KEGG   Xenopus laevis (African clawed frog): 108700004
Entry
108700004         CDS       T01010                                 
Symbol
MGC75872.S
Name
(RefSeq) ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04137  Mitophagy - animal
xla04140  Autophagy - animal
xla04144  Endocytosis
xla04145  Phagosome
xla04148  Efferocytosis
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108700004 (MGC75872.S)
   04145 Phagosome
    108700004 (MGC75872.S)
   04140 Autophagy - animal
    108700004 (MGC75872.S)
   04137 Mitophagy - animal
    108700004 (MGC75872.S)
   04148 Efferocytosis
    108700004 (MGC75872.S)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108700004 (MGC75872.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    108700004 (MGC75872.S)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    108700004 (MGC75872.S)
   04031 GTP-binding proteins [BR:xla04031]
    108700004 (MGC75872.S)
Membrane trafficking [BR:xla04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    108700004 (MGC75872.S)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108700004 (MGC75872.S)
  Exosomal proteins of other body fluids (saliva and urine)
   108700004 (MGC75872.S)
  Exosomal proteins of colorectal cancer cells
   108700004 (MGC75872.S)
  Exosomal proteins of bladder cancer cells
   108700004 (MGC75872.S)
GTP-binding proteins [BR:xla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    108700004 (MGC75872.S)
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 G-alpha GTP_EFTU AAA_29 cobW AAA_7 RsgA_GTPase FeoB_N AAA_16 GIY_YIG_2 DAP3 AAA_22 MCM AAA_lid_7 CoaE Ploopntkinase3
Other DBs
NCBI-GeneID: 108700004
NCBI-ProteinID: XP_018088317
Xenbase: XB-GENE-6489283
UniProt: A0A1L8F1U3 A0A974C3Z9
LinkDB
Position
8S:37956658..37975233
AA seq 199 aa
MFHRKHIKLLLIGNAGSGKSALMNQYVNCRFTNYYRATIGADFFTKELRVNDKFVTVQIW
DTAGTERFQSLGAALYRGTDCCLLVFDVTSPKSFHALDNWHREFLVQADPISPGSFLFVV
IGNKTDLQERQVSPREAEEWCKMFSARYFETSAKEASNVEEAFLEAIKLALNYHQEPDQN
WETKVVNLSPPSNSKKCDC
NT seq 600 nt   +upstreamnt  +downstreamnt
atgttccacaggaagcacatcaagcttcttctcattgggaatgcaggatcaggaaagtcg
gcactgatgaaccagtatgtcaactgtcggtttaccaactactacagagcgactatcggc
gcagatttcttcacgaaggagttacgggttaatgataagtttgtgacagtgcagatatgg
gacacagcgggcacggagcgcttccagtcattgggtgctgctctctatagaggcacagac
tgttgcctgttggtgtttgacgtgacctcccctaaatccttccatgctctggataactgg
cacagagagttcctggtacaagcggatcccatatctcctggaagcttcctgttcgtggtg
atcggtaacaaaacagacctacaggagcggcaggtttcaccacgggaggcagaggaatgg
tgtaaaatgttcagtgcaagatactttgaaaccagcgctaaggaagcaagcaacgtagag
gaggcattcctggaagccatcaaattagccttaaactatcaccaggagcctgaccagaac
tgggagaccaaggtagtgaacttgtctcctccgagcaatagcaagaaatgtgactgttag

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