKKKKKKHEYQDRSHNKDGLSEECDSPDTHRKSKKKKHDKYTEETTAMAGQVEISNMED
ERETLEMAVKKKKKKVREGNSSTSVLMDTGDTTLAEQTDPEKPPMFKKKKKKHTHKMLDD
ENTPQSTGMISTASAASTPKRKRGQEQSDEIMESNMVEPNGDTVLTKEITHTLSKRKKKI
STDTTYSYHGLSMEPEKSLDSLETPPRKKKKHSEHKDSSSGILSSFSYAGGTSIVEQTDS
EDPQAFQEKKKKKHRDRSKMLEEKGLLMELSDHDVPIVAKKKKKKNHEYTVLLNERNDKS
GNLVGDNLKKQLEQECSADLREYAEPEPCGLTLSVSKKKSKKHKRSEMEREDQRLVESHS
INDEIEEPQEENFSTPSSTERRESMMESQENPSETEHESQPVCNTDEGIGDQGTNATDSR
IDSAVEAVLEIKRQRKVRSYPLLRQKDLELLKEYFPYLEKRKYSTIECIVREDLERVRAA
KMKGIPFMTGRFTTEENQRLEQNVMEFQALTGISSGDKLFNSFKYPEEKAMIERVKRMFY
FRRRIAEGIPRTTSEVCIRGAKMFDFTSTKGLYSKDEVEQLKRHIEVHGNKWKKIAPLMG
RNNVTLQLKASQLRRETNSGTWSTVETNKLIDAIKHFVVKPDKGPLDTIPKCDVYTGIPW
VQVEEKVETRNWSQCKIKWSNILLLRMNNGVNVFKGASGAEIKINMIKWLHDHGPAESGQ
IQWEVLADVLGNIPPLLLQNKFVYLKMHYVPDYHSLTHQEILHHLYTETVPQLEENLVPS
ISQQEDDIQPVVEKRDSYLINEIFCEYISKEQEDELYAGKKEETRAKAKMR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggctgcgcaaatgtcacatcaactctcttcaggatatcccagccaagatttt
tatgatcacccagagaaacttaagaacaagaaaaagggcaaaaaacattctaaggtggct
gcagaaaatacctgtattgatgctgaagttgccgggtcagaaaatgtttcttctactccg
cataaaaggaagaataaaaacaaaaatccggtagacagcggcttggactattacagtgca
ttaactggaacctctgacggggacccgaatgtgtcactacatggtctggaaaagtctgca
aagaaaaagcacttcagacaccgtgacctatctccatcagttttagtgcctgcttccccc
tctgactttggggatgtttcaagccaagagaggactgacttggaagatttgcttccagta
aagaagaaaaaaaagcaccgtcatcaaactgtaagccaggaggaaagtagttatcaagca
atttcttcatatacaggggacactttaattcccatgcagagtgaattagaagacccactt
aaaccaaagaagaaaaaaaagaagcatgaatatcaagacaggagccataacaaagatggt
ctttctgaagagtgtgactcacctgatacccacaggaagagcaaaaagaaaaagcatgat
aagtacacagaagagaccacagcaatggcaggtcaagtagaaatatccaacatggaggac
gagagagaaactttagagatggcagtcaaaaagaagaagaagaaagtcagagaagggaat
tcatctacttctgttttaatggacacaggagacaccacccttgctgaacagacggatccc
gagaaacccccaatgtttaaaaaaaagaagaaaaagcacacgcacaaaatgctggatgat
gagaacaccccacagtccactggaatgatcagcacagcctcagcagcctcaacaccaaaa
agaaaaagaggccaagaacaaagcgatgagataatggagagcaatatggtggaaccaaat
ggagacactgtactaaccaaggaaattactcataccctgtccaaacgtaaaaagaaaata
agcacagataccacatattcttaccatggtctctccatggagcctgaaaaatctttggac
agtttggaaactcccccaagaaaaaagaagaaacattcagagcacaaggattctagttct
ggtatattgagttccttctcttatgcaggaggcacatccattgttgagcagactgattca
gaagacccacaagctttccaggagaagaaaaagaaaaaacacagagatcgtagcaaaatg
ctggaagaaaaaggtttgctgatggaactatctgaccatgatgttcccatagtggccaag
aagaagaaaaaaaagaatcatgaatacacagtcctgctcaatgagaggaatgacaaaagt
ggaaacctggttggagataatctgaagaagcaactggagcaggaatgttctgcagatctg
agagaatatgcagagcctgaaccttgtggcttgacattgtcagtgagtaagaagaaatct
aagaagcacaagagatctgaaatggaaagagaagaccagaggttggttgaatcacatagt
attaatgatgaaatagaagagccacaagaagagaacttttccaccccatctagcacggaa
aggagagagagcatgatggaatctcaggagaacccttctgaaactgagcatgagtctcaa
ccagtctgcaacacagatgaaggcataggtgaccaagggaccaatgcaactgatagcagg
attgattcggctgtggaagctgtgctggagattaagagacaaaggaaagtgagatcatat
ccacttctacgccagaaagaccttgaactccttaaggagtatttcccgtacctggaaaaa
cggaaatattccacaattgaatgtatagtgagagaagacttggaaagagtaagggcagcc
aaaatgaaaggtatccccttcatgactggcaggttcactactgaggaaaaccagcggcta
gagcagaacgtaatggagtttcaggctctcacaggaatctcttccggagataagctcttt
aacagctttaaatacccagaagagaaggccatgattgagagagtgaagcggatgttctac
tttaggcgtagaatcgcggaagggataccacgtacaacctcagaggtgtgcatccgagga
gcaaagatgttcgactttacaagtaccaagggactttactcaaaggatgaagtagagcag
ttgaagagacacattgaggtacatggaaataaatggaagaaaatagcacctctgatggga
cgcaataatgttacgcttcagttgaaggcatcacagctgagacgagagaccaacagcggg
acatggagcacagtggaaacaaacaagttgattgatgccattaaacattttgttgtcaaa
ccagacaaagggccactggataccatccctaaatgtgatgtgtacaccggaattccttgg
gttcaagtggaagaaaaagtggagacaagaaattggtcacaatgtaaaataaagtggtca
aatatcctgctactgaggatgaataatggtgtaaatgtttttaaaggagcatctggtgca
gagataaaaatcaacatgatcaaatggttacatgatcatggaccagcagaaagtggtcag
atacaatgggaagtgctggcggacgttcttgggaacatcccaccattgttgcttcagaac
aagtttgtttacttgaaaatgcactacgtccctgactatcatagtctgactcaccaagaa
attttgcatcatctgtacacagaaactgtgccgcagcttgaggaaaacctggttccctcc
atctcacaacaggaggacgatattcagcctgtggttgaaaaaagagattcttatctcatc
aatgaaatattctgtgaatatatcagcaaagaacaagaagacgagctgtatgctggaaaa
aaagaagaaacgagagctaaagcaaaaatgagataa
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