Xenopus laevis (African clawed frog): 108700004
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Entry
108700004 CDS
T01010
Symbol
MGC75872.S
Name
(RefSeq) ras-related protein Rab-7a
KO
K07897
Ras-related protein Rab-7A
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04137
Mitophagy - animal
xla04140
Autophagy - animal
xla04144
Endocytosis
xla04145
Phagosome
xla04148
Efferocytosis
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108700004 (MGC75872.S)
04145 Phagosome
108700004 (MGC75872.S)
04140 Autophagy - animal
108700004 (MGC75872.S)
04137 Mitophagy - animal
108700004 (MGC75872.S)
04148 Efferocytosis
108700004 (MGC75872.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108700004 (MGC75872.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108700004 (MGC75872.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108700004 (MGC75872.S)
04031 GTP-binding proteins [BR:
xla04031
]
108700004 (MGC75872.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
108700004 (MGC75872.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108700004 (MGC75872.S)
Exosomal proteins of other body fluids (saliva and urine)
108700004 (MGC75872.S)
Exosomal proteins of colorectal cancer cells
108700004 (MGC75872.S)
Exosomal proteins of bladder cancer cells
108700004 (MGC75872.S)
GTP-binding proteins [BR:
xla04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
108700004 (MGC75872.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
G-alpha
GTP_EFTU
AAA_29
cobW
AAA_7
RsgA_GTPase
FeoB_N
AAA_16
GIY_YIG_2
DAP3
AAA_22
MCM
AAA_lid_7
CoaE
Ploopntkinase3
Motif
Other DBs
NCBI-GeneID:
108700004
NCBI-ProteinID:
XP_018088317
Xenbase:
XB-GENE-6489283
UniProt:
A0A1L8F1U3
A0A974C3Z9
LinkDB
All DBs
Position
8S:37956658..37975233
Genome browser
AA seq
199 aa
AA seq
DB search
MFHRKHIKLLLIGNAGSGKSALMNQYVNCRFTNYYRATIGADFFTKELRVNDKFVTVQIW
DTAGTERFQSLGAALYRGTDCCLLVFDVTSPKSFHALDNWHREFLVQADPISPGSFLFVV
IGNKTDLQERQVSPREAEEWCKMFSARYFETSAKEASNVEEAFLEAIKLALNYHQEPDQN
WETKVVNLSPPSNSKKCDC
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgttccacaggaagcacatcaagcttcttctcattgggaatgcaggatcaggaaagtcg
gcactgatgaaccagtatgtcaactgtcggtttaccaactactacagagcgactatcggc
gcagatttcttcacgaaggagttacgggttaatgataagtttgtgacagtgcagatatgg
gacacagcgggcacggagcgcttccagtcattgggtgctgctctctatagaggcacagac
tgttgcctgttggtgtttgacgtgacctcccctaaatccttccatgctctggataactgg
cacagagagttcctggtacaagcggatcccatatctcctggaagcttcctgttcgtggtg
atcggtaacaaaacagacctacaggagcggcaggtttcaccacgggaggcagaggaatgg
tgtaaaatgttcagtgcaagatactttgaaaccagcgctaaggaagcaagcaacgtagag
gaggcattcctggaagccatcaaattagccttaaactatcaccaggagcctgaccagaac
tgggagaccaaggtagtgaacttgtctcctccgagcaatagcaagaaatgtgactgttag
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